RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 ACVR1CQ8NER5 493 aa10.19□□□□□ -0.78
HMGXB3-205ENST00000514469 OR52K1Q8NGK4 314 aa10.19□□□□□ -0.78
HMGXB3-205ENST00000514469 OR13J1Q8NGT2 312 aa10.19□□□□□ -0.78
HMGXB3-205ENST00000514469 STAMBPL1Q96FJ0 436 aa10.19□□□□□ -0.78
HMGXB3-205ENST00000514469 ELMO2Q96JJ3 720 aa10.19□□□□□ -0.78
HMGXB3-205ENST00000514469 ADNPQ9H2P0 1102 aa10.19□□□□□ -0.78
HMGXB3-205ENST00000514469 PDE7BQ9NP56 450 aa10.19□□□□□ -0.78
HMGXB3-205ENST00000514469 HRASLS2Q9NWW9 162 aa10.19□□□□□ -0.78
HMGXB3-205ENST00000514469 GEMIN8Q9NWZ8 242 aaKnown RBP10.19□□□□□ -0.78
HMGXB3-205ENST00000514469 RPS6KL1Q9Y6S9 549 aa10.19□□□□□ -0.78
HMGXB3-205ENST00000514469 COLEC10Q9Y6Z7 277 aa10.19□□□□□ -0.78
HMGXB3-205ENST00000514469 UBA6A0AVT1 1052 aaPredicted RBP10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 OR6C74A6NCV1 312 aa10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 OR51F1A6NGY5 319 aa10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 J3QKU1 62 aa10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 NKX2-8O15522 239 aa10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 IFNB1P01574 187 aa10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 POLBP06746 335 aa10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 EBLN1P0CF75 366 aa10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 F8A1P23610 371 aa10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 MSNP26038 577 aaKnown RBP10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 OAS2P29728 719 aaKnown RBP10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 NSG1P42857 185 aa10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 CD151P48509 253 aa10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 POLE2P56282 527 aa10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 HSD11B2P80365 405 aa10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 MC1RQ01726 317 aa10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 ACY1Q03154 408 aa10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 ACVR1Q04771 509 aa10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 SEMA5AQ13591 1074 aa10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 ITIH4Q14624 930 aa10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 GSE1Q14687 1217 aa10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 SIX1Q15475 284 aaPredicted RBP10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 SKIDA1Q1XH10 827 aa10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 CCDC38Q502W7 563 aa10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 ZNF662Q6ZS27 426 aa10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 TAS2R42Q7RTR8 314 aa10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 D2HGDHQ8N465 521 aa10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 CLDN19Q8N6F1 224 aa10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 DNAAF3Q8N9W5 541 aa10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 C1orf54Q8WWF1 131 aa10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 RNF31Q96EP0 1072 aa10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 FCRL4Q96PJ5 515 aa10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 RANBP9Q96S59 729 aa10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 ETNK1Q9HBU6 452 aa10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 LNPEPQ9UIQ6 1025 aa10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 TUBD1Q9UJT1 453 aa10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 CROTQ9UKG9 612 aa10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 POMT2Q9UKY4 750 aa10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 RARRES3Q9UL19 164 aa10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 RIMKLBQ9ULI2 386 aa10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 BTRCQ9Y297 605 aa10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 PCDHGA6Q9Y5G7 932 aa10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 MRPS18BQ9Y676 258 aaKnown RBP10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 UBR5O95071 2799 aaPredicted RBP10.18□□□□□ -0.78
HMGXB3-205ENST00000514469 CCDC78A2IDD5 438 aa10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 HEATR9A2RTY3 570 aa10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 CCDC162PA2VCL2 907 aa10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 MATN2O00339 956 aa10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 QSOX1O00391 747 aa10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 IFRD1O00458 451 aaPredicted RBP10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 LIN7AO14910 233 aaPredicted RBP10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 SLC28A2O43868 658 aa10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 ZBTB11O95625 1053 aaPredicted RBP10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 MT-ND3P03897 115 aa10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 PRKAR1AP10644 381 aa10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 ETS1P14921 441 aa10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 POLR2CP19387 275 aaPredicted RBP10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 PDHA2P29803 388 aa10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 DLSTP36957 453 aa10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 GRIA1P42261 906 aa10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 CCR10P46092 362 aa10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 PREPP48147 710 aa10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 ARCN1P48444 511 aaKnown RBP10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 TUBB4BP68371 445 aa10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 KCNAB2Q13303 367 aa10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 LAMB3Q13751 1172 aa10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 TUBB2AQ13885 445 aa10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 BOP1Q14137 746 aaKnown RBP10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 RPS6KA1Q15418 735 aa10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 TSTD2Q5T7W7 516 aa10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 ATP1A1-AS1Q5TC04 95 aa10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 PWWP2BQ6NUJ5 590 aa10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 ARMC6Q6NXE6 501 aa10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 AFTPHQ6ULP2 937 aa10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 PPP1R21Q6ZMI0 780 aa10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 PRUNE1Q86TP1 453 aa10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 BPHLQ86WA6 291 aaPredicted RBP10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 GLIS1Q8NBF1 620 aa10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 OR52E1Q8NGJ3 308 aa10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 ZNF501Q96CX3 271 aaPredicted RBP10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 PPM1MQ96MI6 270 aa10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 ALS2CR12Q96Q35 445 aa10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 TUBB2BQ9BVA1 445 aa10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 SLC25A18Q9H1K4 315 aa10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 TFB2MQ9H5Q4 396 aaKnown RBP10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 MVB12BQ9H7P6 319 aa10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 CASS4Q9NQ75 786 aa10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 RAB6BQ9NRW1 208 aa10.17□□□□□ -0.78
HMGXB3-205ENST00000514469 FGF21Q9NSA1 209 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms