RNA–Protein interactions for RNA: ENST00000515343.1

AC025539.1-201, humanhuman

TSL 2 BASIC

Gene AC025539.1, Length 4,019 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025539.1-201ENST00000515343 NFKBIL1Q9UBC1 381 aaPredicted RBP1.65□□□□□ -2.15
AC025539.1-201ENST00000515343 FBXO4Q9UKT5 387 aa1.65□□□□□ -2.15
AC025539.1-201ENST00000515343 CSMD2Q7Z408 3487 aa1.65□□□□□ -2.15
AC025539.1-201ENST00000515343 TONSLQ96HA7 1378 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 RPS10-NUDT3A0A1W2PQS6 291 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 MAGEA13PA6NCF6 341 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 BECN2A8MW95 431 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 IFNL4K9M1U5 179 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 KRT36O76013 467 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 STX2P32856 288 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 SLC15A1P46059 708 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 P2RX3P56373 397 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 LMOD3Q0VAK6 560 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 TRAF3Q13114 568 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 KIF19Q2TAC6 998 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 DEFB115Q30KQ5 88 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 ZNF628Q5EBL2 1059 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 SPOUT1Q5T280 376 aaKnown RBP1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 GRTP1Q5TC63 336 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 ADALQ6DHV7 355 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 INTS8Q75QN2 995 aaKnown RBP1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 SHFQ7M4L6 423 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 ZDHHC17Q8IUH5 632 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 ZCCHC9Q8N567 271 aaKnown RBP1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 ZNF548Q8NEK5 533 aaPredicted RBP1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 EXD1Q8NHP7 514 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 SGK494Q96LW2 274 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 DUX5Q96PT3 197 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 HEMGNQ9BXL5 484 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 HRH4Q9H3N8 390 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 A0A1W2PQ09 198 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 TYW5A2RUC4 315 aaKnown RBP1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 CD8B2A6NJW9 211 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 INAFM1C9JVW0 142 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 PTGES3LE9PB15 166 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 SMAD6O43541 496 aaKnown RBP1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 RARGP13631 454 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 SUOXP51687 545 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 CLDN20P56880 219 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 LINC00205P59089 165 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 SCARB2Q14108 478 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 SHROOM1Q2M3G4 852 aaPredicted RBP1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 ODF3L2Q3SX64 289 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 NSUN5P2Q63ZY6 315 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 KIAA0930Q6ICG6 404 aaPredicted RBP1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 NOTUMQ6P988 496 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 FBXO46Q6PJ61 603 aaPredicted RBP1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 SHC4Q6S5L8 630 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 KBTBD6Q86V97 674 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 PCDH20Q8N6Y1 951 aaKnown RBP1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 C9orf106Q8NAJ2 232 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 PPFIBP2Q8ND30 876 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 GPT2Q8TD30 523 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 MIB2Q96AX9 1013 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 CDHR1Q96JP9 859 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 ZNF778Q96MU6 729 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 NUDT16L1Q9BRJ7 211 aaKnown RBP1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 SDF4Q9BRK5 362 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 TTYH1Q9H313 450 aaPredicted RBP1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 ACSS1Q9NUB1 689 aaPredicted RBP1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 SETD4Q9NVD3 440 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 ZNF224Q9NZL3 707 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 CFDP1Q9UEE9 299 aaPredicted RBP1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 MKLN1Q9UL63 735 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 NOL7Q9UMY1 257 aaKnown RBP1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 ALPK3Q96L96 1907 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 FAM205AQ6ZU69 1335 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 RAD50Q92878 1312 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 RYR1P21817 5038 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 ANKRD36BQ8N2N9 1353 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 MON2Q7Z3U7 1717 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 A0A1W2PPI3 338 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 IPO8O15397 1037 aaKnown RBP1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 INSIG1O15503 277 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 AVILO75366 819 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 SFTPCP11686 197 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 GLULP15104 373 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 AKR1B1P15121 316 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 SLC6A6P31641 620 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 NRIP1P48552 1158 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 THBS3P49746 956 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 PDLIM4P50479 330 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 ASCL1P50553 236 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 CLCN3P51790 818 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 BNC1Q01954 994 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 PTPRCAPQ14761 206 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 KIR2DS3Q14952 304 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 KRT80Q6KB66 452 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 SLC30A6Q6NXT4 461 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 TSSK4Q6SA08 328 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 LCTLQ6UWM7 567 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 B3GNT6Q6ZMB0 384 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 LMNTD2Q8IXW0 634 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 MB21D2Q8IYB1 491 aaPredicted RBP1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 TAS1R2Q8TE23 839 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 NLRP4Q96MN2 994 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 MPHOSPH8Q99549 860 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 MEIS3Q99687 375 aa1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 SPRTNQ9H040 489 aaPredicted RBP1.64□□□□□ -2.15
AC025539.1-201ENST00000515343 WNT5BQ9H1J7 359 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms