RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	MGAT1	P26572	445 aa		11.46	□□□□□ -0.57
PSMC3-205	ENST00000528362	NDUFS1	P28331	727 aa		11.46	□□□□□ -0.57
PSMC3-205	ENST00000528362	PRAME	P78395	509 aa		11.46	□□□□□ -0.57
PSMC3-205	ENST00000528362	CDK16	Q00536	496 aa		11.46	□□□□□ -0.57
PSMC3-205	ENST00000528362	GSTM4	Q03013	218 aa		11.46	□□□□□ -0.57
PSMC3-205	ENST00000528362	KCNJ11	Q14654	390 aa		11.46	□□□□□ -0.57
PSMC3-205	ENST00000528362	TPSAB1	Q15661	275 aa		11.46	□□□□□ -0.57
PSMC3-205	ENST00000528362	LYPLAL1	Q5VWZ2	237 aa		11.46	□□□□□ -0.57
PSMC3-205	ENST00000528362	ANKRD22	Q5VYY1	191 aa		11.46	□□□□□ -0.57
PSMC3-205	ENST00000528362	KLHL35	Q6PF15	583 aa		11.46	□□□□□ -0.57
PSMC3-205	ENST00000528362	CEACAM20	Q6UY09	585 aa		11.46	□□□□□ -0.57
PSMC3-205	ENST00000528362	OR6P1	Q8NGX9	317 aa		11.46	□□□□□ -0.57
PSMC3-205	ENST00000528362	NKD1	Q969G9	470 aa		11.46	□□□□□ -0.57
PSMC3-205	ENST00000528362	SLC41A2	Q96JW4	573 aa		11.46	□□□□□ -0.57
PSMC3-205	ENST00000528362	PDLIM2	Q96JY6	352 aa		11.46	□□□□□ -0.57
PSMC3-205	ENST00000528362	OSBPL9	Q96SU4	736 aa		11.46	□□□□□ -0.57
PSMC3-205	ENST00000528362	BFAR	Q9NZS9	450 aa		11.46	□□□□□ -0.57
PSMC3-205	ENST00000528362	SEMA5B	Q9P283	1151 aa		11.46	□□□□□ -0.57
PSMC3-205	ENST00000528362	MARCH4	Q9P2E8	410 aa	Predicted RBP	11.46	□□□□□ -0.57
PSMC3-205	ENST00000528362	SNX12	Q9UMY4	172 aa		11.46	□□□□□ -0.57
PSMC3-205	ENST00000528362	NEU2	Q9Y3R4	380 aa		11.46	□□□□□ -0.57
PSMC3-205	ENST00000528362	PCDHB11	Q9Y5F2	797 aa		11.46	□□□□□ -0.57
PSMC3-205	ENST00000528362	HEBP2	Q9Y5Z4	205 aa		11.46	□□□□□ -0.57
PSMC3-205	ENST00000528362	COLEC10	Q9Y6Z7	277 aa		11.46	□□□□□ -0.57
PSMC3-205	ENST00000528362	ZNF106	Q9H2Y7	1883 aa	Known RBP	11.46	□□□□□ -0.58
PSMC3-205	ENST00000528362	AP3B1	O00203	1094 aa		11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	QSOX1	O00391	747 aa		11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	IFRD1	O00458	451 aa	Predicted RBP	11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	LIN7A	O14910	233 aa	Predicted RBP	11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	POLR1C	O15160	346 aa	Predicted RBP	11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	ZNF185	O15231	689 aa		11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	ATXN7	O15265	892 aa	Predicted RBP	11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	KIF5C	O60282	957 aa		11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	RAD1	O60671	282 aa		11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	TMEM63A	O94886	807 aa		11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	KRT14	P02533	472 aa		11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	FTH1	P02794	183 aa		11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	NELFE	P18615	380 aa	Known RBP	11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	ARNT	P27540	789 aa		11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	NMBR	P28336	390 aa		11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	COIL	P38432	576 aa	Predicted RBP	11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	ARCN1	P48444	511 aa	Known RBP	11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	CD151	P48509	253 aa		11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	NPY2R	P49146	381 aa		11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	ATP1A2	P50993	1020 aa		11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	TERF1	P54274	439 aa		11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	RHD	Q02161	417 aa		11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	FOXM1	Q08050	763 aa		11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	GPS1	Q13098	491 aa		11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	BOP1	Q14137	746 aa	Known RBP	11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	KRT33B	Q14525	404 aa		11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	FASTKD1	Q53R41	847 aa	Known RBP	11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	MANEA	Q5SRI9	462 aa		11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	KIAA1614	Q5VZ46	1190 aa		11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	LRRC8B	Q6P9F7	803 aa		11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	NAPRT	Q6XQN6	538 aa		11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	CERS6	Q6ZMG9	384 aa		11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	LDB1	Q86U70	411 aa	Predicted RBP	11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	OOSP2	Q86WS3	158 aa		11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	PHC3	Q8NDX5	983 aa		11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	ACVR1C	Q8NER5	493 aa		11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	LKAAEAR1	Q8TD35	194 aa		11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	ACTRT1	Q8TDG2	376 aa		11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	ELMO1	Q92556	727 aa		11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	TTC9	Q92623	222 aa		11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	NAP1L3	Q99457	506 aa	Predicted RBP	11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	CD180	Q99467	661 aa		11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	NRTN	Q99748	197 aa		11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	MAP3K3	Q99759	626 aa		11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	ZPBP	Q9BS86	351 aa		11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	KIFC1	Q9BW19	673 aa		11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	HRASLS2	Q9NWW9	162 aa		11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	SYBU	Q9NX95	663 aa		11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	PILRA	Q9UKJ1	303 aa		11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	PCDHGA4	Q9Y5G9	962 aa		11.45	□□□□□ -0.58
PSMC3-205	ENST00000528362	SLC5A10	A0PJK1	596 aa		11.44	□□□□□ -0.58
PSMC3-205	ENST00000528362	TLCD2	A6NGC4	264 aa		11.44	□□□□□ -0.58
PSMC3-205	ENST00000528362	BHMG1	C9JSJ3	638 aa	Predicted RBP	11.44	□□□□□ -0.58
PSMC3-205	ENST00000528362	ERVH48-1	M5A8F1	160 aa		11.44	□□□□□ -0.58
PSMC3-205	ENST00000528362	STK17B	O94768	372 aa		11.44	□□□□□ -0.58
PSMC3-205	ENST00000528362	DLGAP3	O95886	979 aa		11.44	□□□□□ -0.58
PSMC3-205	ENST00000528362	OR56A5	P0C7T3	313 aa		11.44	□□□□□ -0.58
PSMC3-205	ENST00000528362	ACADL	P28330	430 aa		11.44	□□□□□ -0.58
PSMC3-205	ENST00000528362	KPNA2	P52292	529 aa	Known RBP	11.44	□□□□□ -0.58
PSMC3-205	ENST00000528362	KCNAB1	Q14722	419 aa		11.44	□□□□□ -0.58
PSMC3-205	ENST00000528362	BRD3	Q15059	726 aa		11.44	□□□□□ -0.58
PSMC3-205	ENST00000528362	AARS2	Q5JTZ9	985 aa	Known RBP	11.44	□□□□□ -0.58
PSMC3-205	ENST00000528362	DNTTIP2	Q5QJE6	756 aa	Known RBP	11.44	□□□□□ -0.58
PSMC3-205	ENST00000528362	CCDC137	Q6PK04	289 aa	Known RBP	11.44	□□□□□ -0.58
PSMC3-205	ENST00000528362	CES3	Q6UWW8	571 aa		11.44	□□□□□ -0.58
PSMC3-205	ENST00000528362	TIPARP	Q7Z3E1	657 aa	Known RBP	11.44	□□□□□ -0.58
PSMC3-205	ENST00000528362	CACNA2D3	Q8IZS8	1091 aa		11.44	□□□□□ -0.58
PSMC3-205	ENST00000528362	MPP5	Q8N3R9	675 aa		11.44	□□□□□ -0.58
PSMC3-205	ENST00000528362	OR4E2	Q8NGC2	313 aa		11.44	□□□□□ -0.58
PSMC3-205	ENST00000528362	OR52E1	Q8NGJ3	308 aa		11.44	□□□□□ -0.58
PSMC3-205	ENST00000528362	LCN9	Q8WX39	176 aa		11.44	□□□□□ -0.58
PSMC3-205	ENST00000528362	CPT1B	Q92523	772 aa		11.44	□□□□□ -0.58
PSMC3-205	ENST00000528362	UBXN4	Q92575	508 aa		11.44	□□□□□ -0.58
PSMC3-205	ENST00000528362	TFG	Q92734	400 aa	Predicted RBP	11.44	□□□□□ -0.58
PSMC3-205	ENST00000528362	RNF31	Q96EP0	1072 aa		11.44	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms