RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 KBTBD6Q86V97 674 aa26.04■■□□□ 1.76
COL13A1-210ENST00000517713 PCYOX1LQ8NBM8 494 aa26.04■■□□□ 1.76
COL13A1-210ENST00000517713 PPFIBP2Q8ND30 876 aa26.04■■□□□ 1.76
COL13A1-210ENST00000517713 SKA2Q8WVK7 121 aaPredicted RBP26.04■■□□□ 1.76
COL13A1-210ENST00000517713 BTN2A2Q8WVV5 523 aa26.04■■□□□ 1.76
COL13A1-210ENST00000517713 HPS4Q9NQG7 708 aa26.04■■□□□ 1.76
COL13A1-210ENST00000517713 CROTQ9UKG9 612 aa26.04■■□□□ 1.76
COL13A1-210ENST00000517713 ITM2BQ9Y287 266 aa26.04■■□□□ 1.76
COL13A1-210ENST00000517713 E7ENX8 843 aa26.03■■□□□ 1.76
COL13A1-210ENST00000517713 TRIM38O00635 465 aa26.03■■□□□ 1.76
COL13A1-210ENST00000517713 ENO2P09104 434 aaPredicted RBP26.03■■□□□ 1.76
COL13A1-210ENST00000517713 PSMD8P48556 350 aa26.03■■□□□ 1.76
COL13A1-210ENST00000517713 GRIK2Q13002 908 aa26.03■■□□□ 1.76
COL13A1-210ENST00000517713 Q6ZSR9 355 aa26.03■■□□□ 1.76
COL13A1-210ENST00000517713 VRK3Q8IV63 474 aa26.03■■□□□ 1.76
COL13A1-210ENST00000517713 TMIEQ8NEW7 156 aa26.03■■□□□ 1.76
COL13A1-210ENST00000517713 CDCA3Q99618 268 aaPredicted RBP26.03■■□□□ 1.76
COL13A1-210ENST00000517713 SLC12A9Q9BXP2 914 aa26.03■■□□□ 1.76
COL13A1-210ENST00000517713 NKX2-4Q9H2Z4 354 aa26.03■■□□□ 1.76
COL13A1-210ENST00000517713 PARVBQ9HBI1 364 aa26.03■■□□□ 1.76
COL13A1-210ENST00000517713 MRPL40Q9NQ50 206 aaKnown RBP26.03■■□□□ 1.76
COL13A1-210ENST00000517713 ARL15Q9NXU5 204 aa26.03■■□□□ 1.76
COL13A1-210ENST00000517713 BCAP29Q9UHQ4 241 aa26.03■■□□□ 1.76
COL13A1-210ENST00000517713 NDUFAF1Q9Y375 327 aa26.03■■□□□ 1.76
COL13A1-210ENST00000517713 SGTAO43765 313 aa26.02■■□□□ 1.76
COL13A1-210ENST00000517713 FCARP24071 287 aa26.02■■□□□ 1.76
COL13A1-210ENST00000517713 HMOX2P30519 316 aa26.02■■□□□ 1.76
COL13A1-210ENST00000517713 MSX2P35548 267 aaPredicted RBP26.02■■□□□ 1.76
COL13A1-210ENST00000517713 MAGEA10P43363 369 aaPredicted RBP26.02■■□□□ 1.76
COL13A1-210ENST00000517713 HTR6P50406 440 aa26.02■■□□□ 1.76
COL13A1-210ENST00000517713 CREB5Q02930 508 aa26.02■■□□□ 1.76
COL13A1-210ENST00000517713 FLOT2Q14254 428 aa26.02■■□□□ 1.76
COL13A1-210ENST00000517713 ATP6AP1LQ52LC2 224 aa26.02■■□□□ 1.76
COL13A1-210ENST00000517713 C6orf136Q5SQH8 315 aa26.02■■□□□ 1.76
COL13A1-210ENST00000517713 LAYNQ6UX15 382 aa26.02■■□□□ 1.76
COL13A1-210ENST00000517713 GPR149Q86SP6 731 aa26.02■■□□□ 1.76
COL13A1-210ENST00000517713 ASB11Q8WXH4 323 aa26.02■■□□□ 1.76
COL13A1-210ENST00000517713 DNAJC9Q8WXX5 260 aa26.02■■□□□ 1.76
COL13A1-210ENST00000517713 OR8D1Q8WZ84 308 aa26.02■■□□□ 1.76
COL13A1-210ENST00000517713 ROPN1LQ96C74 230 aa26.02■■□□□ 1.76
COL13A1-210ENST00000517713 RSRC1Q96IZ7 334 aaKnown RBP26.02■■□□□ 1.76
COL13A1-210ENST00000517713 VPS35Q96QK1 796 aa26.02■■□□□ 1.76
COL13A1-210ENST00000517713 PBX4Q9BYU1 374 aa26.02■■□□□ 1.76
COL13A1-210ENST00000517713 TRIM54Q9BYV2 358 aa26.02■■□□□ 1.76
COL13A1-210ENST00000517713 STK16O75716 305 aa26.02■■□□□ 1.76
COL13A1-210ENST00000517713 METAP1P53582 386 aa26.02■■□□□ 1.76
COL13A1-210ENST00000517713 CDKL1Q00532 357 aa26.02■■□□□ 1.76
COL13A1-210ENST00000517713 MS4A2Q01362 244 aa26.02■■□□□ 1.76
COL13A1-210ENST00000517713 LDLRAP1Q5SW96 308 aa26.02■■□□□ 1.76
COL13A1-210ENST00000517713 ZNF648Q5T619 568 aaPredicted RBP26.02■■□□□ 1.76
COL13A1-210ENST00000517713 TANGO2Q6ICL3 276 aa26.02■■□□□ 1.76
COL13A1-210ENST00000517713 NRSN1Q8IZ57 195 aa26.02■■□□□ 1.76
COL13A1-210ENST00000517713 ELMO1Q92556 727 aa26.02■■□□□ 1.76
COL13A1-210ENST00000517713 WRAP53Q9BUR4 548 aaKnown RBP26.02■■□□□ 1.76
COL13A1-210ENST00000517713 BRINP2Q9C0B6 783 aa26.02■■□□□ 1.76
COL13A1-210ENST00000517713 PSMD11O00231 422 aa26.01■■□□□ 1.75
COL13A1-210ENST00000517713 WNT9AO14904 365 aa26.01■■□□□ 1.75
COL13A1-210ENST00000517713 FTH1P02794 183 aa26.01■■□□□ 1.75
COL13A1-210ENST00000517713 EPB42P16452 691 aa26.01■■□□□ 1.75
COL13A1-210ENST00000517713 CAPN3P20807 821 aa26.01■■□□□ 1.75
COL13A1-210ENST00000517713 ITGB7P26010 798 aa26.01■■□□□ 1.75
COL13A1-210ENST00000517713 VPS26BQ4G0F5 336 aa26.01■■□□□ 1.75
COL13A1-210ENST00000517713 C8orf82Q6P1X6 216 aaPredicted RBP26.01■■□□□ 1.75
COL13A1-210ENST00000517713 RETREG3Q86VR2 466 aa26.01■■□□□ 1.75
COL13A1-210ENST00000517713 SFRP1Q8N474 314 aa26.01■■□□□ 1.75
COL13A1-210ENST00000517713 FNDC5Q8NAU1 212 aa26.01■■□□□ 1.75
COL13A1-210ENST00000517713 PIP4K2CQ8TBX8 421 aa26.01■■□□□ 1.75
COL13A1-210ENST00000517713 AP2M1Q96CW1 435 aa26.01■■□□□ 1.75
COL13A1-210ENST00000517713 SPAG4Q9NPE6 437 aa26.01■■□□□ 1.75
COL13A1-210ENST00000517713 MAP3K7O43318 606 aa26■■□□□ 1.75
COL13A1-210ENST00000517713 SYNCRIPO60506 623 aaKnown RBP26■■□□□ 1.75
COL13A1-210ENST00000517713 ZNF234Q14588 700 aa26■■□□□ 1.75
COL13A1-210ENST00000517713 PPP2R2DQ66LE6 453 aa26■■□□□ 1.75
COL13A1-210ENST00000517713 BLOC1S3Q6QNY0 202 aa26■■□□□ 1.75
COL13A1-210ENST00000517713 SFTPA1Q8IWL2 248 aa26■■□□□ 1.75
COL13A1-210ENST00000517713 BEND7Q8N7W2 519 aaPredicted RBP26■■□□□ 1.75
COL13A1-210ENST00000517713 GLYATL1Q969I3 302 aa26■■□□□ 1.75
COL13A1-210ENST00000517713 ARRDC3Q96B67 414 aa26■■□□□ 1.75
COL13A1-210ENST00000517713 NAF1Q96HR8 494 aaKnown RBP26■■□□□ 1.75
COL13A1-210ENST00000517713 C1orf50Q9BV19 199 aa26■■□□□ 1.75
COL13A1-210ENST00000517713 NTMT1Q9BV86 223 aa26■■□□□ 1.75
COL13A1-210ENST00000517713 ZFP14Q9HCL3 533 aa26■■□□□ 1.75
COL13A1-210ENST00000517713 MUC22E2RYF6 1773 aaPredicted RBP26■■□□□ 1.75
COL13A1-210ENST00000517713 LAMA3Q16787 3333 aa26■■□□□ 1.75
COL13A1-210ENST00000517713 EPOPA6NHQ4 379 aa26■■□□□ 1.75
COL13A1-210ENST00000517713 OR2AG2A6NM03 316 aa26■■□□□ 1.75
COL13A1-210ENST00000517713 QSOX1O00391 747 aa26■■□□□ 1.75
COL13A1-210ENST00000517713 ANGPT2O15123 496 aa26■■□□□ 1.75
COL13A1-210ENST00000517713 SLC16A5O15375 505 aa26■■□□□ 1.75
COL13A1-210ENST00000517713 HIST1H2AGP0C0S8 130 aaPredicted RBP26■■□□□ 1.75
COL13A1-210ENST00000517713 HIST1H2ADP20671 130 aa26■■□□□ 1.75
COL13A1-210ENST00000517713 GGT5P36269 586 aa26■■□□□ 1.75
COL13A1-210ENST00000517713 PIK3CGP48736 1102 aa26■■□□□ 1.75
COL13A1-210ENST00000517713 GTF2A1P52655 376 aaPredicted RBP26■■□□□ 1.75
COL13A1-210ENST00000517713 ABRAXAS2Q15018 415 aa26■■□□□ 1.75
COL13A1-210ENST00000517713 TTC23LQ6PF05 361 aa26■■□□□ 1.75
COL13A1-210ENST00000517713 VITQ6UXI7 678 aa26■■□□□ 1.75
COL13A1-210ENST00000517713 TERB1Q8NA31 727 aa26■■□□□ 1.75
COL13A1-210ENST00000517713 HIST1H2AHQ96KK5 128 aa26■■□□□ 1.75
COL13A1-210ENST00000517713 HIST1H2AJQ99878 128 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms