RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 STMND1H3BQB6 276 aa25.71■■□□□ 1.71
TSPAN4-217ENST00000527644 LIN7AO14910 233 aaPredicted RBP25.71■■□□□ 1.71
TSPAN4-217ENST00000527644 OR1I1O60431 355 aa25.71■■□□□ 1.71
TSPAN4-217ENST00000527644 PHF2O75151 1096 aa25.71■■□□□ 1.71
TSPAN4-217ENST00000527644 RASSF9O75901 435 aa25.71■■□□□ 1.71
TSPAN4-217ENST00000527644 MGAT1P26572 445 aa25.71■■□□□ 1.71
TSPAN4-217ENST00000527644 ARMC3Q5W041 872 aa25.71■■□□□ 1.71
TSPAN4-217ENST00000527644 ANKS6Q68DC2 871 aa25.71■■□□□ 1.71
TSPAN4-217ENST00000527644 GRK7Q8WTQ7 553 aa25.71■■□□□ 1.71
TSPAN4-217ENST00000527644 ZPBPQ9BS86 351 aa25.71■■□□□ 1.71
TSPAN4-217ENST00000527644 KIFC1Q9BW19 673 aa25.71■■□□□ 1.71
TSPAN4-217ENST00000527644 CATSPERZQ9NTU4 200 aa25.71■■□□□ 1.71
TSPAN4-217ENST00000527644 NEU2Q9Y3R4 380 aa25.71■■□□□ 1.71
TSPAN4-217ENST00000527644 IGSF10Q6WRI0 2623 aa25.7■■□□□ 1.71
TSPAN4-217ENST00000527644 OR5K3A6NET4 321 aa25.7■■□□□ 1.7
TSPAN4-217ENST00000527644 ZNF185O15231 689 aa25.7■■□□□ 1.7
TSPAN4-217ENST00000527644 TCP1P17987 556 aaKnown RBP25.7■■□□□ 1.7
TSPAN4-217ENST00000527644 PDHA2P29803 388 aa25.7■■□□□ 1.7
TSPAN4-217ENST00000527644 FNTAP49354 379 aa25.7■■□□□ 1.7
TSPAN4-217ENST00000527644 TERF1P54274 439 aa25.7■■□□□ 1.7
TSPAN4-217ENST00000527644 VAC14Q08AM6 782 aa25.7■■□□□ 1.7
TSPAN4-217ENST00000527644 CACHD1Q5VU97 1274 aa25.7■■□□□ 1.7
TSPAN4-217ENST00000527644 CEACAM20Q6UY09 585 aa25.7■■□□□ 1.7
TSPAN4-217ENST00000527644 CCDC81Q6ZN84 652 aa25.7■■□□□ 1.7
TSPAN4-217ENST00000527644 FAM92BQ6ZTR7 304 aa25.7■■□□□ 1.7
TSPAN4-217ENST00000527644 SNRNP27Q8WVK2 155 aaKnown RBP25.7■■□□□ 1.7
TSPAN4-217ENST00000527644 FERD3LQ96RJ6 166 aa25.7■■□□□ 1.7
TSPAN4-217ENST00000527644 WDR70Q9NW82 654 aa25.7■■□□□ 1.7
TSPAN4-217ENST00000527644 SYBUQ9NX95 663 aa25.7■■□□□ 1.7
TSPAN4-217ENST00000527644 SIDT1Q9NXL6 827 aaKnown RBP25.7■■□□□ 1.7
TSPAN4-217ENST00000527644 TEX51A0A1B0GUA7 166 aa25.69■■□□□ 1.7
TSPAN4-217ENST00000527644 CD3EAPO15446 510 aaKnown RBP25.69■■□□□ 1.7
TSPAN4-217ENST00000527644 KIF1CO43896 1103 aaKnown RBP25.69■■□□□ 1.7
TSPAN4-217ENST00000527644 NMBRP28336 390 aa25.69■■□□□ 1.7
TSPAN4-217ENST00000527644 PREPP48147 710 aa25.69■■□□□ 1.7
TSPAN4-217ENST00000527644 PLOD1Q02809 727 aaPredicted RBP25.69■■□□□ 1.7
TSPAN4-217ENST00000527644 SEMA3AQ14563 771 aa25.69■■□□□ 1.7
TSPAN4-217ENST00000527644 ARHGAP40Q5TG30 622 aa25.69■■□□□ 1.7
TSPAN4-217ENST00000527644 OOSP2Q86WS3 158 aa25.69■■□□□ 1.7
TSPAN4-217ENST00000527644 ACVR1CQ8NER5 493 aa25.69■■□□□ 1.7
TSPAN4-217ENST00000527644 KLHL6Q8WZ60 621 aa25.69■■□□□ 1.7
TSPAN4-217ENST00000527644 CPT1BQ92523 772 aa25.69■■□□□ 1.7
TSPAN4-217ENST00000527644 ELMO1Q92556 727 aa25.69■■□□□ 1.7
TSPAN4-217ENST00000527644 HRASLS2Q9NWW9 162 aa25.69■■□□□ 1.7
TSPAN4-217ENST00000527644 SEMA5BQ9P283 1151 aa25.69■■□□□ 1.7
TSPAN4-217ENST00000527644 SOX13Q9UN79 622 aa25.69■■□□□ 1.7
TSPAN4-217ENST00000527644 K7ENP7 123 aa25.68■■□□□ 1.7
TSPAN4-217ENST00000527644 POLR1CO15160 346 aaPredicted RBP25.68■■□□□ 1.7
TSPAN4-217ENST00000527644 TTPAP49638 278 aa25.68■■□□□ 1.7
TSPAN4-217ENST00000527644 SEPHS1P49903 392 aa25.68■■□□□ 1.7
TSPAN4-217ENST00000527644 ANKRD22Q5VYY1 191 aa25.68■■□□□ 1.7
TSPAN4-217ENST00000527644 INO80CQ6PI98 192 aaPredicted RBP25.68■■□□□ 1.7
TSPAN4-217ENST00000527644 MCUQ8NE86 351 aa25.68■■□□□ 1.7
TSPAN4-217ENST00000527644 UBXN4Q92575 508 aa25.68■■□□□ 1.7
TSPAN4-217ENST00000527644 TFGQ92734 400 aaPredicted RBP25.68■■□□□ 1.7
TSPAN4-217ENST00000527644 CD180Q99467 661 aa25.68■■□□□ 1.7
TSPAN4-217ENST00000527644 CTRCQ99895 268 aa25.68■■□□□ 1.7
TSPAN4-217ENST00000527644 MVB12BQ9H7P6 319 aa25.68■■□□□ 1.7
TSPAN4-217ENST00000527644 MLNP12872 115 aa25.67■■□□□ 1.7
TSPAN4-217ENST00000527644 GNG11P61952 73 aa25.67■■□□□ 1.7
TSPAN4-217ENST00000527644 PPP1CAP62136 330 aa25.67■■□□□ 1.7
TSPAN4-217ENST00000527644 SDK2Q58EX2 2172 aa25.67■■□□□ 1.7
TSPAN4-217ENST00000527644 MANEAQ5SRI9 462 aa25.67■■□□□ 1.7
TSPAN4-217ENST00000527644 ARMC6Q6NXE6 501 aa25.67■■□□□ 1.7
TSPAN4-217ENST00000527644 CAND1Q86VP6 1230 aaKnown RBP25.67■■□□□ 1.7
TSPAN4-217ENST00000527644 MPP5Q8N3R9 675 aa25.67■■□□□ 1.7
TSPAN4-217ENST00000527644 MFSD3Q96ES6 412 aa25.67■■□□□ 1.7
TSPAN4-217ENST00000527644 TSSK1BQ9BXA7 367 aa25.67■■□□□ 1.7
TSPAN4-217ENST00000527644 APMAPQ9HDC9 416 aa25.67■■□□□ 1.7
TSPAN4-217ENST00000527644 MARCH4Q9P2E8 410 aaPredicted RBP25.67■■□□□ 1.7
TSPAN4-217ENST00000527644 SLC5A10A0PJK1 596 aa25.66■■□□□ 1.7
TSPAN4-217ENST00000527644 OR6C74A6NCV1 312 aa25.66■■□□□ 1.7
TSPAN4-217ENST00000527644 AVILO75366 819 aa25.66■■□□□ 1.7
TSPAN4-217ENST00000527644 TMEM63AO94886 807 aa25.66■■□□□ 1.7
TSPAN4-217ENST00000527644 NELFEP18615 380 aaKnown RBP25.66■■□□□ 1.7
TSPAN4-217ENST00000527644 ATP1A2P50993 1020 aa25.66■■□□□ 1.7
TSPAN4-217ENST00000527644 FOXM1Q08050 763 aa25.66■■□□□ 1.7
TSPAN4-217ENST00000527644 SYTL3Q4VX76 610 aa25.66■■□□□ 1.7
TSPAN4-217ENST00000527644 DNTTIP2Q5QJE6 756 aaKnown RBP25.66■■□□□ 1.7
TSPAN4-217ENST00000527644 LDB1Q86U70 411 aaPredicted RBP25.66■■□□□ 1.7
TSPAN4-217ENST00000527644 PHC3Q8NDX5 983 aa25.66■■□□□ 1.7
TSPAN4-217ENST00000527644 OR4E2Q8NGC2 313 aa25.66■■□□□ 1.7
TSPAN4-217ENST00000527644 LCN9Q8WX39 176 aa25.66■■□□□ 1.7
TSPAN4-217ENST00000527644 UBL7Q96S82 380 aaPredicted RBP25.66■■□□□ 1.7
TSPAN4-217ENST00000527644 CARD6Q9BX69 1037 aa25.66■■□□□ 1.7
TSPAN4-217ENST00000527644 SPRY4Q9C004 299 aa25.66■■□□□ 1.7
TSPAN4-217ENST00000527644 TFB2MQ9H5Q4 396 aaKnown RBP25.66■■□□□ 1.7
TSPAN4-217ENST00000527644 XAB2Q9HCS7 855 aaKnown RBP25.66■■□□□ 1.7
TSPAN4-217ENST00000527644 PYCARDQ9ULZ3 195 aa25.66■■□□□ 1.7
TSPAN4-217ENST00000527644 CACNA1GO43497 2377 aa25.65■■□□□ 1.7
TSPAN4-217ENST00000527644 PRMT5O14744 637 aaPredicted RBP25.65■■□□□ 1.7
TSPAN4-217ENST00000527644 EFSO43281 561 aa25.65■■□□□ 1.7
TSPAN4-217ENST00000527644 VAPBO95292 243 aa25.65■■□□□ 1.7
TSPAN4-217ENST00000527644 BOP1Q14137 746 aaKnown RBP25.65■■□□□ 1.7
TSPAN4-217ENST00000527644 BRD3Q15059 726 aa25.65■■□□□ 1.7
TSPAN4-217ENST00000527644 PAPD7Q5XG87 772 aaKnown RBP25.65■■□□□ 1.7
TSPAN4-217ENST00000527644 CES3Q6UWW8 571 aa25.65■■□□□ 1.7
TSPAN4-217ENST00000527644 KMT5CQ86Y97 462 aa25.65■■□□□ 1.7
TSPAN4-217ENST00000527644 NKD1Q969G9 470 aa25.65■■□□□ 1.7
TSPAN4-217ENST00000527644 SLC41A2Q96JW4 573 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms