RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 PHF10Q8WUB8 498 aaKnown RBP10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 HPS1Q92902 700 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 LRRC58Q96CX6 371 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 CHID1Q9BWS9 393 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 MIR1-1HGQ9H1L0 117 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 FAM83DQ9H4H8 585 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 NOL6Q9H6R4 1146 aaKnown RBP10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 RP1L1Q8IWN7 2480 aaPredicted RBP10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 TRIM43BA6NCK2 446 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 QSOX1O00391 747 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 DCLK1O15075 740 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 GRM6O15303 877 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 GUCY1B2O75343 617 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 OR4F21O95013 312 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 SIX3O95343 332 aaPredicted RBP10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 KRT75O95678 551 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 MTHFRP42898 656 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 POLR2JP52435 117 aaKnown RBP10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 TXNL4AP83876 142 aaKnown RBP10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 CREMQ03060 361 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 RAB39AQ14964 217 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 ARMC4Q5T2S8 1044 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 CERS6Q6ZMG9 384 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 PARGQ86W56 976 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 WDR36Q8NI36 951 aaKnown RBP10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 OR8D1Q8WZ84 308 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 AP2M1Q96CW1 435 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 VPS35Q96QK1 796 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 SEZ6LQ9BYH1 1024 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 MUC13Q9H3R2 512 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 SOX17Q9H6I2 414 aaPredicted RBP10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 KLHL1Q9NR64 748 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 CREBZFQ9NS37 354 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 KLHL3Q9UH77 587 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 MAGEL2Q9UJ55 1249 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 TBC1D30Q9Y2I9 924 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 N6AMT1Q9Y5N5 214 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 C7orf72A4D263 438 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 FAM25AB3EWG3 89 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 FAM25CB3EWG5 89 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 FAM25GB3EWG6 89 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 G3V2T6 193 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 SCAMP1O15126 338 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 NBNO60934 754 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 PRKCGP05129 697 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 MYL12AP19105 171 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 GALNT2Q10471 571 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 EIF2B5Q13144 721 aaKnown RBP10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 TOP3AQ13472 1001 aaPredicted RBP10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 HLA-DQA1Q5Y7H0 255 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 FGD2Q7Z6J4 655 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 SERPINA9Q86WD7 417 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 CENPSQ8N2Z9 138 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 LEMD2Q8NC56 503 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 BRSK1Q8TDC3 778 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 CENPIQ92674 756 aaPredicted RBP10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 AHCYL2Q96HN2 611 aaKnown RBP10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 ZNF597Q96LX8 424 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 FCRL5Q96RD9 977 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 TRIM8Q9BZR9 551 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 AASDHPPTQ9NRN7 309 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 ADGRE2Q9UHX3 823 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 EIF2B4Q9UI10 523 aaKnown RBP10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 RPS6KA6Q9UK32 745 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 ITGB1BP2Q9UKP3 347 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 FBXL21Q9UKT6 434 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 RAB23Q9ULC3 237 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 ARIH1Q9Y4X5 557 aaPredicted RBP10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 SLC38A8A6NNN8 435 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 NADKO95544 446 aaPredicted RBP10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 IFNA16P05015 189 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 EPHX1P07099 455 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 GJA1P17302 382 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 EFNA1P20827 205 aaPredicted RBP10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 RPL10P27635 214 aaKnown RBP10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 ARRB2P32121 409 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 SPAM1P38567 509 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 GUCA1AP43080 201 aaPredicted RBP10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 DNAJB13P59910 316 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 IL10RBQ08334 325 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 SMYD5Q6GMV2 418 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 FBXL22Q6P050 247 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 MACC1Q6ZN28 852 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 IFNL1Q8IU54 200 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 CHERPQ8IWX8 916 aaKnown RBP10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 SIDT2Q8NBJ9 832 aaKnown RBP10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 PDPRQ8NCN5 879 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 TRPV3Q8NET8 790 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 TAMM41Q96BW9 452 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 FERD3LQ96RJ6 166 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 CCSER2Q9H7U1 834 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 LRTM1Q9HBL6 345 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 FAIMQ9NVQ4 179 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 KCTD5Q9NXV2 234 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 A0A0U1RQF3 1178 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 PIPSLA2A3N6 862 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 MYL12BO14950 172 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 CAPN1P07384 714 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 TCF3P15923 654 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 ZNF182P17025 639 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms