RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 A0A1W2PR77 199 aa12.8□□□□□ -0.36
CPNE3-205ENST00000522240 NPEPPSL1A6NEC2 478 aa12.8□□□□□ -0.36
CPNE3-205ENST00000522240 PRR19A6NJB7 356 aa12.8□□□□□ -0.36
CPNE3-205ENST00000522240 SYCE1LA8MT33 242 aa12.8□□□□□ -0.36
CPNE3-205ENST00000522240 BTN3A1O00481 513 aa12.8□□□□□ -0.36
CPNE3-205ENST00000522240 BIRC5O15392 142 aa12.8□□□□□ -0.36
CPNE3-205ENST00000522240 THEGLP0DJG4 465 aa12.8□□□□□ -0.36
CPNE3-205ENST00000522240 CD38P28907 300 aa12.8□□□□□ -0.36
CPNE3-205ENST00000522240 CNR2P34972 360 aa12.8□□□□□ -0.36
CPNE3-205ENST00000522240 MDH1P40925 334 aaKnown RBP12.8□□□□□ -0.36
CPNE3-205ENST00000522240 HSPA14Q0VDF9 509 aa12.8□□□□□ -0.36
CPNE3-205ENST00000522240 LRP8Q14114 963 aa12.8□□□□□ -0.36
CPNE3-205ENST00000522240 PCLAFQ15004 111 aa12.8□□□□□ -0.36
CPNE3-205ENST00000522240 TUBB8Q3ZCM7 444 aa12.8□□□□□ -0.36
CPNE3-205ENST00000522240 TPRG1LQ5T0D9 272 aa12.8□□□□□ -0.36
CPNE3-205ENST00000522240 PMS2CLQ68D20 193 aa12.8□□□□□ -0.36
CPNE3-205ENST00000522240 ENPP7Q6UWV6 458 aa12.8□□□□□ -0.36
CPNE3-205ENST00000522240 XKR5Q6UX68 686 aa12.8□□□□□ -0.36
CPNE3-205ENST00000522240 ZYG11AQ6WRX3 759 aa12.8□□□□□ -0.36
CPNE3-205ENST00000522240 PIWIL4Q7Z3Z4 852 aaKnown RBP12.8□□□□□ -0.36
CPNE3-205ENST00000522240 ISCA2Q86U28 154 aa12.8□□□□□ -0.36
CPNE3-205ENST00000522240 RASGRP3Q8IV61 690 aa12.8□□□□□ -0.36
CPNE3-205ENST00000522240 SLC22A15Q8IZD6 547 aa12.8□□□□□ -0.36
CPNE3-205ENST00000522240 SLC22A18ASQ8N1D0 253 aa12.8□□□□□ -0.36
CPNE3-205ENST00000522240 SPATA6LQ8N4H0 392 aa12.8□□□□□ -0.36
CPNE3-205ENST00000522240 TMEM151AQ8N4L1 468 aa12.8□□□□□ -0.36
CPNE3-205ENST00000522240 CCDC63Q8NA47 563 aa12.8□□□□□ -0.36
CPNE3-205ENST00000522240 RAB3IL1Q8TBN0 382 aa12.8□□□□□ -0.36
CPNE3-205ENST00000522240 STAG3L4Q8TBR4 150 aa12.8□□□□□ -0.36
CPNE3-205ENST00000522240 DYDC1Q8WWB3 177 aa12.8□□□□□ -0.36
CPNE3-205ENST00000522240 OR1E3Q8WZA6 343 aa12.8□□□□□ -0.36
CPNE3-205ENST00000522240 PTERQ96BW5 349 aa12.8□□□□□ -0.36
CPNE3-205ENST00000522240 PDXPQ96GD0 296 aa12.8□□□□□ -0.36
CPNE3-205ENST00000522240 ATOH8Q96SQ7 321 aa12.8□□□□□ -0.36
CPNE3-205ENST00000522240 C12orf65Q9H3J6 166 aaKnown RBP12.8□□□□□ -0.36
CPNE3-205ENST00000522240 CCDC134Q9H6E4 229 aa12.8□□□□□ -0.36
CPNE3-205ENST00000522240 ALG9Q9H6U8 611 aa12.8□□□□□ -0.36
CPNE3-205ENST00000522240 TM9SF3Q9HD45 589 aa12.8□□□□□ -0.36
CPNE3-205ENST00000522240 EIF2B4Q9UI10 523 aaKnown RBP12.8□□□□□ -0.36
CPNE3-205ENST00000522240 TMCO1Q9UM00 188 aa12.8□□□□□ -0.36
CPNE3-205ENST00000522240 PCYT1BQ9Y5K3 369 aaPredicted RBP12.8□□□□□ -0.36
CPNE3-205ENST00000522240 DGKBQ9Y6T7 804 aa12.8□□□□□ -0.36
CPNE3-205ENST00000522240 DMDP11532 3685 aa12.8□□□□□ -0.36
CPNE3-205ENST00000522240 CACNA1AO00555 2505 aa12.8□□□□□ -0.36
CPNE3-205ENST00000522240 EP300Q09472 2414 aaPredicted RBP12.79□□□□□ -0.36
CPNE3-205ENST00000522240 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.79□□□□□ -0.36
CPNE3-205ENST00000522240 SPTY2D1-AS1A0A0U1RR47 76 aa12.79□□□□□ -0.36
CPNE3-205ENST00000522240 G3V2L1 256 aa12.79□□□□□ -0.36
CPNE3-205ENST00000522240 SLC16A5O15375 505 aa12.79□□□□□ -0.36
CPNE3-205ENST00000522240 C8GP07360 202 aa12.79□□□□□ -0.36
CPNE3-205ENST00000522240 BPGMP07738 259 aa12.79□□□□□ -0.36
CPNE3-205ENST00000522240 ENO2P09104 434 aaPredicted RBP12.79□□□□□ -0.36
CPNE3-205ENST00000522240 SBK3P0C264 359 aa12.79□□□□□ -0.36
CPNE3-205ENST00000522240 MYL2P10916 166 aa12.79□□□□□ -0.36
CPNE3-205ENST00000522240 TAC1P20366 129 aa12.79□□□□□ -0.36
CPNE3-205ENST00000522240 GNPDA1P46926 289 aa12.79□□□□□ -0.36
CPNE3-205ENST00000522240 CLCNKAP51800 687 aa12.79□□□□□ -0.36
CPNE3-205ENST00000522240 PRKAA2P54646 552 aa12.79□□□□□ -0.36
CPNE3-205ENST00000522240 NFKB2Q00653 900 aa12.79□□□□□ -0.36
CPNE3-205ENST00000522240 TSNQ15631 228 aaKnown RBP12.79□□□□□ -0.36
CPNE3-205ENST00000522240 PDK4Q16654 411 aa12.79□□□□□ -0.36
CPNE3-205ENST00000522240 PPP1R3AQ16821 1122 aa12.79□□□□□ -0.36
CPNE3-205ENST00000522240 ALG11Q2TAA5 492 aa12.79□□□□□ -0.36
CPNE3-205ENST00000522240 TUSC1Q2TAM9 212 aa12.79□□□□□ -0.36
CPNE3-205ENST00000522240 PLA2G4EQ3MJ16 856 aa12.79□□□□□ -0.36
CPNE3-205ENST00000522240 LYSMD4Q5XG99 296 aa12.79□□□□□ -0.36
CPNE3-205ENST00000522240 CYHR1Q6ZMK1 362 aa12.79□□□□□ -0.36
CPNE3-205ENST00000522240 VRK3Q8IV63 474 aa12.79□□□□□ -0.36
CPNE3-205ENST00000522240 SPNS2Q8IVW8 549 aa12.79□□□□□ -0.36
CPNE3-205ENST00000522240 TRIM42Q8IWZ5 723 aa12.79□□□□□ -0.36
CPNE3-205ENST00000522240 TMEFF1Q8IYR6 380 aa12.79□□□□□ -0.36
CPNE3-205ENST00000522240 C1orf216Q8TAB5 229 aa12.79□□□□□ -0.36
CPNE3-205ENST00000522240 CKAP2Q8WWK9 683 aa12.79□□□□□ -0.36
CPNE3-205ENST00000522240 SREK1Q8WXA9 508 aaKnown RBP12.79□□□□□ -0.36
CPNE3-205ENST00000522240 CCDC126Q96EE4 140 aa12.79□□□□□ -0.36
CPNE3-205ENST00000522240 KLHDC7BQ96G42 594 aa12.79□□□□□ -0.36
CPNE3-205ENST00000522240 UNKQ9C0B0 810 aaKnown RBP12.79□□□□□ -0.36
CPNE3-205ENST00000522240 CARS2Q9HA77 564 aaKnown RBP12.79□□□□□ -0.36
CPNE3-205ENST00000522240 RDH14Q9HBH5 336 aa12.79□□□□□ -0.36
CPNE3-205ENST00000522240 MLXIPLQ9NP71 852 aa12.79□□□□□ -0.36
CPNE3-205ENST00000522240 SIRPGQ9P1W8 387 aa12.79□□□□□ -0.36
CPNE3-205ENST00000522240 ZNHIT2Q9UHR6 403 aa12.79□□□□□ -0.36
CPNE3-205ENST00000522240 IKZF3Q9UKT9 509 aa12.79□□□□□ -0.36
CPNE3-205ENST00000522240 ACSL5Q9ULC5 683 aa12.79□□□□□ -0.36
CPNE3-205ENST00000522240 RNF112Q9ULX5 631 aa12.79□□□□□ -0.36
CPNE3-205ENST00000522240 OARD1Q9Y530 152 aa12.79□□□□□ -0.36
CPNE3-205ENST00000522240 H3BM21 787 aa12.78□□□□□ -0.36
CPNE3-205ENST00000522240 CDC7O00311 574 aa12.78□□□□□ -0.36
CPNE3-205ENST00000522240 H2AFYO75367 372 aaKnown RBP12.78□□□□□ -0.36
CPNE3-205ENST00000522240 RASGRP1O95267 797 aa12.78□□□□□ -0.36
CPNE3-205ENST00000522240 MATN4O95460 622 aa12.78□□□□□ -0.36
CPNE3-205ENST00000522240 FUCA1P04066 466 aa12.78□□□□□ -0.36
CPNE3-205ENST00000522240 ACP5P13686 325 aa12.78□□□□□ -0.36
CPNE3-205ENST00000522240 CPA3P15088 417 aa12.78□□□□□ -0.36
CPNE3-205ENST00000522240 ATP5F1P24539 256 aaPredicted RBP12.78□□□□□ -0.36
CPNE3-205ENST00000522240 SRP54P61011 504 aaKnown RBP12.78□□□□□ -0.36
CPNE3-205ENST00000522240 ASPHQ12797 758 aa12.78□□□□□ -0.36
CPNE3-205ENST00000522240 NFE2L1Q14494 772 aa12.78□□□□□ -0.36
CPNE3-205ENST00000522240 OR4D1Q15615 310 aa12.78□□□□□ -0.36
CPNE3-205ENST00000522240 CDKL4Q5MAI5 379 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms