RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-222ENST00000520400 POLR3CQ9BUI4 534 aaPredicted RBP4.32□□□□□ -1.72
CTNNA1-222ENST00000520400 MIOSQ9NXC5 875 aa4.32□□□□□ -1.72
CTNNA1-222ENST00000520400 GAGE2DQ9UEU5 116 aa4.32□□□□□ -1.72
CTNNA1-222ENST00000520400 YIPF1Q9Y548 306 aa4.32□□□□□ -1.72
CTNNA1-222ENST00000520400 A0A0G2JNG1 304 aa4.31□□□□□ -1.72
CTNNA1-222ENST00000520400 ANKUB1A6NFN9 424 aa4.31□□□□□ -1.72
CTNNA1-222ENST00000520400 A8MXE2 369 aa4.31□□□□□ -1.72
CTNNA1-222ENST00000520400 H0YIN7 160 aa4.31□□□□□ -1.72
CTNNA1-222ENST00000520400 XPNPEP2O43895 674 aa4.31□□□□□ -1.72
CTNNA1-222ENST00000520400 DKC1O60832 514 aaKnown RBP eCLIP4.31□□□□□ -1.724e-9■■■□□ 16.1
CTNNA1-222ENST00000520400 TFAP2AP05549 437 aa4.31□□□□□ -1.72
CTNNA1-222ENST00000520400 SNRNP70P08621 437 aaKnown RBP4.31□□□□□ -1.72
CTNNA1-222ENST00000520400 MPZP25189 248 aa4.31□□□□□ -1.72
CTNNA1-222ENST00000520400 THOP1P52888 689 aa4.31□□□□□ -1.72
CTNNA1-222ENST00000520400 MBTD1Q05BQ5 628 aa4.31□□□□□ -1.72
CTNNA1-222ENST00000520400 KIR2DS5Q14953 304 aa4.31□□□□□ -1.72
CTNNA1-222ENST00000520400 FAM76BQ5HYJ3 339 aa4.31□□□□□ -1.72
CTNNA1-222ENST00000520400 GCNT6Q5T4J0 391 aa4.31□□□□□ -1.72
CTNNA1-222ENST00000520400 SMIM29Q86T20 159 aa4.31□□□□□ -1.72
CTNNA1-222ENST00000520400 POMGNT2Q8NAT1 580 aa4.31□□□□□ -1.72
CTNNA1-222ENST00000520400 XXYLT1Q8NBI6 393 aa4.31□□□□□ -1.72
CTNNA1-222ENST00000520400 OR5M8Q8NGP6 311 aa4.31□□□□□ -1.72
CTNNA1-222ENST00000520400 VPS33AQ96AX1 596 aa4.31□□□□□ -1.72
CTNNA1-222ENST00000520400 C17orf77Q96MU5 243 aa4.31□□□□□ -1.72
CTNNA1-222ENST00000520400 NEK1Q96PY6 1258 aa4.31□□□□□ -1.72
CTNNA1-222ENST00000520400 MEIS3Q99687 375 aa4.31□□□□□ -1.72
CTNNA1-222ENST00000520400 NEURL2Q9BR09 285 aa4.31□□□□□ -1.72
CTNNA1-222ENST00000520400 EVA1AQ9H8M9 152 aa4.31□□□□□ -1.72
CTNNA1-222ENST00000520400 CNOT10Q9H9A5 744 aaKnown RBP4.31□□□□□ -1.72
CTNNA1-222ENST00000520400 ZNF556Q9HAH1 456 aa4.31□□□□□ -1.72
CTNNA1-222ENST00000520400 HHATLQ9HCP6 504 aa4.31□□□□□ -1.72
CTNNA1-222ENST00000520400 Q9N2K0 584 aa4.31□□□□□ -1.72
CTNNA1-222ENST00000520400 EQTNQ9NQ60 294 aa4.31□□□□□ -1.72
CTNNA1-222ENST00000520400 LTBP4Q8N2S1 1624 aa4.31□□□□□ -1.72
CTNNA1-222ENST00000520400 EIF4G3O43432 1585 aaKnown RBP4.31□□□□□ -1.72
CTNNA1-222ENST00000520400 IQSEC2Q5JU85 1478 aa4.3□□□□□ -1.72
CTNNA1-222ENST00000520400 PTPRTO14522 1441 aa4.3□□□□□ -1.72
CTNNA1-222ENST00000520400 H7C0S8 307 aa4.3□□□□□ -1.72
CTNNA1-222ENST00000520400 TRIM77I1YAP6 450 aa4.3□□□□□ -1.72
CTNNA1-222ENST00000520400 CELF2O95319 508 aaKnown RBP4.3□□□□□ -1.72
CTNNA1-222ENST00000520400 BAG4O95429 457 aaKnown RBP4.3□□□□□ -1.72
CTNNA1-222ENST00000520400 TRUB2O95900 331 aaKnown RBP4.3□□□□□ -1.72
CTNNA1-222ENST00000520400 DANCRP0C864 163 aa4.3□□□□□ -1.72
CTNNA1-222ENST00000520400 VPREB1P12018 145 aa4.3□□□□□ -1.72
CTNNA1-222ENST00000520400 MARK3P27448 753 aa4.3□□□□□ -1.72
CTNNA1-222ENST00000520400 AHRP35869 848 aa4.3□□□□□ -1.72
CTNNA1-222ENST00000520400 CAPZA2P47755 286 aa4.3□□□□□ -1.72
CTNNA1-222ENST00000520400 KCNJ4P48050 445 aa4.3□□□□□ -1.72
CTNNA1-222ENST00000520400 ERVFC1-1P60608 527 aa4.3□□□□□ -1.72
CTNNA1-222ENST00000520400 CDK3Q00526 305 aa4.3□□□□□ -1.72
CTNNA1-222ENST00000520400 ARL16Q0P5N6 197 aa4.3□□□□□ -1.72
CTNNA1-222ENST00000520400 CRY2Q49AN0 593 aa4.3□□□□□ -1.72
CTNNA1-222ENST00000520400 KRBOX4Q5JUW0 171 aa4.3□□□□□ -1.72
CTNNA1-222ENST00000520400 C1orf141Q5JVX7 400 aa4.3□□□□□ -1.72
CTNNA1-222ENST00000520400 ZNF852Q6ZMS4 543 aa4.3□□□□□ -1.72
CTNNA1-222ENST00000520400 NAGSQ8N159 534 aa4.3□□□□□ -1.72
CTNNA1-222ENST00000520400 MCUQ8NE86 351 aa4.3□□□□□ -1.72
CTNNA1-222ENST00000520400 SECTM1Q8WVN6 248 aa4.3□□□□□ -1.72
CTNNA1-222ENST00000520400 SPACA9Q96E40 222 aaPredicted RBP4.3□□□□□ -1.72
CTNNA1-222ENST00000520400 ALG14Q96F25 216 aa4.3□□□□□ -1.72
CTNNA1-222ENST00000520400 OPA3Q9H6K4 179 aa4.3□□□□□ -1.72
CTNNA1-222ENST00000520400 ZCCHC17Q9NP64 241 aaKnown RBP4.3□□□□□ -1.72
CTNNA1-222ENST00000520400 DONSONQ9NYP3 566 aa4.3□□□□□ -1.72
CTNNA1-222ENST00000520400 PTTG2Q9NZH5 202 aa4.3□□□□□ -1.72
CTNNA1-222ENST00000520400 SELENONQ9NZV5 590 aa4.3□□□□□ -1.72
CTNNA1-222ENST00000520400 SPIN1Q9Y657 262 aaPredicted RBP4.3□□□□□ -1.72
CTNNA1-222ENST00000520400 MYH14Q7Z406 1995 aaKnown RBP4.3□□□□□ -1.72
CTNNA1-222ENST00000520400 SYNJ1O43426 1573 aa4.29□□□□□ -1.72
CTNNA1-222ENST00000520400 TCRBV21S2A2A0A5A6 115 aa4.29□□□□□ -1.72
CTNNA1-222ENST00000520400 ZNF500O60304 480 aaPredicted RBP4.29□□□□□ -1.72
CTNNA1-222ENST00000520400 GPR137BO60478 399 aa4.29□□□□□ -1.72
CTNNA1-222ENST00000520400 PRAMEF11O60813 436 aa4.29□□□□□ -1.72
CTNNA1-222ENST00000520400 CTSVO60911 334 aa4.29□□□□□ -1.72
CTNNA1-222ENST00000520400 MED24O75448 989 aa4.29□□□□□ -1.72
CTNNA1-222ENST00000520400 GLULP15104 373 aa4.29□□□□□ -1.72
CTNNA1-222ENST00000520400 MCCP23508 829 aa4.29□□□□□ -1.72
CTNNA1-222ENST00000520400 DGKAP23743 735 aa4.29□□□□□ -1.72
CTNNA1-222ENST00000520400 AZGP1P25311 298 aaKnown RBP4.29□□□□□ -1.72
CTNNA1-222ENST00000520400 TKTP29401 623 aaKnown RBP4.29□□□□□ -1.72
CTNNA1-222ENST00000520400 LMAN1P49257 510 aa4.29□□□□□ -1.72
CTNNA1-222ENST00000520400 RAD23AP54725 363 aa4.29□□□□□ -1.72
CTNNA1-222ENST00000520400 TPD52P55327 224 aaPredicted RBP4.29□□□□□ -1.72
CTNNA1-222ENST00000520400 CALD1Q05682 793 aaKnown RBP4.29□□□□□ -1.72
CTNNA1-222ENST00000520400 PRPF4BQ13523 1007 aaKnown RBP4.29□□□□□ -1.72
CTNNA1-222ENST00000520400 ASIC2Q16515 512 aa4.29□□□□□ -1.72
CTNNA1-222ENST00000520400 VWC2Q2TAL6 325 aa4.29□□□□□ -1.72
CTNNA1-222ENST00000520400 SIRPB2Q5JXA9 342 aa4.29□□□□□ -1.72
CTNNA1-222ENST00000520400 SPSB3Q6PJ21 355 aa4.29□□□□□ -1.72
CTNNA1-222ENST00000520400 SUSD1Q6UWL2 747 aa4.29□□□□□ -1.72
CTNNA1-222ENST00000520400 FOXL2NBQ6ZUU3 175 aa4.29□□□□□ -1.72
CTNNA1-222ENST00000520400 KCTD8Q6ZWB6 473 aa4.29□□□□□ -1.72
CTNNA1-222ENST00000520400 TMPRSS11BQ86T26 416 aa4.29□□□□□ -1.72
CTNNA1-222ENST00000520400 TMEM173Q86WV6 379 aaPredicted RBP4.29□□□□□ -1.72
CTNNA1-222ENST00000520400 MUC20Q8N307 709 aaPredicted RBP4.29□□□□□ -1.72
CTNNA1-222ENST00000520400 PI4KAP1Q8N8J0 262 aa4.29□□□□□ -1.72
CTNNA1-222ENST00000520400 POC1AQ8NBT0 407 aa4.29□□□□□ -1.72
CTNNA1-222ENST00000520400 SPDL1Q96EA4 605 aa4.29□□□□□ -1.72
CTNNA1-222ENST00000520400 MS4A10Q96PG2 267 aa4.29□□□□□ -1.72
CTNNA1-222ENST00000520400 ANKZF1Q9H8Y5 726 aa4.29□□□□□ -1.72
CTNNA1-222ENST00000520400 ACKR4Q9NPB9 350 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms