RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 MYO15AQ9UKN7 3530 aa12.32□□□□□ -0.44
CAPN1-208ENST00000527323 LCHNA4D1U4 455 aa12.32□□□□□ -0.44
CAPN1-208ENST00000527323 RAMP2O60895 175 aa12.32□□□□□ -0.44
CAPN1-208ENST00000527323 G6PDP11413 515 aa12.32□□□□□ -0.44
CAPN1-208ENST00000527323 PRKACGP22612 351 aa12.32□□□□□ -0.44
CAPN1-208ENST00000527323 RPL9P32969 192 aaKnown RBP12.32□□□□□ -0.44
CAPN1-208ENST00000527323 CD300CQ08708 224 aa12.32□□□□□ -0.44
CAPN1-208ENST00000527323 RAP1GAP2Q684P5 730 aa12.32□□□□□ -0.44
CAPN1-208ENST00000527323 GTF2IRD2BQ6EKJ0 949 aa12.32□□□□□ -0.44
CAPN1-208ENST00000527323 CD300LGQ6UXG3 332 aa12.32□□□□□ -0.44
CAPN1-208ENST00000527323 SLCO6A1Q86UG4 719 aa12.32□□□□□ -0.44
CAPN1-208ENST00000527323 GTF2IRD2Q86UP8 949 aa12.32□□□□□ -0.44
CAPN1-208ENST00000527323 ZFAND4Q86XD8 727 aa12.32□□□□□ -0.44
CAPN1-208ENST00000527323 GPSM1Q86YR5 675 aa12.32□□□□□ -0.44
CAPN1-208ENST00000527323 MIB1Q86YT6 1006 aa12.32□□□□□ -0.44
CAPN1-208ENST00000527323 GIPC2Q8TF65 315 aa12.32□□□□□ -0.44
CAPN1-208ENST00000527323 TRIM43Q96BQ3 446 aaPredicted RBP12.32□□□□□ -0.44
CAPN1-208ENST00000527323 RPRD1AQ96P16 312 aaPredicted RBP12.32□□□□□ -0.44
CAPN1-208ENST00000527323 BRINP2Q9C0B6 783 aa12.32□□□□□ -0.44
CAPN1-208ENST00000527323 POLR1EQ9GZS1 481 aaKnown RBP12.32□□□□□ -0.44
CAPN1-208ENST00000527323 ADGRE2Q9UHX3 823 aa12.32□□□□□ -0.44
CAPN1-208ENST00000527323 MYLKQ15746 1914 aa12.32□□□□□ -0.44
CAPN1-208ENST00000527323 KRBA1A5PL33 1030 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 M0R3G1 203 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 KATNA1O75449 491 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 INMTO95050 263 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 FGF1P05230 155 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 RPS17P08708 135 aaKnown RBP12.31□□□□□ -0.44
CAPN1-208ENST00000527323 PRR35P0CG20 571 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 HLA-DPA1P20036 260 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 IDUAP35475 653 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 SUOXP51687 545 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 IL1RL1Q01638 556 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 KCNAB2Q13303 367 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 AQP6Q13520 282 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 CRY1Q16526 586 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 AAK1Q2M2I8 961 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 ENPP6Q6UWR7 440 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 BEND5Q7L4P6 421 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 SNX29P2Q8IUI4 249 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 FAM86B1Q8N7N1 296 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 OR2T12Q8NG77 320 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 GPR150Q8NGU9 434 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 BCL7CQ8WUZ0 217 aaPredicted RBP12.31□□□□□ -0.44
CAPN1-208ENST00000527323 FAM162AQ96A26 154 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 PCTPQ9UKL6 214 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 OGDHLQ9ULD0 1010 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 B3GNT3Q9Y2A9 372 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 USP34Q70CQ2 3546 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 KDM1AO60341 852 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 OGNP20774 298 aaKnown RBP12.31□□□□□ -0.44
CAPN1-208ENST00000527323 HTR1BP28222 390 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 CD47Q08722 323 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 MAPRE1Q15691 268 aaKnown RBP12.31□□□□□ -0.44
CAPN1-208ENST00000527323 SLC39A12Q504Y0 691 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 MS4A13Q5J8X5 152 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 SCML4Q8N228 414 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 CHDHQ8NE62 594 aaPredicted RBP12.31□□□□□ -0.44
CAPN1-208ENST00000527323 OR4K2Q8NGD2 314 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 OR52B6Q8NGF0 335 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 OR10A6Q8NH74 314 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 NCLNQ969V3 563 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 NODALQ96S42 347 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 U3KQV3 271 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 WDR87Q6ZQQ6 2873 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 TRANK1O15050 2925 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 WASH4PA8MWX3 477 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 GNRH1P01148 92 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 NPPAP01160 153 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 OR1E1P30953 314 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 ACVRL1P37023 503 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 PIGAP37287 484 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 OXCT1P55809 520 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 XKR7Q5GH72 579 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 TXNDC11Q6PKC3 985 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 RSPO2Q6UXX9 243 aaPredicted RBP12.31□□□□□ -0.44
CAPN1-208ENST00000527323 DLEU7Q6UYE1 221 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 DNAJC14Q6Y2X3 702 aaPredicted RBP12.31□□□□□ -0.44
CAPN1-208ENST00000527323 Q6ZSR9 355 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 FRA10AC1Q70Z53 315 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 ZNF598Q86UK7 904 aaKnown RBP12.31□□□□□ -0.44
CAPN1-208ENST00000527323 PARP8Q8N3A8 854 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 NKAPQ8N5F7 415 aaKnown RBP12.31□□□□□ -0.44
CAPN1-208ENST00000527323 SIDT2Q8NBJ9 832 aaKnown RBP12.31□□□□□ -0.44
CAPN1-208ENST00000527323 IGSF8Q969P0 613 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 C1orf74Q96LT6 269 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 SAGE1Q9NXZ1 904 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 DNAJB9Q9UBS3 223 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 TRMT6Q9UJA5 497 aaKnown RBP12.31□□□□□ -0.44
CAPN1-208ENST00000527323 CPQQ9Y646 472 aa12.31□□□□□ -0.44
CAPN1-208ENST00000527323 ADAM12O43184 909 aa12.3□□□□□ -0.44
CAPN1-208ENST00000527323 NDUFS2O75306 463 aa12.3□□□□□ -0.44
CAPN1-208ENST00000527323 VPS26AO75436 327 aa12.3□□□□□ -0.44
CAPN1-208ENST00000527323 TBX18O95935 607 aa12.3□□□□□ -0.44
CAPN1-208ENST00000527323 CAPN1P07384 714 aa12.3□□□□□ -0.44
CAPN1-208ENST00000527323 SERPINF2P08697 491 aa12.3□□□□□ -0.44
CAPN1-208ENST00000527323 GGT1P19440 569 aa12.3□□□□□ -0.44
CAPN1-208ENST00000527323 ALDH4A1P30038 563 aa12.3□□□□□ -0.44
CAPN1-208ENST00000527323 AP5B1Q2VPB7 878 aa12.3□□□□□ -0.44
CAPN1-208ENST00000527323 PAGE2BQ5JRK9 111 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms