RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 STN1Q9H668 368 aaKnown RBP12.64□□□□□ -0.39
SMPD1-202ENST00000526280 SLC40A1Q9NP59 571 aa12.64□□□□□ -0.39
SMPD1-202ENST00000526280 LATS2Q9NRM7 1088 aa12.64□□□□□ -0.39
SMPD1-202ENST00000526280 POT1Q9NUX5 634 aa12.64□□□□□ -0.39
SMPD1-202ENST00000526280 FAM53CQ9NYF3 392 aa12.64□□□□□ -0.39
SMPD1-202ENST00000526280 ZFATQ9P243 1243 aa12.64□□□□□ -0.39
SMPD1-202ENST00000526280 CDYLQ9Y232 598 aa12.64□□□□□ -0.39
SMPD1-202ENST00000526280 COMMD10Q9Y6G5 202 aa12.64□□□□□ -0.39
SMPD1-202ENST00000526280 UNC13CQ8NB66 2214 aa12.64□□□□□ -0.39
SMPD1-202ENST00000526280 PRAMEF33A0A0G2JMD5 474 aa12.63□□□□□ -0.39
SMPD1-202ENST00000526280 B4GAT1O43505 415 aa12.63□□□□□ -0.39
SMPD1-202ENST00000526280 ATP8B1O43520 1251 aa12.63□□□□□ -0.39
SMPD1-202ENST00000526280 NIPSNAP2O75323 286 aa12.63□□□□□ -0.39
SMPD1-202ENST00000526280 SPAG6O75602 509 aa12.63□□□□□ -0.39
SMPD1-202ENST00000526280 C1QAP02745 245 aa12.63□□□□□ -0.39
SMPD1-202ENST00000526280 APOA4P06727 396 aa12.63□□□□□ -0.39
SMPD1-202ENST00000526280 MTHFD1P11586 935 aaKnown RBP12.63□□□□□ -0.39
SMPD1-202ENST00000526280 CHRM3P20309 590 aa12.63□□□□□ -0.39
SMPD1-202ENST00000526280 ACADLP28330 430 aa12.63□□□□□ -0.39
SMPD1-202ENST00000526280 ALDH4A1P30038 563 aa12.63□□□□□ -0.39
SMPD1-202ENST00000526280 CCL7P80098 99 aa12.63□□□□□ -0.39
SMPD1-202ENST00000526280 INSM1Q01101 510 aaPredicted RBP12.63□□□□□ -0.39
SMPD1-202ENST00000526280 HSPA14Q0VDF9 509 aa12.63□□□□□ -0.39
SMPD1-202ENST00000526280 KYNUQ16719 465 aa12.63□□□□□ -0.39
SMPD1-202ENST00000526280 SYTL3Q4VX76 610 aa12.63□□□□□ -0.39
SMPD1-202ENST00000526280 OTOAQ7RTW8 1153 aa12.63□□□□□ -0.39
SMPD1-202ENST00000526280 SPRED1Q7Z699 444 aa12.63□□□□□ -0.39
SMPD1-202ENST00000526280 RAB44Q7Z6P3 723 aaPredicted RBP12.63□□□□□ -0.39
SMPD1-202ENST00000526280 PDZD3Q86UT5 571 aa12.63□□□□□ -0.39
SMPD1-202ENST00000526280 SLC26A11Q86WA9 606 aa12.63□□□□□ -0.39
SMPD1-202ENST00000526280 RBM12BQ8IXT5 1001 aaKnown RBP12.63□□□□□ -0.39
SMPD1-202ENST00000526280 Q8N9G6 341 aaPredicted RBP12.63□□□□□ -0.39
SMPD1-202ENST00000526280 EIF1ADQ8N9N8 165 aaKnown RBP12.63□□□□□ -0.39
SMPD1-202ENST00000526280 KCNJ9Q92806 393 aa12.63□□□□□ -0.39
SMPD1-202ENST00000526280 C12orf66Q96MD2 445 aa12.63□□□□□ -0.39
SMPD1-202ENST00000526280 SLC38A3Q99624 504 aa12.63□□□□□ -0.39
SMPD1-202ENST00000526280 AARSD1Q9BTE6 412 aaKnown RBP12.63□□□□□ -0.39
SMPD1-202ENST00000526280 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.63□□□□□ -0.39
SMPD1-202ENST00000526280 ABCG4Q9H172 646 aa12.63□□□□□ -0.39
SMPD1-202ENST00000526280 CCDC68Q9H2F9 335 aa12.63□□□□□ -0.39
SMPD1-202ENST00000526280 ANKZF1Q9H8Y5 726 aa12.63□□□□□ -0.39
SMPD1-202ENST00000526280 UCK1Q9HA47 277 aa12.63□□□□□ -0.39
SMPD1-202ENST00000526280 SMYD2Q9NRG4 433 aa12.63□□□□□ -0.39
SMPD1-202ENST00000526280 IMP3Q9NV31 184 aaKnown RBP12.63□□□□□ -0.39
SMPD1-202ENST00000526280 KLHL42Q9P2K6 505 aa12.63□□□□□ -0.39
SMPD1-202ENST00000526280 GALPQ9UBC7 116 aa12.63□□□□□ -0.39
SMPD1-202ENST00000526280 MED16Q9Y2X0 877 aa12.63□□□□□ -0.39
SMPD1-202ENST00000526280 PSAT1Q9Y617 370 aa12.63□□□□□ -0.39
SMPD1-202ENST00000526280 CFAP20Q9Y6A4 193 aaKnown RBP12.63□□□□□ -0.39
SMPD1-202ENST00000526280 A0A1W2PQM1 296 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 FAM159BA6NKW6 160 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 CXorf49A8MYA2 514 aaPredicted RBP12.62□□□□□ -0.39
SMPD1-202ENST00000526280 E5RI56 91 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 IFRD1O00458 451 aaPredicted RBP12.62□□□□□ -0.39
SMPD1-202ENST00000526280 NTN3O00634 580 aaPredicted RBP12.62□□□□□ -0.39
SMPD1-202ENST00000526280 CASC3O15234 703 aaKnown RBP12.62□□□□□ -0.39
SMPD1-202ENST00000526280 ZW10O43264 779 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 PIAS1O75925 651 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 TUBBP07437 444 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 CLCN7P51798 805 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 CSE1LP55060 971 aaKnown RBP12.62□□□□□ -0.39
SMPD1-202ENST00000526280 OR1D5P58170 312 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 CBX1P83916 185 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 GBX1Q14549 363 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 TMED2Q15363 201 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 PLEKHS1Q5SXH7 462 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 TMEM26Q6ZUK4 368 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 STRA8Q7Z7C7 330 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 ZNF761Q86XN6 746 aaPredicted RBP12.62□□□□□ -0.39
SMPD1-202ENST00000526280 VRK3Q8IV63 474 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 SLC22A15Q8IZD6 547 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 CHCHD4Q8N4Q1 142 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 WDR48Q8TAF3 677 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 FBF1Q8TES7 1133 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 ZFPM2Q8WW38 1151 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 TFGQ92734 400 aaPredicted RBP12.62□□□□□ -0.39
SMPD1-202ENST00000526280 CDKL2Q92772 493 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 FAM136AQ96C01 138 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 LRRN3Q9H3W5 708 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 NSMCE4AQ9NXX6 385 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 NINJ2Q9NZG7 142 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 RAB21Q9UL25 225 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 HEBP2Q9Y5Z4 205 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 IGHV1OR21-1A0A087WYE8 117 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 CCDC151A5D8V7 595 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 LILRA5A6NI73 299 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 RPLP0P05388 317 aaKnown RBP12.62□□□□□ -0.39
SMPD1-202ENST00000526280 ADRB1P08588 477 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 NDUFS1P28331 727 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 TNFRSF8P28908 595 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 CD1CP29017 333 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 STX2P32856 288 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 ABCG1P45844 678 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 EPHA4P54764 986 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 TIAL1Q01085 375 aaKnown RBP eCLIP12.62□□□□□ -0.39
SMPD1-202ENST00000526280 SQSTM1Q13501 440 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 GPR18Q14330 331 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 SLMAPQ14BN4 828 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 CDCP2Q5VXM1 449 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 DUS1LQ6P1R4 473 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms