RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 RPL38P63173 70 aaKnown RBP7.15□□□□□ -1.26
CTNND1-216ENST00000527467 PLEKHN1Q494U1 663 aaPredicted RBP7.15□□□□□ -1.26
CTNND1-216ENST00000527467 CST9Q5W186 159 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 ALG1LQ6GMV1 187 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 C17orf99Q6UX52 265 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 CXCL17Q6UXB2 119 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 SLC9B2Q86UD5 537 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 SKA3Q8IX90 412 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 OR56B2PQ8NGI1 322 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 AHCYL2Q96HN2 611 aaKnown RBP7.15□□□□□ -1.26
CTNND1-216ENST00000527467 HPDLQ96IR7 371 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 KCTD15Q96SI1 283 aaPredicted RBP7.15□□□□□ -1.26
CTNND1-216ENST00000527467 TTLL2Q9BWV7 592 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 GJB4Q9NTQ9 266 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 TMEM260Q9NX78 707 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 PLAGL2Q9UPG8 496 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 DOT1LQ8TEK3 1739 aa7.15□□□□□ -1.26
CTNND1-216ENST00000527467 OR6C65A6NJZ3 312 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 CPSF4LA6NMK7 179 aaKnown RBP7.15□□□□□ -1.27
CTNND1-216ENST00000527467 RBAK-RBAKDNI3L0D1 243 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 ATG13O75143 517 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 ASGR1P07306 291 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 HCKP08631 526 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 MGAT1P26572 445 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 PTPN9P43378 593 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 NAE1Q13564 534 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 CUL2Q13617 745 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 EIF2B1Q14232 305 aaKnown RBP7.15□□□□□ -1.27
CTNND1-216ENST00000527467 PFKFB4Q16877 469 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 ZNF674Q2M3X9 581 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 SLC9B1Q4ZJI4 515 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 KLHL22Q53GT1 634 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 ATXN7L2Q5T6C5 722 aaPredicted RBP7.15□□□□□ -1.27
CTNND1-216ENST00000527467 RETSATQ6NUM9 610 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 FAM199XQ6PEV8 388 aaPredicted RBP7.15□□□□□ -1.27
CTNND1-216ENST00000527467 PIWIL4Q7Z3Z4 852 aaKnown RBP7.15□□□□□ -1.27
CTNND1-216ENST00000527467 MCEMP1Q8IX19 187 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 ACTL9Q8TC94 416 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 SMARCD2Q92925 531 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 OTUB2Q96DC9 234 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 TXN2Q99757 166 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 CIB1Q99828 191 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 GAL3ST1Q99999 423 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 TMEM246Q9BRR3 403 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 SPG21Q9NZD8 308 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 MTRRQ9UBK8 725 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 EGFL7Q9UHF1 273 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 RAP2CQ9Y3L5 183 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 ZNF175Q9Y473 711 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 PCDHGB2Q9Y5G2 931 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 U3KQV3 271 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 TNFRSF11BO00300 401 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 PCDH8O95206 1070 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 PLEKP08567 350 aaPredicted RBP7.15□□□□□ -1.27
CTNND1-216ENST00000527467 ANXA3P12429 323 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 GZMAP12544 262 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 ITPKBP27987 946 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 SSTR1P30872 391 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 RYKP34925 604 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 NCS1P62166 190 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 RNF4P78317 190 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 EEF1A2Q05639 463 aaKnown RBP7.15□□□□□ -1.27
CTNND1-216ENST00000527467 SLC13A2Q13183 592 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 SGCGQ13326 291 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 ADAM15Q13444 863 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 SPIN3Q5JUX0 258 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 C6orf52Q5T4I8 152 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 C3orf33Q6P1S2 294 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 FBXO16Q8IX29 292 aaPredicted RBP7.15□□□□□ -1.27
CTNND1-216ENST00000527467 TMEM192Q8IY95 271 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 PTGR2Q8N8N7 351 aaPredicted RBP7.15□□□□□ -1.27
CTNND1-216ENST00000527467 BSNDQ8WZ55 320 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 C7orf34Q96L11 122 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 TMEM47Q9BQJ4 181 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 NSUN3Q9H649 340 aaKnown RBP7.15□□□□□ -1.27
CTNND1-216ENST00000527467 RANBP3Q9H6Z4 567 aaPredicted RBP7.15□□□□□ -1.27
CTNND1-216ENST00000527467 KCNQ5Q9NR82 932 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 PCDHB16Q9NRJ7 776 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 HCN3Q9P1Z3 774 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 PRDM4Q9UKN5 801 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 PCDHGA8Q9Y5G5 932 aa7.15□□□□□ -1.27
CTNND1-216ENST00000527467 NRCAMQ92823 1304 aa7.14□□□□□ -1.27
CTNND1-216ENST00000527467 PSMD9O00233 223 aa7.14□□□□□ -1.27
CTNND1-216ENST00000527467 FAM86B2P0C5J1 330 aa7.14□□□□□ -1.27
CTNND1-216ENST00000527467 CYP3A5P20815 502 aa7.14□□□□□ -1.27
CTNND1-216ENST00000527467 ACO1P21399 889 aaKnown RBP7.14□□□□□ -1.27
CTNND1-216ENST00000527467 ADH6P28332 368 aa7.14□□□□□ -1.27
CTNND1-216ENST00000527467 OR1G1P47890 313 aa7.14□□□□□ -1.27
CTNND1-216ENST00000527467 FABP6P51161 128 aa7.14□□□□□ -1.27
CTNND1-216ENST00000527467 NRLP54845 237 aa7.14□□□□□ -1.27
CTNND1-216ENST00000527467 CDH13P55290 713 aa7.14□□□□□ -1.27
CTNND1-216ENST00000527467 E2F1Q01094 437 aa7.14□□□□□ -1.27
CTNND1-216ENST00000527467 PCBP1Q15365 356 aaKnown RBP eCLIP7.14□□□□□ -1.274e-9■■■□□ 19
CTNND1-216ENST00000527467 CNPY1Q3B7I2 92 aa7.14□□□□□ -1.27
CTNND1-216ENST00000527467 PPP1R15BQ5SWA1 713 aa7.14□□□□□ -1.27
CTNND1-216ENST00000527467 TAPT1Q6NXT6 567 aa7.14□□□□□ -1.27
CTNND1-216ENST00000527467 MSANTD2Q6P1R3 559 aa7.14□□□□□ -1.27
CTNND1-216ENST00000527467 C3orf67Q6ZVT6 689 aa7.14□□□□□ -1.27
CTNND1-216ENST00000527467 PDZD9Q8IXQ8 264 aa7.14□□□□□ -1.27
CTNND1-216ENST00000527467 RBM12BQ8IXT5 1001 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms