RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 CDC14CA4D256 554 aa12.11□□□□□ -0.47
CSMD1-205ENST00000519623 C21orf140B9A014 251 aa12.11□□□□□ -0.47
CSMD1-205ENST00000519623 METTL18O95568 372 aa12.11□□□□□ -0.47
CSMD1-205ENST00000519623 ZBTB11O95625 1053 aaPredicted RBP12.11□□□□□ -0.47
CSMD1-205ENST00000519623 SLC35G4P0C7Q5 338 aa12.11□□□□□ -0.47
CSMD1-205ENST00000519623 RALBP11234 206 aa12.11□□□□□ -0.47
CSMD1-205ENST00000519623 TPH1P17752 444 aa12.11□□□□□ -0.47
CSMD1-205ENST00000519623 POLR2CP19387 275 aaPredicted RBP12.11□□□□□ -0.47
CSMD1-205ENST00000519623 ITGALP20701 1170 aa12.11□□□□□ -0.47
CSMD1-205ENST00000519623 CETN2P41208 172 aa12.11□□□□□ -0.47
CSMD1-205ENST00000519623 ARCN1P48444 511 aaKnown RBP12.11□□□□□ -0.47
CSMD1-205ENST00000519623 ARL4DP49703 201 aa12.11□□□□□ -0.47
CSMD1-205ENST00000519623 VAV2P52735 878 aa12.11□□□□□ -0.47
CSMD1-205ENST00000519623 TUBB4BP68371 445 aa12.11□□□□□ -0.47
CSMD1-205ENST00000519623 LAMB3Q13751 1172 aa12.11□□□□□ -0.47
CSMD1-205ENST00000519623 TUBB2AQ13885 445 aa12.11□□□□□ -0.47
CSMD1-205ENST00000519623 SEPT6Q14141 434 aa12.11□□□□□ -0.47
CSMD1-205ENST00000519623 GSE1Q14687 1217 aa12.11□□□□□ -0.47
CSMD1-205ENST00000519623 GPR19Q15760 415 aa12.11□□□□□ -0.47
CSMD1-205ENST00000519623 PARP6Q2NL67 630 aa12.11□□□□□ -0.47
CSMD1-205ENST00000519623 GPR33Q49SQ1 333 aa12.11□□□□□ -0.47
CSMD1-205ENST00000519623 ZNF517Q6ZMY9 492 aaPredicted RBP12.11□□□□□ -0.47
CSMD1-205ENST00000519623 OOSP2Q86WS3 158 aa12.11□□□□□ -0.47
CSMD1-205ENST00000519623 CARFQ8N187 725 aa12.11□□□□□ -0.47
CSMD1-205ENST00000519623 FAM71DQ8N9W8 422 aa12.11□□□□□ -0.47
CSMD1-205ENST00000519623 SLC38A9Q8NBW4 561 aa12.11□□□□□ -0.47
CSMD1-205ENST00000519623 ACRBPQ8NEB7 543 aa12.11□□□□□ -0.47
CSMD1-205ENST00000519623 HM13Q8TCT9 377 aa12.11□□□□□ -0.47
CSMD1-205ENST00000519623 ZNF501Q96CX3 271 aaPredicted RBP12.11□□□□□ -0.47
CSMD1-205ENST00000519623 DNAJC1Q96KC8 554 aaKnown RBP12.11□□□□□ -0.47
CSMD1-205ENST00000519623 NRTNQ99748 197 aa12.11□□□□□ -0.47
CSMD1-205ENST00000519623 TUBB2BQ9BVA1 445 aa12.11□□□□□ -0.47
CSMD1-205ENST00000519623 GPR87Q9BY21 358 aa12.11□□□□□ -0.47
CSMD1-205ENST00000519623 TWSG1Q9GZX9 223 aa12.11□□□□□ -0.47
CSMD1-205ENST00000519623 RBSNQ9H1K0 784 aa12.11□□□□□ -0.47
CSMD1-205ENST00000519623 OR52A5Q9H2C5 316 aa12.11□□□□□ -0.47
CSMD1-205ENST00000519623 KCND1Q9NSA2 647 aa12.11□□□□□ -0.47
CSMD1-205ENST00000519623 ZDHHC3Q9NYG2 299 aa12.11□□□□□ -0.47
CSMD1-205ENST00000519623 POLHQ9Y253 713 aa12.11□□□□□ -0.47
CSMD1-205ENST00000519623 BTRCQ9Y297 605 aa12.11□□□□□ -0.47
CSMD1-205ENST00000519623 NAV2Q8IVL1 2488 aa12.1□□□□□ -0.47
CSMD1-205ENST00000519623 H7C0S8 307 aa12.1□□□□□ -0.47
CSMD1-205ENST00000519623 IPO7O95373 1038 aaKnown RBP12.1□□□□□ -0.47
CSMD1-205ENST00000519623 PRSS56P0CW18 603 aa12.1□□□□□ -0.47
CSMD1-205ENST00000519623 PSMA3P25788 255 aa12.1□□□□□ -0.47
CSMD1-205ENST00000519623 NDUFS1P28331 727 aa12.1□□□□□ -0.47
CSMD1-205ENST00000519623 PTPN4P29074 926 aa12.1□□□□□ -0.47
CSMD1-205ENST00000519623 PDHA2P29803 388 aa12.1□□□□□ -0.47
CSMD1-205ENST00000519623 MC4RP32245 332 aa12.1□□□□□ -0.47
CSMD1-205ENST00000519623 FOXK1P85037 733 aa12.1□□□□□ -0.47
CSMD1-205ENST00000519623 KLF1Q13351 362 aaPredicted RBP12.1□□□□□ -0.47
CSMD1-205ENST00000519623 IGFBP7Q16270 282 aa12.1□□□□□ -0.47
CSMD1-205ENST00000519623 LACTB2Q53H82 288 aaPredicted RBP12.1□□□□□ -0.47
CSMD1-205ENST00000519623 TCTN3Q6NUS6 607 aa12.1□□□□□ -0.47
CSMD1-205ENST00000519623 ARMC6Q6NXE6 501 aa12.1□□□□□ -0.47
CSMD1-205ENST00000519623 SERPINA9Q86WD7 417 aa12.1□□□□□ -0.47
CSMD1-205ENST00000519623 PHC3Q8NDX5 983 aa12.1□□□□□ -0.47
CSMD1-205ENST00000519623 ACVR1CQ8NER5 493 aa12.1□□□□□ -0.47
CSMD1-205ENST00000519623 OR8K5Q8NH50 307 aa12.1□□□□□ -0.47
CSMD1-205ENST00000519623 CDKN2AIPNLQ96HQ2 116 aa12.1□□□□□ -0.47
CSMD1-205ENST00000519623 FERD3LQ96RJ6 166 aa12.1□□□□□ -0.47
CSMD1-205ENST00000519623 ACTL8Q9H568 366 aa12.1□□□□□ -0.47
CSMD1-205ENST00000519623 COG4Q9H9E3 785 aa12.1□□□□□ -0.47
CSMD1-205ENST00000519623 NLE1Q9NVX2 485 aaPredicted RBP12.1□□□□□ -0.47
CSMD1-205ENST00000519623 TLK1Q9UKI8 766 aa12.1□□□□□ -0.47
CSMD1-205ENST00000519623 AMFRQ9UKV5 643 aa12.1□□□□□ -0.47
CSMD1-205ENST00000519623 POMT2Q9UKY4 750 aa12.1□□□□□ -0.47
CSMD1-205ENST00000519623 TP53TG5Q9Y2B4 290 aa12.1□□□□□ -0.47
CSMD1-205ENST00000519623 R3HDM2Q9Y2K5 976 aaKnown RBP12.1□□□□□ -0.47
CSMD1-205ENST00000519623 HEBP2Q9Y5Z4 205 aa12.1□□□□□ -0.47
CSMD1-205ENST00000519623 DOPEY2Q9Y3R5 2298 aa12.1□□□□□ -0.47
CSMD1-205ENST00000519623 MAST4O15021 2626 aa12.1□□□□□ -0.47
CSMD1-205ENST00000519623 COL12A1Q99715 3063 aa12.09□□□□□ -0.47
CSMD1-205ENST00000519623 A0A0U1RQJ8 604 aa12.09□□□□□ -0.47
CSMD1-205ENST00000519623 TCRBV7S2A1N4TA0A589 114 aa12.09□□□□□ -0.47
CSMD1-205ENST00000519623 SLC9B1P1A6NJY1 282 aa12.09□□□□□ -0.47
CSMD1-205ENST00000519623 CFAP99D6REC4 459 aa12.09□□□□□ -0.47
CSMD1-205ENST00000519623 BTN3A3O00478 584 aa12.09□□□□□ -0.47
CSMD1-205ENST00000519623 DDX3YO15523 660 aaKnown RBP12.09□□□□□ -0.47
CSMD1-205ENST00000519623 SCRG1O75711 98 aa12.09□□□□□ -0.47
CSMD1-205ENST00000519623 ZNF189O75820 626 aaPredicted RBP12.09□□□□□ -0.47
CSMD1-205ENST00000519623 NR1D1P20393 614 aa12.09□□□□□ -0.47
CSMD1-205ENST00000519623 ACRV1P26436 265 aa12.09□□□□□ -0.47
CSMD1-205ENST00000519623 PRDX3P30048 256 aaKnown RBP12.09□□□□□ -0.47
CSMD1-205ENST00000519623 CD151P48509 253 aa12.09□□□□□ -0.47
CSMD1-205ENST00000519623 PMS2P54278 862 aa12.09□□□□□ -0.47
CSMD1-205ENST00000519623 GDF10P55107 478 aa12.09□□□□□ -0.47
CSMD1-205ENST00000519623 RPS18P62269 152 aaKnown RBP12.09□□□□□ -0.47
CSMD1-205ENST00000519623 GPS2Q13227 327 aa12.09□□□□□ -0.47
CSMD1-205ENST00000519623 KRT33BQ14525 404 aa12.09□□□□□ -0.47
CSMD1-205ENST00000519623 ZRANB3Q5FWF4 1079 aa12.09□□□□□ -0.47
CSMD1-205ENST00000519623 COLEC12Q5KU26 742 aa12.09□□□□□ -0.47
CSMD1-205ENST00000519623 PLEKHS1Q5SXH7 462 aa12.09□□□□□ -0.47
CSMD1-205ENST00000519623 TMTC4Q5T4D3 741 aa12.09□□□□□ -0.47
CSMD1-205ENST00000519623 PRAMEF17Q5VTA0 474 aa12.09□□□□□ -0.47
CSMD1-205ENST00000519623 LCN10Q6JVE6 187 aa12.09□□□□□ -0.47
CSMD1-205ENST00000519623 ARHGEF18Q6ZSZ5 1173 aa12.09□□□□□ -0.47
CSMD1-205ENST00000519623 PEX26Q7Z412 305 aa12.09□□□□□ -0.47
CSMD1-205ENST00000519623 TMEM139Q8IV31 216 aa12.09□□□□□ -0.47
CSMD1-205ENST00000519623 APLFQ8IW19 511 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms