RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 HSPH1Q92598 858 aa7.17□□□□□ -1.26
CTNNA1-227ENST00000521387 PGM2Q96G03 612 aa7.17□□□□□ -1.26
CTNNA1-227ENST00000521387 ALPK1Q96QP1 1244 aa7.17□□□□□ -1.26
CTNNA1-227ENST00000521387 DDX50Q9BQ39 737 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-227ENST00000521387 CNPY3Q9BT09 278 aa7.17□□□□□ -1.26
CTNNA1-227ENST00000521387 ROPN1BQ9BZX4 212 aaPredicted RBP7.17□□□□□ -1.26
CTNNA1-227ENST00000521387 ZDHHC6Q9H6R6 413 aa7.17□□□□□ -1.26
CTNNA1-227ENST00000521387 ROPN1Q9HAT0 212 aaPredicted RBP7.17□□□□□ -1.26
CTNNA1-227ENST00000521387 PDE7BQ9NP56 450 aa7.17□□□□□ -1.26
CTNNA1-227ENST00000521387 ABCC13Q9NSE7 274 aa7.17□□□□□ -1.26
CTNNA1-227ENST00000521387 ZNF358Q9NW07 568 aa7.17□□□□□ -1.26
CTNNA1-227ENST00000521387 GPATCH2LQ9NWQ4 482 aa7.17□□□□□ -1.26
CTNNA1-227ENST00000521387 ARHGEF38Q9NXL2 777 aa7.17□□□□□ -1.26
CTNNA1-227ENST00000521387 CWC15Q9P013 229 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-227ENST00000521387 KLHL3Q9UH77 587 aa7.17□□□□□ -1.26
CTNNA1-227ENST00000521387 RSPH14Q9UHP6 348 aa7.17□□□□□ -1.26
CTNNA1-227ENST00000521387 LNPEPQ9UIQ6 1025 aa7.17□□□□□ -1.26
CTNNA1-227ENST00000521387 COQ6Q9Y2Z9 468 aa7.17□□□□□ -1.26
CTNNA1-227ENST00000521387 INTS1Q8N201 2190 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-227ENST00000521387 TLCD2A6NGC4 264 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 FOXO6A8MYZ6 492 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 ZW10O43264 779 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 MAN1A2O60476 641 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 WISP2O76076 250 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 MOCS2O96007 188 aaPredicted RBP7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 AGTP01019 485 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 FGF5P12034 268 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 PECAM1P16284 738 aaPredicted RBP7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 TFE3P19532 575 aaPredicted RBP7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 HTR1BP28222 390 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 HOXC12P31275 282 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 RPL22P35268 128 aaKnown RBP7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 MAGEA4P43358 317 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 RPL34P49207 117 aaKnown RBP7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 CDH6P55285 790 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 GPS1Q13098 491 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 CDO1Q16878 200 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 RNASEH2BQ5TBB1 312 aaKnown RBP7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 HIST2H2BDQ6DRA6 164 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 LCN10Q6JVE6 187 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 C22orf39Q6P5X5 142 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 NPNTQ6UXI9 565 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 NCCRP1Q6ZVX7 275 aaPredicted RBP7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 MED25Q71SY5 747 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 B4GALNT4Q76KP1 1039 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 CROCCP2Q86T23 111 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 TMEM200AQ86VY9 491 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 NLRP14Q86W24 1093 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 RELL1Q8IUW5 271 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 CIARTQ8N365 385 aaPredicted RBP7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 TMEM102Q8N9M5 508 aaPredicted RBP7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 OR56A4Q8NGH8 313 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 ZNF473Q8WTR7 871 aaKnown RBP7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 CLEC4CQ8WTT0 213 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 STK32AQ8WU08 396 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 RNF34Q969K3 372 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 RAB7BQ96AH8 199 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 C9orf72Q96LT7 481 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 CFAP57Q96MR6 1250 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 SERPINB12Q96P63 405 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 OR6C1Q96RD1 312 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 CCT8L2Q96SF2 557 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 LGR4Q9BXB1 951 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 KRTAP4-8Q9BYQ9 185 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 FRMD8P1Q9BZ68 369 aaPredicted RBP7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 MIS12Q9H081 205 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 TSPYL1Q9H0U9 437 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 PCDH9Q9HC56 1237 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 SAYSD1Q9NPB0 183 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 VPS51Q9UID3 782 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 SH3BGRL2Q9UJC5 107 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 G3BP2Q9UN86 482 aaKnown RBP7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 PLEKHA6Q9Y2H5 1048 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 PCDHGC4Q9Y5F7 938 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 GTF3C1Q12789 2109 aa7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 HRNRQ86YZ3 2850 aaPredicted RBP7.16□□□□□ -1.26
CTNNA1-227ENST00000521387 MGAM2Q2M2H8 2515 aa7.15□□□□□ -1.26
CTNNA1-227ENST00000521387 CCDC78A2IDD5 438 aa7.15□□□□□ -1.26
CTNNA1-227ENST00000521387 GMNCA6NCL1 334 aa7.15□□□□□ -1.26
CTNNA1-227ENST00000521387 E7EVH7 732 aa7.15□□□□□ -1.26
CTNNA1-227ENST00000521387 NEMP1O14524 444 aa7.15□□□□□ -1.26
CTNNA1-227ENST00000521387 ANKRD34CP0C6C1 535 aa7.15□□□□□ -1.26
CTNNA1-227ENST00000521387 LCP1P13796 627 aa7.15□□□□□ -1.26
CTNNA1-227ENST00000521387 CHN1P15882 459 aa7.15□□□□□ -1.26
CTNNA1-227ENST00000521387 CREB1P16220 341 aa7.15□□□□□ -1.26
CTNNA1-227ENST00000521387 MMP13P45452 471 aa7.15□□□□□ -1.26
CTNNA1-227ENST00000521387 CCNHP51946 323 aaPredicted RBP7.15□□□□□ -1.26
CTNNA1-227ENST00000521387 GDF10P55107 478 aa7.15□□□□□ -1.26
CTNNA1-227ENST00000521387 WDR4P57081 412 aaKnown RBP7.15□□□□□ -1.26
CTNNA1-227ENST00000521387 DAOAP59103 153 aa7.15□□□□□ -1.26
CTNNA1-227ENST00000521387 EIF3EP60228 445 aaKnown RBP7.15□□□□□ -1.26
CTNNA1-227ENST00000521387 ATP11AP98196 1134 aa7.15□□□□□ -1.26
CTNNA1-227ENST00000521387 ADIGQ0VDE8 80 aa7.15□□□□□ -1.26
CTNNA1-227ENST00000521387 BST2Q10589 180 aaKnown RBP7.15□□□□□ -1.26
CTNNA1-227ENST00000521387 ATP1A4Q13733 1029 aa7.15□□□□□ -1.26
CTNNA1-227ENST00000521387 DPYSL3Q14195 570 aa7.15□□□□□ -1.26
CTNNA1-227ENST00000521387 MYBPC3Q14896 1274 aa7.15□□□□□ -1.26
CTNNA1-227ENST00000521387 MORF4L2Q15014 288 aa7.15□□□□□ -1.26
CTNNA1-227ENST00000521387 LRRC14Q15048 493 aa7.15□□□□□ -1.26
CTNNA1-227ENST00000521387 HIF1AQ16665 826 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms