RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 CMTM8Q8IZV2 173 aa16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 COX18Q8N8Q8 333 aa16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 LRRC57Q8N9N7 239 aa16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 ATP6V1C2Q8NEY4 427 aa16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 PNPT1Q8TCS8 783 aaKnown RBP16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 WDR60Q8WVS4 1066 aa16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 PIH1D2Q8WWB5 315 aa16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 IKZF2Q9UKS7 526 aa16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 CNTN6Q9UQ52 1028 aa16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 SH3GLB1Q9Y371 365 aa16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 UPK3BL1B0FP48 263 aa16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 UPK3BL2E5RIL1 263 aa16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 OR4F21O95013 312 aa16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 SNAI1O95863 264 aaPredicted RBP16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 RYKP34925 604 aa16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 DPY19L1Q2PZI1 675 aa16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 TBC1D25Q3MII6 688 aa16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 PPM1JQ5JR12 505 aa16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 AP3S1Q92572 193 aa16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 IGSF21Q96ID5 467 aa16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 EIF2B4Q9UI10 523 aaKnown RBP16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 FMN2Q9NZ56 1722 aa16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 MTMR11A4FU01 709 aa16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 FAM155BO75949 473 aa16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 SEC24AO95486 1093 aa16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 LYNP07948 512 aa16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 GLB1L3Q8NCI6 653 aaPredicted RBP16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 NPAS2Q99743 824 aa16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 NOL6Q9H6R4 1146 aaKnown RBP16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 CKLFQ9UBR5 152 aa16.01■□□□□ 0.15
PCDHA3-201ENST00000522353 TCRBV7S2A1N4TA0A589 114 aa16■□□□□ 0.15
PCDHA3-201ENST00000522353 TYRP14679 529 aa16■□□□□ 0.15
PCDHA3-201ENST00000522353 CTSKP43235 329 aa16■□□□□ 0.15
PCDHA3-201ENST00000522353 NRG3P56975 720 aa16■□□□□ 0.15
PCDHA3-201ENST00000522353 HSPB3Q12988 150 aa16■□□□□ 0.15
PCDHA3-201ENST00000522353 COL9A3Q14050 684 aaPredicted RBP16■□□□□ 0.15
PCDHA3-201ENST00000522353 CA9Q16790 459 aa16■□□□□ 0.15
PCDHA3-201ENST00000522353 Q6ZVU0 165 aa16■□□□□ 0.15
PCDHA3-201ENST00000522353 DCBLD1Q8N8Z6 715 aa16■□□□□ 0.15
PCDHA3-201ENST00000522353 CYB5D2Q8WUJ1 264 aa16■□□□□ 0.15
PCDHA3-201ENST00000522353 DCAKDQ8WVC6 231 aa16■□□□□ 0.15
PCDHA3-201ENST00000522353 OVCA2Q8WZ82 227 aa16■□□□□ 0.15
PCDHA3-201ENST00000522353 FBXL18Q96ME1 805 aa16■□□□□ 0.15
PCDHA3-201ENST00000522353 KIFC1Q9BW19 673 aa16■□□□□ 0.15
PCDHA3-201ENST00000522353 MCM8Q9UJA3 840 aa16■□□□□ 0.15
PCDHA3-201ENST00000522353 K7EPI3 171 aa16■□□□□ 0.15
PCDHA3-201ENST00000522353 TAS2R39P59534 338 aa16■□□□□ 0.15
PCDHA3-201ENST00000522353 ANKRD22Q5VYY1 191 aa16■□□□□ 0.15
PCDHA3-201ENST00000522353 DENND1AQ8TEH3 1009 aa16■□□□□ 0.15
PCDHA3-201ENST00000522353 GABRQQ9UN88 632 aa16■□□□□ 0.15
PCDHA3-201ENST00000522353 PDX1P52945 283 aa16■□□□□ 0.15
PCDHA3-201ENST00000522353 AP1S2P56377 157 aa16■□□□□ 0.15
PCDHA3-201ENST00000522353 RAPSNQ13702 412 aa16■□□□□ 0.15
PCDHA3-201ENST00000522353 MYLK3Q32MK0 819 aa16■□□□□ 0.15
PCDHA3-201ENST00000522353 TMPRSS11AQ6ZMR5 421 aa16■□□□□ 0.15
PCDHA3-201ENST00000522353 GK5Q6ZS86 529 aa16■□□□□ 0.15
PCDHA3-201ENST00000522353 ABHD13Q7L211 337 aa16■□□□□ 0.15
PCDHA3-201ENST00000522353 TFB2MQ9H5Q4 396 aaKnown RBP16■□□□□ 0.15
PCDHA3-201ENST00000522353 SIPA1L2Q9P2F8 1722 aaPredicted RBP16■□□□□ 0.15
PCDHA3-201ENST00000522353 CCDC162PA2VCL2 907 aa16■□□□□ 0.15
PCDHA3-201ENST00000522353 G3V2T6 193 aa16■□□□□ 0.15
PCDHA3-201ENST00000522353 OR5F1O95221 314 aa16■□□□□ 0.15
PCDHA3-201ENST00000522353 KLK3P07288 261 aaPredicted RBP16■□□□□ 0.15
PCDHA3-201ENST00000522353 DPYSQ14117 519 aa16■□□□□ 0.15
PCDHA3-201ENST00000522353 MBOAT1Q6ZNC8 495 aa16■□□□□ 0.15
PCDHA3-201ENST00000522353 GKN2Q86XP6 184 aa16■□□□□ 0.15
PCDHA3-201ENST00000522353 DCAF4L2Q8NA75 395 aa16■□□□□ 0.15
PCDHA3-201ENST00000522353 CAMKVQ8NCB2 501 aa16■□□□□ 0.15
PCDHA3-201ENST00000522353 POLE3Q9NRF9 147 aa16■□□□□ 0.15
PCDHA3-201ENST00000522353 PIGVQ9NUD9 493 aa16■□□□□ 0.15
PCDHA3-201ENST00000522353 SSR3Q9UNL2 185 aa16■□□□□ 0.15
PCDHA3-201ENST00000522353 IRS2Q9Y4H2 1338 aa15.99■□□□□ 0.15
PCDHA3-201ENST00000522353 RIIAD1A6NNX1 92 aa15.99■□□□□ 0.15
PCDHA3-201ENST00000522353 PDPK1O15530 556 aa15.99■□□□□ 0.15
PCDHA3-201ENST00000522353 KCNQ1P51787 676 aa15.99■□□□□ 0.15
PCDHA3-201ENST00000522353 OC90Q02509 493 aaPredicted RBP15.99■□□□□ 0.15
PCDHA3-201ENST00000522353 LIN54Q6MZP7 749 aa15.99■□□□□ 0.15
PCDHA3-201ENST00000522353 PXYLP1Q8TE99 480 aa15.99■□□□□ 0.15
PCDHA3-201ENST00000522353 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.99■□□□□ 0.15
PCDHA3-201ENST00000522353 SSU72Q9NP77 194 aaKnown RBP15.99■□□□□ 0.15
PCDHA3-201ENST00000522353 PLIN3O60664 434 aa15.99■□□□□ 0.15
PCDHA3-201ENST00000522353 PUS10Q3MIT2 529 aaKnown RBP15.99■□□□□ 0.15
PCDHA3-201ENST00000522353 NUDT13Q86X67 352 aa15.99■□□□□ 0.15
PCDHA3-201ENST00000522353 RASGRP3Q8IV61 690 aa15.99■□□□□ 0.15
PCDHA3-201ENST00000522353 PMEPA1Q969W9 287 aa15.99■□□□□ 0.15
PCDHA3-201ENST00000522353 TMEM109Q9BVC6 243 aa15.99■□□□□ 0.15
PCDHA3-201ENST00000522353 CLK4Q9HAZ1 481 aaKnown RBP15.99■□□□□ 0.15
PCDHA3-201ENST00000522353 IRAK3Q9Y616 596 aa15.99■□□□□ 0.15
PCDHA3-201ENST00000522353 CLCA3PQ9Y6N3 262 aa15.99■□□□□ 0.15
PCDHA3-201ENST00000522353 UBE2QL1A1L167 161 aa15.99■□□□□ 0.15
PCDHA3-201ENST00000522353 DUXAA6NLW8 204 aa15.99■□□□□ 0.15
PCDHA3-201ENST00000522353 CAPGP40121 348 aa15.99■□□□□ 0.15
PCDHA3-201ENST00000522353 MLLT3P42568 568 aaPredicted RBP15.99■□□□□ 0.15
PCDHA3-201ENST00000522353 CCNHP51946 323 aaPredicted RBP15.99■□□□□ 0.15
PCDHA3-201ENST00000522353 TRAP1Q12931 704 aaKnown RBP15.99■□□□□ 0.15
PCDHA3-201ENST00000522353 DCST1Q5T197 706 aa15.99■□□□□ 0.15
PCDHA3-201ENST00000522353 DDI2Q5TDH0 399 aa15.99■□□□□ 0.15
PCDHA3-201ENST00000522353 NUP54Q7Z3B4 507 aa15.99■□□□□ 0.15
PCDHA3-201ENST00000522353 PQLC1Q8N2U9 271 aa15.99■□□□□ 0.15
PCDHA3-201ENST00000522353 ZNF516Q92618 1163 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms