RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 IYDQ6PHW0 289 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 CRTC3Q6UUV7 619 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 CLEC18BQ6UXF7 455 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 ARHGAP36Q6ZRI8 547 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 MAMDC2Q7Z304 686 aaPredicted RBP6.13□□□□□ -1.43
PABPC1-220ENST00000522658 TIPARPQ7Z3E1 657 aaKnown RBP6.13□□□□□ -1.43
PABPC1-220ENST00000522658 ARHGAP22Q7Z5H3 698 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 HPS6Q86YV9 775 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 TMEM126BQ8IUX1 230 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 PSTKQ8IV42 348 aaKnown RBP6.13□□□□□ -1.43
PABPC1-220ENST00000522658 RBM12BQ8IXT5 1001 aaKnown RBP6.13□□□□□ -1.43
PABPC1-220ENST00000522658 PELI3Q8N2H9 469 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 CLEC18CQ8NCF0 446 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 LPCAT1Q8NF37 534 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 GDAP1Q8TB36 358 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 SCAMP4Q969E2 229 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 ZNF653Q96CK0 615 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 C9orf72Q96LT7 481 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 C5orf34Q96MH7 638 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 TTC25Q96NG3 672 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 AGPAT1Q99943 283 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 ANP32EQ9BTT0 268 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 RIOK2Q9BVS4 552 aaKnown RBP6.13□□□□□ -1.43
PABPC1-220ENST00000522658 SPATA16Q9BXB7 569 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 NAA15Q9BXJ9 866 aaKnown RBP6.13□□□□□ -1.43
PABPC1-220ENST00000522658 NUP62CLQ9H1M0 184 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 ABCG8Q9H221 673 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 CARD9Q9H257 536 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 GANQ9H2C0 597 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 NOD2Q9HC29 1040 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 MRPL47Q9HD33 250 aaKnown RBP6.13□□□□□ -1.43
PABPC1-220ENST00000522658 LHX9Q9NQ69 397 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 KLC4Q9NSK0 619 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.13□□□□□ -1.43
PABPC1-220ENST00000522658 POT1Q9NUX5 634 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 TBC1D29Q9UFV1 150 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 DNAJC16Q9Y2G8 782 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 PRKAB1Q9Y478 270 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 PLEKHM1Q9Y4G2 1056 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 UBA6A0AVT1 1052 aaPredicted RBP6.12□□□□□ -1.43
PABPC1-220ENST00000522658 GPR89AB7ZAQ6 455 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 KLHL41O60662 606 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 DNAJB5O75953 348 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 UBOX5O94941 541 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 SLC25A14O95258 325 aaPredicted RBP6.12□□□□□ -1.43
PABPC1-220ENST00000522658 ALPPP05187 535 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 KLK3P07288 261 aaPredicted RBP6.12□□□□□ -1.43
PABPC1-220ENST00000522658 GPR89BP0CG08 455 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 GM2AP17900 193 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 MIPP30301 263 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 GJC1P36383 396 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 KIR2DL2P43627 348 aaPredicted RBP6.12□□□□□ -1.43
PABPC1-220ENST00000522658 ZNF165P49910 485 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 PER3P56645 1201 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 JAM2P57087 298 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 UBXN1Q04323 297 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 SEMA5AQ13591 1074 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 UGT8Q16880 541 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 ANKRD20A8PQ5CZ79 823 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 CCDC122Q5T0U0 273 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 TMTC4Q5T4D3 741 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 LYPLAL1Q5VWZ2 237 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 ALS2CLQ60I27 953 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 ACAD10Q6JQN1 1059 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 FAM92BQ6ZTR7 304 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 TMEM26Q6ZUK4 368 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 REC114Q7Z4M0 266 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 PRSS42Q7Z5A4 293 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 SYVN1Q86TM6 617 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 LRRTM4Q86VH4 590 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 TRAPPC5Q8IUR0 188 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 LRRC49Q8IUZ0 686 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 APLFQ8IW19 511 aaPredicted RBP6.12□□□□□ -1.43
PABPC1-220ENST00000522658 ARHGAP12Q8IWW6 846 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 RHOT1Q8IXI2 618 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 MCOLN2Q8IZK6 566 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 NPWQ8N729 165 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 CT55Q8WUE5 264 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 TM9SF4Q92544 642 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 UBXN4Q92575 508 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 N4BP2L2Q92802 583 aaPredicted RBP6.12□□□□□ -1.43
PABPC1-220ENST00000522658 MR1Q95460 341 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 DACT3Q96B18 629 aaPredicted RBP6.12□□□□□ -1.43
PABPC1-220ENST00000522658 TCTN2Q96GX1 697 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 MAP6Q96JE9 813 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 MCCC1Q96RQ3 725 aaPredicted RBP6.12□□□□□ -1.43
PABPC1-220ENST00000522658 ADGRE3Q9BY15 652 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 GPR87Q9BY21 358 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 ILKAPQ9H0C8 392 aaPredicted RBP6.12□□□□□ -1.43
PABPC1-220ENST00000522658 ING2Q9H160 280 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 OR2AG1Q9H205 316 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 ZNF768Q9H5H4 540 aaKnown RBP6.12□□□□□ -1.43
PABPC1-220ENST00000522658 SOHLH2Q9NX45 425 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 PDP2Q9P2J9 529 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 MYO1AQ9UBC5 1043 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 SNX7Q9UNH6 387 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 PCDHGB7Q9Y5F8 929 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 PCDHGA9Q9Y5G4 932 aaKnown RBP6.12□□□□□ -1.43
PABPC1-220ENST00000522658 PCDHGA6Q9Y5G7 932 aa6.12□□□□□ -1.43
PABPC1-220ENST00000522658 TLN1Q9Y490 2541 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms