RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 HEBP2Q9Y5Z4 205 aa11.13□□□□□ -0.63
TRAPPC9-203ENST00000517667 CFAP20Q9Y6A4 193 aaKnown RBP11.13□□□□□ -0.63
TRAPPC9-203ENST00000517667 A0A1W2PQJ5 194 aa11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 OR2AG2A6NM03 316 aa11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 MYO1FO00160 1098 aa11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 E2F3O00716 465 aa11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 ZNF749O43361 778 aa11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 NDST3O95803 873 aa11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 STSP08842 583 aa11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 POLR2CP19387 275 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 CA5AP35218 305 aa11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 SPAM1P38567 509 aa11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 ARCN1P48444 511 aaKnown RBP11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 CTSCP53634 463 aa11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 KLHL30Q0D2K2 578 aa11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 ZBTB17Q13105 803 aa11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 AIMP2Q13155 320 aaKnown RBP11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 KRT33BQ14525 404 aa11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 PPP2R5EQ16537 467 aa11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 CYP2A13Q16696 494 aa11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 LONRF2Q1L5Z9 754 aa11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 ZNF385CQ66K41 422 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 FCRL6Q6DN72 434 aa11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 FBXO38Q6PIJ6 1188 aa11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 TMEM220Q6QAJ8 160 aa11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 SPOCD1Q6ZMY3 1216 aa11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 B4GALNT4Q76KP1 1039 aa11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 CNTD1Q8N815 330 aa11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 OR2Y1Q8NGV0 311 aa11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 LRRN4Q8WUT4 740 aa11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 FAR1Q8WVX9 515 aa11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 NACC2Q96BF6 587 aa11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 FAF2Q96CS3 445 aa11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 PPM1MQ96MI6 270 aa11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 PITPNM3Q9BZ71 974 aa11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 SLC25A51Q9H1U9 297 aa11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 BPIFA1Q9NP55 256 aa11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 IL26Q9NPH9 171 aa11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 ATP13A2Q9NQ11 1180 aa11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 P4HTMQ9NXG6 502 aa11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 NDOR1Q9UHB4 597 aa11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 PTRH2Q9Y3E5 179 aaKnown RBP11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 KLF2Q9Y5W3 355 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 AP1M2Q9Y6Q5 423 aa11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 FER1L5A0AVI2 2057 aa11.12□□□□□ -0.63
TRAPPC9-203ENST00000517667 SEC16AO15027 2179 aa11.11□□□□□ -0.63
TRAPPC9-203ENST00000517667 GLYATL1P3A0A0U1RQE8 302 aa11.11□□□□□ -0.63
TRAPPC9-203ENST00000517667 GSAPA4D1B5 854 aa11.11□□□□□ -0.63
TRAPPC9-203ENST00000517667 MGAT4DA6NG13 374 aa11.11□□□□□ -0.63
TRAPPC9-203ENST00000517667 AURKAO14965 403 aa11.11□□□□□ -0.63
TRAPPC9-203ENST00000517667 PBLDP30039 288 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC9-203ENST00000517667 PRDX3P30048 256 aaKnown RBP11.11□□□□□ -0.63
TRAPPC9-203ENST00000517667 ART3Q13508 389 aa11.11□□□□□ -0.63
TRAPPC9-203ENST00000517667 GSE1Q14687 1217 aa11.11□□□□□ -0.63
TRAPPC9-203ENST00000517667 KRTAP21-3Q3LHN1 58 aa11.11□□□□□ -0.63
TRAPPC9-203ENST00000517667 FNBP1LQ5T0N5 605 aa11.11□□□□□ -0.63
TRAPPC9-203ENST00000517667 IRAK1BP1Q5VVH5 260 aa11.11□□□□□ -0.63
TRAPPC9-203ENST00000517667 MLIPQ5VWP3 458 aa11.11□□□□□ -0.63
TRAPPC9-203ENST00000517667 DUS1LQ6P1R4 473 aaKnown RBP11.11□□□□□ -0.63
TRAPPC9-203ENST00000517667 APTXQ7Z2E3 356 aaKnown RBP11.11□□□□□ -0.63
TRAPPC9-203ENST00000517667 FJX1Q86VR8 437 aa11.11□□□□□ -0.63
TRAPPC9-203ENST00000517667 ACVR1CQ8NER5 493 aa11.11□□□□□ -0.63
TRAPPC9-203ENST00000517667 OR4E2Q8NGC2 313 aa11.11□□□□□ -0.63
TRAPPC9-203ENST00000517667 OR2L2Q8NH16 312 aa11.11□□□□□ -0.63
TRAPPC9-203ENST00000517667 PROKR1Q8TCW9 393 aa11.11□□□□□ -0.63
TRAPPC9-203ENST00000517667 GRHL3Q8TE85 626 aa11.11□□□□□ -0.63
TRAPPC9-203ENST00000517667 N4BP2L2Q92802 583 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC9-203ENST00000517667 TADA1Q96BN2 335 aa11.11□□□□□ -0.63
TRAPPC9-203ENST00000517667 PTERQ96BW5 349 aa11.11□□□□□ -0.63
TRAPPC9-203ENST00000517667 BTBD6Q96KE9 485 aa11.11□□□□□ -0.63
TRAPPC9-203ENST00000517667 GBP5Q96PP8 586 aa11.11□□□□□ -0.63
TRAPPC9-203ENST00000517667 TRAPPC9Q96Q05 1148 aa11.11□□□□□ -0.63
TRAPPC9-203ENST00000517667 AP1M1Q9BXS5 423 aa11.11□□□□□ -0.63
TRAPPC9-203ENST00000517667 SRMSQ9H3Y6 488 aa11.11□□□□□ -0.63
TRAPPC9-203ENST00000517667 ZBTB20Q9HC78 741 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC9-203ENST00000517667 SMOXQ9NWM0 555 aa11.11□□□□□ -0.63
TRAPPC9-203ENST00000517667 SPO11Q9Y5K1 396 aa11.11□□□□□ -0.63
TRAPPC9-203ENST00000517667 DCHS2Q6V1P9 2916 aa11.11□□□□□ -0.63
TRAPPC9-203ENST00000517667 CCDC88CQ9P219 2028 aa11.11□□□□□ -0.63
TRAPPC9-203ENST00000517667 ZGRF1Q86YA3 2104 aa11.11□□□□□ -0.63
TRAPPC9-203ENST00000517667 MDC1Q14676 2089 aaKnown RBP11.1□□□□□ -0.63
TRAPPC9-203ENST00000517667 CCDC168Q8NDH2 2452 aa11.1□□□□□ -0.63
TRAPPC9-203ENST00000517667 AGPSO00116 658 aa11.1□□□□□ -0.63
TRAPPC9-203ENST00000517667 DDX3YO15523 660 aaKnown RBP11.1□□□□□ -0.63
TRAPPC9-203ENST00000517667 ST6GAL1P15907 406 aa11.1□□□□□ -0.63
TRAPPC9-203ENST00000517667 MSH3P20585 1137 aa11.1□□□□□ -0.63
TRAPPC9-203ENST00000517667 AKT1P31749 480 aa11.1□□□□□ -0.63
TRAPPC9-203ENST00000517667 GJC1P36383 396 aa11.1□□□□□ -0.63
TRAPPC9-203ENST00000517667 TNNT3P45378 269 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC9-203ENST00000517667 LMAN1P49257 510 aa11.1□□□□□ -0.63
TRAPPC9-203ENST00000517667 DCDP81605 110 aaKnown RBP11.1□□□□□ -0.63
TRAPPC9-203ENST00000517667 AP1B1Q10567 949 aa11.1□□□□□ -0.63
TRAPPC9-203ENST00000517667 SLC10A2Q12908 348 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC9-203ENST00000517667 CDC16Q13042 620 aa11.1□□□□□ -0.63
TRAPPC9-203ENST00000517667 ZNF169Q14929 603 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC9-203ENST00000517667 ANO6Q4KMQ2 910 aa11.1□□□□□ -0.63
TRAPPC9-203ENST00000517667 GPRC6AQ5T6X5 926 aa11.1□□□□□ -0.63
TRAPPC9-203ENST00000517667 AGAP7PQ5VUJ5 663 aa11.1□□□□□ -0.63
TRAPPC9-203ENST00000517667 RHBDD2Q6NTF9 364 aa11.1□□□□□ -0.63
TRAPPC9-203ENST00000517667 FAM180AQ6UWF9 173 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms