RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 HLA-DPA1P20036 260 aa22.09■■□□□ 1.13
PVT1-218ENST00000523328 MSH3P20585 1137 aa22.09■■□□□ 1.13
PVT1-218ENST00000523328 WASHC5Q12768 1159 aa22.09■■□□□ 1.13
PVT1-218ENST00000523328 SLC1A5Q15758 541 aa22.09■■□□□ 1.13
PVT1-218ENST00000523328 VWA5B1Q5TIE3 1220 aa22.09■■□□□ 1.13
PVT1-218ENST00000523328 ZNF385CQ66K41 422 aaPredicted RBP22.09■■□□□ 1.13
PVT1-218ENST00000523328 RFX6Q8HWS3 928 aa22.09■■□□□ 1.13
PVT1-218ENST00000523328 TICAM1Q8IUC6 712 aa22.09■■□□□ 1.13
PVT1-218ENST00000523328 IQCKQ8N0W5 287 aa22.09■■□□□ 1.13
PVT1-218ENST00000523328 OR4E2Q8NGC2 313 aa22.09■■□□□ 1.13
PVT1-218ENST00000523328 BLOC1S5Q8TDH9 187 aa22.09■■□□□ 1.13
PVT1-218ENST00000523328 FAM8A1Q9UBU6 413 aa22.09■■□□□ 1.13
PVT1-218ENST00000523328 LUC7L2Q9Y383 392 aaKnown RBP22.09■■□□□ 1.13
PVT1-218ENST00000523328 GYPCP04921 128 aa22.08■■□□□ 1.13
PVT1-218ENST00000523328 SLC35G4P0C7Q5 338 aa22.08■■□□□ 1.13
PVT1-218ENST00000523328 AKT1P31749 480 aa22.08■■□□□ 1.13
PVT1-218ENST00000523328 DYNLT1P63172 113 aa22.08■■□□□ 1.13
PVT1-218ENST00000523328 PRKAA1Q13131 559 aa22.08■■□□□ 1.13
PVT1-218ENST00000523328 PTPRCAPQ14761 206 aa22.08■■□□□ 1.13
PVT1-218ENST00000523328 CISD2Q8N5K1 135 aaKnown RBP22.08■■□□□ 1.13
PVT1-218ENST00000523328 LILRA3Q8N6C8 439 aaPredicted RBP22.08■■□□□ 1.13
PVT1-218ENST00000523328 ZNF398Q8TD17 642 aa22.08■■□□□ 1.13
PVT1-218ENST00000523328 OXNAD1Q96HP4 312 aaPredicted RBP22.08■■□□□ 1.13
PVT1-218ENST00000523328 SGSM3Q96HU1 749 aa22.08■■□□□ 1.13
PVT1-218ENST00000523328 RANBP9Q96S59 729 aa22.08■■□□□ 1.13
PVT1-218ENST00000523328 SLC5A6Q9Y289 635 aa22.08■■□□□ 1.13
PVT1-218ENST00000523328 B3GNT3Q9Y2A9 372 aa22.08■■□□□ 1.13
PVT1-218ENST00000523328 PKP3Q9Y446 797 aa22.08■■□□□ 1.13
PVT1-218ENST00000523328 COLEC10Q9Y6Z7 277 aa22.08■■□□□ 1.13
PVT1-218ENST00000523328 ANKRD12Q6UB98 2062 aa22.08■■□□□ 1.12
PVT1-218ENST00000523328 KLHL33A6NCF5 533 aa22.07■■□□□ 1.12
PVT1-218ENST00000523328 SGTAO43765 313 aa22.07■■□□□ 1.12
PVT1-218ENST00000523328 KLF7O75840 302 aaPredicted RBP22.07■■□□□ 1.12
PVT1-218ENST00000523328 ST6GAL1P15907 406 aa22.07■■□□□ 1.12
PVT1-218ENST00000523328 CYP2A7P20853 494 aa22.07■■□□□ 1.12
PVT1-218ENST00000523328 NDUFS1P28331 727 aa22.07■■□□□ 1.12
PVT1-218ENST00000523328 PREPP48147 710 aa22.07■■□□□ 1.12
PVT1-218ENST00000523328 FANCCQ00597 558 aa22.07■■□□□ 1.12
PVT1-218ENST00000523328 ADCY2Q08462 1091 aa22.07■■□□□ 1.12
PVT1-218ENST00000523328 BCL7AQ4VC05 210 aa22.07■■□□□ 1.12
PVT1-218ENST00000523328 ZRANB3Q5FWF4 1079 aa22.07■■□□□ 1.12
PVT1-218ENST00000523328 RAB43Q86YS6 212 aa22.07■■□□□ 1.12
PVT1-218ENST00000523328 RNF25Q96BH1 459 aaPredicted RBP22.07■■□□□ 1.12
PVT1-218ENST00000523328 IQCDQ96DY2 449 aa22.07■■□□□ 1.12
PVT1-218ENST00000523328 LINC00615Q96LM1 132 aaPredicted RBP22.07■■□□□ 1.12
PVT1-218ENST00000523328 C5orf34Q96MH7 638 aa22.07■■□□□ 1.12
PVT1-218ENST00000523328 PITPNM3Q9BZ71 974 aa22.07■■□□□ 1.12
PVT1-218ENST00000523328 SAE1Q9UBE0 346 aaPredicted RBP22.07■■□□□ 1.12
PVT1-218ENST00000523328 DIDO1Q9BTC0 2240 aaKnown RBP22.07■■□□□ 1.12
PVT1-218ENST00000523328 MATN2O00339 956 aa22.06■■□□□ 1.12
PVT1-218ENST00000523328 PRAMEF1O95521 474 aa22.06■■□□□ 1.12
PVT1-218ENST00000523328 KRT1P04264 644 aa22.06■■□□□ 1.12
PVT1-218ENST00000523328 POLBP06746 335 aa22.06■■□□□ 1.12
PVT1-218ENST00000523328 PRDX3P30048 256 aaKnown RBP22.06■■□□□ 1.12
PVT1-218ENST00000523328 LMAN1P49257 510 aa22.06■■□□□ 1.12
PVT1-218ENST00000523328 GSE1Q14687 1217 aa22.06■■□□□ 1.12
PVT1-218ENST00000523328 SLC18A3Q16572 532 aa22.06■■□□□ 1.12
PVT1-218ENST00000523328 CRB2Q5IJ48 1285 aa22.06■■□□□ 1.12
PVT1-218ENST00000523328 MRGPREQ86SM8 312 aa22.06■■□□□ 1.12
PVT1-218ENST00000523328 DAAM2Q86T65 1068 aa22.06■■□□□ 1.12
PVT1-218ENST00000523328 ACVR1CQ8NER5 493 aa22.06■■□□□ 1.12
PVT1-218ENST00000523328 SLC35G2Q8TBE7 412 aa22.06■■□□□ 1.12
PVT1-218ENST00000523328 TFB1MQ8WVM0 346 aaKnown RBP22.06■■□□□ 1.12
PVT1-218ENST00000523328 FCRL5Q96RD9 977 aa22.06■■□□□ 1.12
PVT1-218ENST00000523328 NRTNQ99748 197 aa22.06■■□□□ 1.12
PVT1-218ENST00000523328 DPH2Q9BQC3 489 aaPredicted RBP22.06■■□□□ 1.12
PVT1-218ENST00000523328 PCM1Q15154 2024 aa22.06■■□□□ 1.12
PVT1-218ENST00000523328 ANKUB1A6NFN9 424 aa22.05■■□□□ 1.12
PVT1-218ENST00000523328 F5H423 210 aaPredicted RBP22.05■■□□□ 1.12
PVT1-218ENST00000523328 GOLGA6L22H0YM25 854 aa22.05■■□□□ 1.12
PVT1-218ENST00000523328 BTN3A3O00478 584 aa22.05■■□□□ 1.12
PVT1-218ENST00000523328 ZNF749O43361 778 aa22.05■■□□□ 1.12
PVT1-218ENST00000523328 TMEM253P0C7T8 217 aa22.05■■□□□ 1.12
PVT1-218ENST00000523328 HNRNPH3P31942 346 aaKnown RBP22.05■■□□□ 1.12
PVT1-218ENST00000523328 NR2C2P49116 596 aa22.05■■□□□ 1.12
PVT1-218ENST00000523328 KYNUQ16719 465 aa22.05■■□□□ 1.12
PVT1-218ENST00000523328 LRRC38Q5VT99 294 aa22.05■■□□□ 1.12
PVT1-218ENST00000523328 IGFL3Q6UXB1 125 aa22.05■■□□□ 1.12
PVT1-218ENST00000523328 MFSD7Q6UXD7 560 aa22.05■■□□□ 1.12
PVT1-218ENST00000523328 IPMKQ8NFU5 416 aa22.05■■□□□ 1.12
PVT1-218ENST00000523328 INPP5DQ92835 1189 aa22.05■■□□□ 1.12
PVT1-218ENST00000523328 BARD1Q99728 777 aaKnown RBP22.05■■□□□ 1.12
PVT1-218ENST00000523328 DHRS4Q9BTZ2 278 aa22.05■■□□□ 1.12
PVT1-218ENST00000523328 SRMSQ9H3Y6 488 aa22.05■■□□□ 1.12
PVT1-218ENST00000523328 SERTAD3Q9UJW9 196 aa22.05■■□□□ 1.12
PVT1-218ENST00000523328 HEBP2Q9Y5Z4 205 aa22.05■■□□□ 1.12
PVT1-218ENST00000523328 GSAPA4D1B5 854 aa22.04■■□□□ 1.12
PVT1-218ENST00000523328 C9J4A7 227 aa22.04■■□□□ 1.12
PVT1-218ENST00000523328 E7EQ34 232 aa22.04■■□□□ 1.12
PVT1-218ENST00000523328 BTN3A1O00481 513 aa22.04■■□□□ 1.12
PVT1-218ENST00000523328 STX7O15400 261 aaKnown RBP22.04■■□□□ 1.12
PVT1-218ENST00000523328 PYGMP11217 842 aa22.04■■□□□ 1.12
PVT1-218ENST00000523328 PECAM1P16284 738 aaPredicted RBP22.04■■□□□ 1.12
PVT1-218ENST00000523328 OTX2P32243 289 aa22.04■■□□□ 1.12
PVT1-218ENST00000523328 TNNT3P45378 269 aaPredicted RBP22.04■■□□□ 1.12
PVT1-218ENST00000523328 UBASH3AP57075 661 aa22.04■■□□□ 1.12
PVT1-218ENST00000523328 ASTE1Q2TB18 679 aaPredicted RBP22.04■■□□□ 1.12
PVT1-218ENST00000523328 SPOCD1Q6ZMY3 1216 aa22.04■■□□□ 1.12
PVT1-218ENST00000523328 CFAP206Q8IYR0 622 aa22.04■■□□□ 1.12
PVT1-218ENST00000523328 ZNF567Q8N184 647 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms