RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 IMPDH1P20839 514 aa18.45■□□□□ 0.54
SMPD1-203ENST00000527275 HNRNPA2B1P22626 353 aaKnown RBP18.45■□□□□ 0.54
SMPD1-203ENST00000527275 CLDN2P57739 230 aa18.45■□□□□ 0.54
SMPD1-203ENST00000527275 UBAP2LQ14157 1087 aaKnown RBP18.45■□□□□ 0.54
SMPD1-203ENST00000527275 OR4D1Q15615 310 aa18.45■□□□□ 0.54
SMPD1-203ENST00000527275 TBCCQ15814 346 aa18.45■□□□□ 0.54
SMPD1-203ENST00000527275 PACS2Q86VP3 889 aa18.45■□□□□ 0.54
SMPD1-203ENST00000527275 NKAPQ8N5F7 415 aaKnown RBP18.45■□□□□ 0.54
SMPD1-203ENST00000527275 DEFB119Q8N690 84 aa18.45■□□□□ 0.54
SMPD1-203ENST00000527275 KCNJ9Q92806 393 aa18.45■□□□□ 0.54
SMPD1-203ENST00000527275 COX14Q96I36 57 aa18.45■□□□□ 0.54
SMPD1-203ENST00000527275 TEX101Q9BY14 249 aa18.45■□□□□ 0.54
SMPD1-203ENST00000527275 DERL2Q9GZP9 239 aa18.45■□□□□ 0.54
SMPD1-203ENST00000527275 PRMT8Q9NR22 394 aaPredicted RBP18.45■□□□□ 0.54
SMPD1-203ENST00000527275 VTI1BQ9UEU0 232 aa18.45■□□□□ 0.54
SMPD1-203ENST00000527275 GNPTGQ9UJJ9 305 aa18.45■□□□□ 0.54
SMPD1-203ENST00000527275 KNL1Q8NG31 2342 aa18.44■□□□□ 0.54
SMPD1-203ENST00000527275 OR2AG2A6NM03 316 aa18.44■□□□□ 0.54
SMPD1-203ENST00000527275 PRR5-ARHGAP8B1AHC4 643 aa18.44■□□□□ 0.54
SMPD1-203ENST00000527275 CFAP99D6REC4 459 aa18.44■□□□□ 0.54
SMPD1-203ENST00000527275 H0Y8X5 98 aa18.44■□□□□ 0.54
SMPD1-203ENST00000527275 GRID2O43424 1007 aa18.44■□□□□ 0.54
SMPD1-203ENST00000527275 LAMTOR5O43504 91 aa18.44■□□□□ 0.54
SMPD1-203ENST00000527275 NDUFS2O75306 463 aa18.44■□□□□ 0.54
SMPD1-203ENST00000527275 TPBGLP0DKB5 382 aa18.44■□□□□ 0.54
SMPD1-203ENST00000527275 HOXA6P31267 233 aa18.44■□□□□ 0.54
SMPD1-203ENST00000527275 CCR5P51681 352 aa18.44■□□□□ 0.54
SMPD1-203ENST00000527275 ARHGAP8P85298 464 aa18.44■□□□□ 0.54
SMPD1-203ENST00000527275 USP39Q53GS9 565 aaKnown RBP18.44■□□□□ 0.54
SMPD1-203ENST00000527275 MACC1Q6ZN28 852 aa18.44■□□□□ 0.54
SMPD1-203ENST00000527275 C1orf210Q8IVY1 113 aa18.44■□□□□ 0.54
SMPD1-203ENST00000527275 RASGEF1AQ8N9B8 481 aa18.44■□□□□ 0.54
SMPD1-203ENST00000527275 TBC1D10AQ9BXI6 508 aa18.44■□□□□ 0.54
SMPD1-203ENST00000527275 OR2AG1Q9H205 316 aa18.44■□□□□ 0.54
SMPD1-203ENST00000527275 TRIM39Q9HCM9 518 aa18.44■□□□□ 0.54
SMPD1-203ENST00000527275 TRMT6Q9UJA5 497 aaKnown RBP18.44■□□□□ 0.54
SMPD1-203ENST00000527275 MGRN1O60291 552 aa18.44■□□□□ 0.54
SMPD1-203ENST00000527275 CDK14O94921 469 aa18.44■□□□□ 0.54
SMPD1-203ENST00000527275 ENO1P06733 434 aaKnown RBP18.44■□□□□ 0.54
SMPD1-203ENST00000527275 ATP6V0D1P61421 351 aa18.44■□□□□ 0.54
SMPD1-203ENST00000527275 MAML2Q8IZL2 1156 aaPredicted RBP18.44■□□□□ 0.54
SMPD1-203ENST00000527275 SIDT2Q8NBJ9 832 aaKnown RBP18.44■□□□□ 0.54
SMPD1-203ENST00000527275 STAG3L4Q8TBR4 150 aa18.44■□□□□ 0.54
SMPD1-203ENST00000527275 UTP4Q969X6 686 aaKnown RBP18.44■□□□□ 0.54
SMPD1-203ENST00000527275 KIAA1191Q96A73 305 aa18.44■□□□□ 0.54
SMPD1-203ENST00000527275 SLC30A3Q99726 388 aa18.44■□□□□ 0.54
SMPD1-203ENST00000527275 EML4Q9HC35 981 aaKnown RBP18.44■□□□□ 0.54
SMPD1-203ENST00000527275 ATXN10Q9UBB4 475 aa18.44■□□□□ 0.54
SMPD1-203ENST00000527275 TMEM98Q9Y2Y6 226 aa18.44■□□□□ 0.54
SMPD1-203ENST00000527275 E5RI56 91 aa18.43■□□□□ 0.54
SMPD1-203ENST00000527275 SGTAO43765 313 aa18.43■□□□□ 0.54
SMPD1-203ENST00000527275 TRIM16O95361 564 aa18.43■□□□□ 0.54
SMPD1-203ENST00000527275 ITGB6P18564 788 aa18.43■□□□□ 0.54
SMPD1-203ENST00000527275 TEAD1P28347 426 aa18.43■□□□□ 0.54
SMPD1-203ENST00000527275 CTSCP53634 463 aa18.43■□□□□ 0.54
SMPD1-203ENST00000527275 NFKB2Q00653 900 aa18.43■□□□□ 0.54
SMPD1-203ENST00000527275 RPL6Q02878 288 aaKnown RBP18.43■□□□□ 0.54
SMPD1-203ENST00000527275 ADGRG6Q86SQ4 1221 aa18.43■□□□□ 0.54
SMPD1-203ENST00000527275 BEND7Q8N7W2 519 aaPredicted RBP18.43■□□□□ 0.54
SMPD1-203ENST00000527275 DENND6BQ8NEG7 585 aa18.43■□□□□ 0.54
SMPD1-203ENST00000527275 LKAAEAR1Q8TD35 194 aa18.43■□□□□ 0.54
SMPD1-203ENST00000527275 EXT2Q93063 718 aa18.43■□□□□ 0.54
SMPD1-203ENST00000527275 SPACA7Q96KW9 195 aa18.43■□□□□ 0.54
SMPD1-203ENST00000527275 BMFQ96LC9 184 aa18.43■□□□□ 0.54
SMPD1-203ENST00000527275 ATOH8Q96SQ7 321 aa18.43■□□□□ 0.54
SMPD1-203ENST00000527275 BTBD10Q9BSF8 475 aa18.43■□□□□ 0.54
SMPD1-203ENST00000527275 SARS2Q9NP81 518 aaKnown RBP18.43■□□□□ 0.54
SMPD1-203ENST00000527275 FPGTO14772 594 aa18.42■□□□□ 0.54
SMPD1-203ENST00000527275 NCF2P19878 526 aaPredicted RBP18.42■□□□□ 0.54
SMPD1-203ENST00000527275 FNTBP49356 437 aa18.42■□□□□ 0.54
SMPD1-203ENST00000527275 SH2D4BQ5SQS7 431 aa18.42■□□□□ 0.54
SMPD1-203ENST00000527275 ZNF678Q5SXM1 525 aa18.42■□□□□ 0.54
SMPD1-203ENST00000527275 DOK6Q6PKX4 331 aa18.42■□□□□ 0.54
SMPD1-203ENST00000527275 LONP2Q86WA8 852 aa18.42■□□□□ 0.54
SMPD1-203ENST00000527275 TMEM145Q8NBT3 493 aa18.42■□□□□ 0.54
SMPD1-203ENST00000527275 SNX19Q92543 992 aa18.42■□□□□ 0.54
SMPD1-203ENST00000527275 L3HYPDHQ96EM0 354 aa18.42■□□□□ 0.54
SMPD1-203ENST00000527275 NUF2Q9BZD4 464 aa18.42■□□□□ 0.54
SMPD1-203ENST00000527275 TCF7L2Q9NQB0 619 aa18.42■□□□□ 0.54
SMPD1-203ENST00000527275 TAGLN3Q9UI15 199 aa18.42■□□□□ 0.54
SMPD1-203ENST00000527275 CCDC163A0A0D9SF12 145 aa18.42■□□□□ 0.54
SMPD1-203ENST00000527275 UBXN8O00124 270 aa18.42■□□□□ 0.54
SMPD1-203ENST00000527275 OR56A5P0C7T3 313 aa18.42■□□□□ 0.54
SMPD1-203ENST00000527275 TDGF1P13385 188 aa18.42■□□□□ 0.54
SMPD1-203ENST00000527275 MTHFD2P13995 350 aa18.42■□□□□ 0.54
SMPD1-203ENST00000527275 BCKDHBP21953 392 aa18.42■□□□□ 0.54
SMPD1-203ENST00000527275 CLCN7P51798 805 aa18.42■□□□□ 0.54
SMPD1-203ENST00000527275 METTL21CQ5VZV1 264 aa18.42■□□□□ 0.54
SMPD1-203ENST00000527275 UGT3A1Q6NUS8 523 aa18.42■□□□□ 0.54
SMPD1-203ENST00000527275 FRMD7Q6ZUT3 714 aa18.42■□□□□ 0.54
SMPD1-203ENST00000527275 RPS27LQ71UM5 84 aaKnown RBP18.42■□□□□ 0.54
SMPD1-203ENST00000527275 PARP9Q8IXQ6 854 aa18.42■□□□□ 0.54
SMPD1-203ENST00000527275 GIMAP7Q8NHV1 300 aa18.42■□□□□ 0.54
SMPD1-203ENST00000527275 CD200R1Q8TD46 325 aa18.42■□□□□ 0.54
SMPD1-203ENST00000527275 OR52B2Q96RD2 323 aa18.42■□□□□ 0.54
SMPD1-203ENST00000527275 APOOQ9BUR5 198 aa18.42■□□□□ 0.54
SMPD1-203ENST00000527275 ZCCHC2Q9C0B9 1178 aaKnown RBP18.42■□□□□ 0.54
SMPD1-203ENST00000527275 EPHX3Q9H6B9 360 aa18.42■□□□□ 0.54
SMPD1-203ENST00000527275 WDR55Q9H6Y2 383 aaPredicted RBP18.42■□□□□ 0.54
SMPD1-203ENST00000527275 PHPT1Q9NRX4 125 aaPredicted RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms