RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 MAD1L1Q9Y6D9 718 aa11.67□□□□□ -0.54
CLN8-207ENST00000524258 ZFHX4Q86UP3 3567 aa11.67□□□□□ -0.54
CLN8-207ENST00000524258 URB1O60287 2271 aaKnown RBP11.67□□□□□ -0.54
CLN8-207ENST00000524258 MN1Q10571 1320 aaPredicted RBP11.66□□□□□ -0.54
CLN8-207ENST00000524258 CCDC187A0A096LP49 1063 aa11.66□□□□□ -0.54
CLN8-207ENST00000524258 TLX3O43711 291 aaPredicted RBP11.66□□□□□ -0.54
CLN8-207ENST00000524258 FTH1P02794 183 aa11.66□□□□□ -0.54
CLN8-207ENST00000524258 MPOP05164 745 aa11.66□□□□□ -0.54
CLN8-207ENST00000524258 PPARGP37231 505 aaPredicted RBP11.66□□□□□ -0.54
CLN8-207ENST00000524258 HALP42357 657 aa11.66□□□□□ -0.54
CLN8-207ENST00000524258 CTBP1Q13363 440 aa11.66□□□□□ -0.54
CLN8-207ENST00000524258 FRG1Q14331 258 aaKnown RBP11.66□□□□□ -0.54
CLN8-207ENST00000524258 LONRF1Q17RB8 773 aa11.66□□□□□ -0.54
CLN8-207ENST00000524258 DNAJC21Q5F1R6 531 aaKnown RBP11.66□□□□□ -0.54
CLN8-207ENST00000524258 TRMT10BQ6PF06 316 aaKnown RBP11.66□□□□□ -0.54
CLN8-207ENST00000524258 PDZD3Q86UT5 571 aa11.66□□□□□ -0.54
CLN8-207ENST00000524258 CNTN4Q8IWV2 1026 aa11.66□□□□□ -0.54
CLN8-207ENST00000524258 SLC22A15Q8IZD6 547 aa11.66□□□□□ -0.54
CLN8-207ENST00000524258 PDIK1LQ8N165 341 aa11.66□□□□□ -0.54
CLN8-207ENST00000524258 MMGT1Q8N4V1 131 aa11.66□□□□□ -0.54
CLN8-207ENST00000524258 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.66□□□□□ -0.54
CLN8-207ENST00000524258 NOA1Q8NC60 698 aaKnown RBP11.66□□□□□ -0.54
CLN8-207ENST00000524258 PHC3Q8NDX5 983 aa11.66□□□□□ -0.54
CLN8-207ENST00000524258 JPH3Q8WXH2 748 aaPredicted RBP11.66□□□□□ -0.54
CLN8-207ENST00000524258 RSC1A1Q92681 617 aa11.66□□□□□ -0.54
CLN8-207ENST00000524258 ART4Q93070 314 aa11.66□□□□□ -0.54
CLN8-207ENST00000524258 CXorf40BQ96DE9 158 aa11.66□□□□□ -0.54
CLN8-207ENST00000524258 CCDC74BQ96LY2 380 aa11.66□□□□□ -0.54
CLN8-207ENST00000524258 TMEM74Q96NL1 305 aa11.66□□□□□ -0.54
CLN8-207ENST00000524258 SLC46A1Q96NT5 459 aa11.66□□□□□ -0.54
CLN8-207ENST00000524258 TTC1Q99614 292 aa11.66□□□□□ -0.54
CLN8-207ENST00000524258 DPYSL5Q9BPU6 564 aa11.66□□□□□ -0.54
CLN8-207ENST00000524258 LRRC1Q9BTT6 524 aa11.66□□□□□ -0.54
CLN8-207ENST00000524258 RAB33BQ9H082 229 aa11.66□□□□□ -0.54
CLN8-207ENST00000524258 DPH5Q9H2P9 285 aa11.66□□□□□ -0.54
CLN8-207ENST00000524258 EPB41L1Q9H4G0 881 aa11.66□□□□□ -0.54
CLN8-207ENST00000524258 KIR3DX1Q9H7L2 352 aa11.66□□□□□ -0.54
CLN8-207ENST00000524258 VPS37BQ9H9H4 285 aa11.66□□□□□ -0.54
CLN8-207ENST00000524258 IMP3Q9NV31 184 aaKnown RBP11.66□□□□□ -0.54
CLN8-207ENST00000524258 SLC24A2Q9UI40 661 aa11.66□□□□□ -0.54
CLN8-207ENST00000524258 SATB2Q9UPW6 733 aa11.66□□□□□ -0.54
CLN8-207ENST00000524258 CFAP47Q6ZTR5 3102 aa11.66□□□□□ -0.54
CLN8-207ENST00000524258 TMEM8BA6NDV4 472 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 CDRT15L2A8MXV6 281 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 TMX2-CTNND1H3BSU7 103 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 KIF2AO00139 706 aaPredicted RBP11.65□□□□□ -0.54
CLN8-207ENST00000524258 DUX1O43812 170 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 BRINP1O60477 761 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 NDUFS3O75489 264 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 UBXN7O94888 489 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 TTC4O95801 387 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 C1QAP02745 245 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 SLC35G4P0C7Q5 338 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 ERVK-10P10266 1014 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 TYRP1P17643 537 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 ITGB6P18564 788 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 PAMP19021 973 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 MPSTP25325 297 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 FMO4P31512 558 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 ETV5P41161 510 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 SLC1A2P43004 574 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 GFERP55789 205 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 ARL4CP56559 192 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 PPP1CAP62136 330 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 PLOD1Q02809 727 aaPredicted RBP11.65□□□□□ -0.54
CLN8-207ENST00000524258 TRA2AQ13595 282 aaKnown RBP eCLIP11.65□□□□□ -0.54
CLN8-207ENST00000524258 GRB7Q14451 532 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 BRD3Q15059 726 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 HIF1AQ16665 826 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 MAP9Q49MG5 647 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 HSP90AA5PQ58FG0 334 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 SPANXN3Q5MJ09 141 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 HP1BP3Q5SSJ5 553 aaPredicted RBP11.65□□□□□ -0.54
CLN8-207ENST00000524258 ZNF470Q6ECI4 717 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 SDCCAG8Q86SQ7 713 aaPredicted RBP11.65□□□□□ -0.54
CLN8-207ENST00000524258 PROSER1Q86XN7 944 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 RASGRP3Q8IV61 690 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 TRIM48Q8IWZ4 208 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 LMNTD2Q8IXW0 634 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 BMPERQ8N8U9 685 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 C2CD4AQ8NCU7 369 aaPredicted RBP11.65□□□□□ -0.54
CLN8-207ENST00000524258 OR10G6Q8NH81 332 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 WDR36Q8NI36 951 aaKnown RBP11.65□□□□□ -0.54
CLN8-207ENST00000524258 NCSTNQ92542 709 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 ELMO1Q92556 727 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 TFGQ92734 400 aaPredicted RBP11.65□□□□□ -0.54
CLN8-207ENST00000524258 NXPE2Q96DL1 559 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 SLC30A3Q99726 388 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 NAT9Q9BTE0 207 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 MENTQ9BUN1 341 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 STN1Q9H668 368 aaKnown RBP11.65□□□□□ -0.54
CLN8-207ENST00000524258 CCDC86Q9H6F5 360 aaKnown RBP11.65□□□□□ -0.54
CLN8-207ENST00000524258 SYNDIG1Q9H7V2 258 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 C20orf96Q9NUD7 363 aaPredicted RBP11.65□□□□□ -0.54
CLN8-207ENST00000524258 INTS10Q9NVR2 710 aaKnown RBP11.65□□□□□ -0.54
CLN8-207ENST00000524258 MOCS1Q9NZB8 636 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 FBXO5Q9UKT4 447 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 CRYL1Q9Y2S2 319 aa11.65□□□□□ -0.54
CLN8-207ENST00000524258 PLD2O14939 933 aa11.64□□□□□ -0.55
CLN8-207ENST00000524258 HGSO14964 777 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms