RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 TM4SF5O14894 197 aa15.01□□□□□ -0.01
LSM1-203ENST00000520755 RFPL1O75677 317 aa15.01□□□□□ -0.01
LSM1-203ENST00000520755 TRIM16O95361 564 aa15.01□□□□□ -0.01
LSM1-203ENST00000520755 LDOC1O95751 146 aaPredicted RBP15.01□□□□□ -0.01
LSM1-203ENST00000520755 FTH1P02794 183 aa15.01□□□□□ -0.01
LSM1-203ENST00000520755 SLC35E2BP0CK96 405 aa15.01□□□□□ -0.01
LSM1-203ENST00000520755 SAT1P21673 171 aa15.01□□□□□ -0.01
LSM1-203ENST00000520755 SDHBP21912 280 aa15.01□□□□□ -0.01
LSM1-203ENST00000520755 AOAHP28039 575 aa15.01□□□□□ -0.01
LSM1-203ENST00000520755 SERPINB8P50452 374 aa15.01□□□□□ -0.01
LSM1-203ENST00000520755 POU4F1Q01851 419 aa15.01□□□□□ -0.01
LSM1-203ENST00000520755 USP10Q14694 798 aaKnown RBP15.01□□□□□ -0.01
LSM1-203ENST00000520755 SEPT7Q16181 437 aaKnown RBP15.01□□□□□ -0.01
LSM1-203ENST00000520755 TIFABQ6ZNK6 161 aa15.01□□□□□ -0.01
LSM1-203ENST00000520755 SFTPA2Q8IWL1 248 aa15.01□□□□□ -0.01
LSM1-203ENST00000520755 ZDHHC1Q8WTX9 485 aa15.01□□□□□ -0.01
LSM1-203ENST00000520755 APOLD1Q96LR9 279 aa15.01□□□□□ -0.01
LSM1-203ENST00000520755 PANX3Q96QZ0 392 aa15.01□□□□□ -0.01
LSM1-203ENST00000520755 SH3GL2Q99962 352 aa15.01□□□□□ -0.01
LSM1-203ENST00000520755 CCM2Q9BSQ5 444 aa15.01□□□□□ -0.01
LSM1-203ENST00000520755 RTKNQ9BST9 563 aa15.01□□□□□ -0.01
LSM1-203ENST00000520755 LATS2Q9NRM7 1088 aa15.01□□□□□ -0.01
LSM1-203ENST00000520755 CDYLQ9Y232 598 aa15.01□□□□□ -0.01
LSM1-203ENST00000520755 DNMT3AQ9Y6K1 912 aaPredicted RBP15.01□□□□□ -0.01
LSM1-203ENST00000520755 SLC5A10A0PJK1 596 aa15□□□□□ -0.01
LSM1-203ENST00000520755 PDZK1P1A8MUH7 402 aa15□□□□□ -0.01
LSM1-203ENST00000520755 CBFA2T3O75081 653 aa15□□□□□ -0.01
LSM1-203ENST00000520755 VPS26AO75436 327 aa15□□□□□ -0.01
LSM1-203ENST00000520755 KRT37O76014 449 aa15□□□□□ -0.01
LSM1-203ENST00000520755 TSPAN12O95859 305 aa15□□□□□ -0.01
LSM1-203ENST00000520755 ZNF37AP17032 561 aaPredicted RBP15□□□□□ -0.01
LSM1-203ENST00000520755 CHRM3P20309 590 aa15□□□□□ -0.01
LSM1-203ENST00000520755 KCNA4P22459 653 aa15□□□□□ -0.01
LSM1-203ENST00000520755 RAB10P61026 200 aa15□□□□□ -0.01
LSM1-203ENST00000520755 DAB2P98082 770 aa15□□□□□ -0.01
LSM1-203ENST00000520755 DMPKQ09013 629 aa15□□□□□ -0.01
LSM1-203ENST00000520755 ILF2Q12905 390 aaKnown RBP15□□□□□ -0.01
LSM1-203ENST00000520755 BOP1Q14137 746 aaKnown RBP15□□□□□ -0.01
LSM1-203ENST00000520755 NFE2L1Q14494 772 aa15□□□□□ -0.01
LSM1-203ENST00000520755 SH2D5Q6ZV89 423 aa15□□□□□ -0.01
LSM1-203ENST00000520755 TRABD2AQ86V40 505 aa15□□□□□ -0.01
LSM1-203ENST00000520755 VRK3Q8IV63 474 aa15□□□□□ -0.01
LSM1-203ENST00000520755 CPNE9Q8IYJ1 553 aa15□□□□□ -0.01
LSM1-203ENST00000520755 KYQ8NBH2 561 aa15□□□□□ -0.01
LSM1-203ENST00000520755 OR2L2Q8NH16 312 aa15□□□□□ -0.01
LSM1-203ENST00000520755 BAHD1Q8TBE0 780 aaPredicted RBP15□□□□□ -0.01
LSM1-203ENST00000520755 HM13Q8TCT9 377 aa15□□□□□ -0.01
LSM1-203ENST00000520755 ELMO1Q92556 727 aa15□□□□□ -0.01
LSM1-203ENST00000520755 MTBPQ96DY7 904 aa15□□□□□ -0.01
LSM1-203ENST00000520755 CDC6Q99741 560 aa15□□□□□ -0.01
LSM1-203ENST00000520755 COG4Q9H9E3 785 aa15□□□□□ -0.01
LSM1-203ENST00000520755 POPDC3Q9HBV1 291 aa15□□□□□ -0.01
LSM1-203ENST00000520755 TMBIM4Q9HC24 238 aa15□□□□□ -0.01
LSM1-203ENST00000520755 SARS2Q9NP81 518 aaKnown RBP15□□□□□ -0.01
LSM1-203ENST00000520755 PRDM8Q9NQV8 689 aa15□□□□□ -0.01
LSM1-203ENST00000520755 TAS2R13Q9NYV9 303 aa15□□□□□ -0.01
LSM1-203ENST00000520755 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15□□□□□ -0.01
LSM1-203ENST00000520755 TBC1D29Q9UFV1 150 aa15□□□□□ -0.01
LSM1-203ENST00000520755 DHRS7Q9Y394 339 aa15□□□□□ -0.01
LSM1-203ENST00000520755 PIEZO1Q92508 2521 aa14.99□□□□□ -0.01
LSM1-203ENST00000520755 TRBV23OR9-2A0A075B6M9 112 aa14.99□□□□□ -0.01
LSM1-203ENST00000520755 DCDC2BA2VCK2 349 aa14.99□□□□□ -0.01
LSM1-203ENST00000520755 MGAT4DA6NG13 374 aa14.99□□□□□ -0.01
LSM1-203ENST00000520755 E5RI56 91 aa14.99□□□□□ -0.01
LSM1-203ENST00000520755 F8W8V4 182 aa14.99□□□□□ -0.01
LSM1-203ENST00000520755 KCNJ13O60928 360 aa14.99□□□□□ -0.01
LSM1-203ENST00000520755 GPC4O75487 556 aa14.99□□□□□ -0.01
LSM1-203ENST00000520755 EML2O95834 649 aa14.99□□□□□ -0.01
LSM1-203ENST00000520755 TOP3BO95985 862 aaKnown RBP14.99□□□□□ -0.01
LSM1-203ENST00000520755 STMN1P16949 149 aa14.99□□□□□ -0.01
LSM1-203ENST00000520755 CSRP1P21291 193 aaKnown RBP14.99□□□□□ -0.01
LSM1-203ENST00000520755 IDSP22304 550 aa14.99□□□□□ -0.01
LSM1-203ENST00000520755 RPL10P27635 214 aaKnown RBP14.99□□□□□ -0.01
LSM1-203ENST00000520755 CCNFP41002 786 aa14.99□□□□□ -0.01
LSM1-203ENST00000520755 PREPP48147 710 aa14.99□□□□□ -0.01
LSM1-203ENST00000520755 NOVA1P51513 510 aaKnown RBP14.99□□□□□ -0.01
LSM1-203ENST00000520755 CLCNKAP51800 687 aa14.99□□□□□ -0.01
LSM1-203ENST00000520755 IRF9Q00978 393 aa14.99□□□□□ -0.01
LSM1-203ENST00000520755 DLG1Q12959 904 aa14.99□□□□□ -0.01
LSM1-203ENST00000520755 DNAJC3Q13217 504 aa14.99□□□□□ -0.01
LSM1-203ENST00000520755 NR0B2Q15466 257 aa14.99□□□□□ -0.01
LSM1-203ENST00000520755 PROX2Q3B8N5 592 aa14.99□□□□□ -0.01
LSM1-203ENST00000520755 ACSBG2Q5FVE4 666 aa14.99□□□□□ -0.01
LSM1-203ENST00000520755 PPM1JQ5JR12 505 aa14.99□□□□□ -0.01
LSM1-203ENST00000520755 PAQR3Q6TCH7 311 aa14.99□□□□□ -0.01
LSM1-203ENST00000520755 SLC35F3Q8IY50 421 aa14.99□□□□□ -0.01
LSM1-203ENST00000520755 CFAP206Q8IYR0 622 aa14.99□□□□□ -0.01
LSM1-203ENST00000520755 CENPLQ8N0S6 344 aaPredicted RBP14.99□□□□□ -0.01
LSM1-203ENST00000520755 ZBTB2Q8N680 514 aa14.99□□□□□ -0.01
LSM1-203ENST00000520755 ARL10Q8N8L6 244 aa14.99□□□□□ -0.01
LSM1-203ENST00000520755 FAM181AQ8N9Y4 354 aa14.99□□□□□ -0.01
LSM1-203ENST00000520755 ANKRD49Q8WVL7 239 aa14.99□□□□□ -0.01
LSM1-203ENST00000520755 PATE1Q8WXA2 126 aa14.99□□□□□ -0.01
LSM1-203ENST00000520755 GLMNQ92990 594 aa14.99□□□□□ -0.01
LSM1-203ENST00000520755 ARL8AQ96BM9 186 aa14.99□□□□□ -0.01
LSM1-203ENST00000520755 PGM2Q96G03 612 aa14.99□□□□□ -0.01
LSM1-203ENST00000520755 RUFY1Q96T51 708 aa14.99□□□□□ -0.01
LSM1-203ENST00000520755 TRMT6Q9UJA5 497 aaKnown RBP14.99□□□□□ -0.01
LSM1-203ENST00000520755 IKZF3Q9UKT9 509 aa14.99□□□□□ -0.01
LSM1-203ENST00000520755 C17orf113A0A1B0GUU1 675 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms