RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 VPS4AQ9UN37 437 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 SNX6Q9UNH7 406 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 CORO2BQ9UQ03 480 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 C5P01031 1676 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 PRMT5O14744 637 aaPredicted RBP11.1□□□□□ -0.63
TCOF1-211ENST00000513346 ACOX3O15254 700 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 AP1G1O43747 822 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 SNX4O95219 450 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 CYP2A6P11509 494 aaPredicted RBP11.1□□□□□ -0.63
TCOF1-211ENST00000513346 FEN1P39748 380 aaKnown RBP11.1□□□□□ -0.63
TCOF1-211ENST00000513346 OPRL1P41146 370 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 PPP5CP53041 499 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 ATP6AP1Q15904 470 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 CYP4V2Q6ZWL3 525 aaPredicted RBP11.1□□□□□ -0.63
TCOF1-211ENST00000513346 RD3Q7Z3Z2 195 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 ADAMTSL2Q86TH1 951 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 MMAAQ8IVH4 418 aaKnown RBP11.1□□□□□ -0.63
TCOF1-211ENST00000513346 PYROXD2Q8N2H3 581 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 CCDC185Q8N715 623 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 ZNF486Q96H40 463 aaPredicted RBP11.1□□□□□ -0.63
TCOF1-211ENST00000513346 TTPALQ9BTX7 342 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 DHRS4Q9BTZ2 278 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 NFKBIZQ9BYH8 718 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 EXD2Q9NVH0 621 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 RBPJLQ9UBG7 517 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 SLC9A8Q9Y2E8 581 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 C9P02748 559 aa11.09□□□□□ -0.63
TCOF1-211ENST00000513346 L1CAMP32004 1257 aa11.09□□□□□ -0.63
TCOF1-211ENST00000513346 SLC9A3P48764 834 aa11.09□□□□□ -0.63
TCOF1-211ENST00000513346 TBRG1Q3YBR2 411 aa11.09□□□□□ -0.63
TCOF1-211ENST00000513346 CCBE1Q6UXH8 406 aaPredicted RBP11.09□□□□□ -0.63
TCOF1-211ENST00000513346 MON1AQ86VX9 555 aa11.09□□□□□ -0.63
TCOF1-211ENST00000513346 GPR22Q99680 433 aa11.09□□□□□ -0.63
TCOF1-211ENST00000513346 SLC29A1Q99808 456 aa11.09□□□□□ -0.63
TCOF1-211ENST00000513346 PDZD7Q9H5P4 517 aa11.09□□□□□ -0.63
TCOF1-211ENST00000513346 PHF11Q9UIL8 331 aa11.09□□□□□ -0.63
TCOF1-211ENST00000513346 FBXO9Q9UK97 447 aaPredicted RBP11.09□□□□□ -0.63
TCOF1-211ENST00000513346 MYH3P11055 1940 aa11.09□□□□□ -0.63
TCOF1-211ENST00000513346 A8MT66 165 aa11.09□□□□□ -0.63
TCOF1-211ENST00000513346 CHRNA1P02708 482 aa11.09□□□□□ -0.63
TCOF1-211ENST00000513346 OR56A5P0C7T3 313 aa11.09□□□□□ -0.63
TCOF1-211ENST00000513346 DGKAP23743 735 aa11.09□□□□□ -0.63
TCOF1-211ENST00000513346 HPCAL1P37235 193 aa11.09□□□□□ -0.63
TCOF1-211ENST00000513346 GNPDA1P46926 289 aa11.09□□□□□ -0.63
TCOF1-211ENST00000513346 PGM2L1Q6PCE3 622 aa11.09□□□□□ -0.63
TCOF1-211ENST00000513346 BHLHB9Q6PI77 547 aa11.09□□□□□ -0.63
TCOF1-211ENST00000513346 GOLM1Q8NBJ4 401 aa11.09□□□□□ -0.63
TCOF1-211ENST00000513346 SPPL2BQ8TCT7 592 aa11.09□□□□□ -0.63
TCOF1-211ENST00000513346 CHPT1Q8WUD6 406 aa11.09□□□□□ -0.63
TCOF1-211ENST00000513346 SNX27Q96L92 541 aa11.09□□□□□ -0.63
TCOF1-211ENST00000513346 OXCT2Q9BYC2 517 aaPredicted RBP11.09□□□□□ -0.63
TCOF1-211ENST00000513346 TM6SF2Q9BZW4 377 aa11.09□□□□□ -0.63
TCOF1-211ENST00000513346 PTGFRNQ9P2B2 879 aa11.09□□□□□ -0.63
TCOF1-211ENST00000513346 CYP2A7P20853 494 aa11.09□□□□□ -0.63
TCOF1-211ENST00000513346 RORCP51449 518 aa11.09□□□□□ -0.63
TCOF1-211ENST00000513346 KCNJ8Q15842 424 aa11.09□□□□□ -0.63
TCOF1-211ENST00000513346 FBXO43Q4G163 708 aa11.09□□□□□ -0.63
TCOF1-211ENST00000513346 DDI2Q5TDH0 399 aa11.09□□□□□ -0.63
TCOF1-211ENST00000513346 CYS1Q717R9 158 aa11.09□□□□□ -0.63
TCOF1-211ENST00000513346 ZC3HC1Q86WB0 502 aaKnown RBP11.09□□□□□ -0.63
TCOF1-211ENST00000513346 OR4L1Q8NH43 312 aa11.09□□□□□ -0.63
TCOF1-211ENST00000513346 SIPA1Q96FS4 1042 aa11.09□□□□□ -0.63
TCOF1-211ENST00000513346 CAPN10Q9HC96 672 aa11.09□□□□□ -0.63
TCOF1-211ENST00000513346 KRCC1Q9NPI7 259 aaPredicted RBP11.09□□□□□ -0.63
TCOF1-211ENST00000513346 RIMS3Q9UJD0 308 aa11.09□□□□□ -0.63
TCOF1-211ENST00000513346 SDHDO14521 159 aa11.08□□□□□ -0.63
TCOF1-211ENST00000513346 STAU1O95793 577 aaKnown RBP11.08□□□□□ -0.63
TCOF1-211ENST00000513346 GSTM2P28161 218 aa11.08□□□□□ -0.63
TCOF1-211ENST00000513346 PPP2R1BP30154 601 aa11.08□□□□□ -0.63
TCOF1-211ENST00000513346 TTPAP49638 278 aa11.08□□□□□ -0.63
TCOF1-211ENST00000513346 GPR15P49685 360 aa11.08□□□□□ -0.63
TCOF1-211ENST00000513346 AFTPHQ6ULP2 937 aa11.08□□□□□ -0.63
TCOF1-211ENST00000513346 TRPV1Q8NER1 839 aa11.08□□□□□ -0.63
TCOF1-211ENST00000513346 GPR152Q8TDT2 470 aa11.08□□□□□ -0.63
TCOF1-211ENST00000513346 MIEF1Q9NQG6 463 aa11.08□□□□□ -0.63
TCOF1-211ENST00000513346 NECTIN3Q9NQS3 549 aa11.08□□□□□ -0.63
TCOF1-211ENST00000513346 SNTG1Q9NSN8 517 aa11.08□□□□□ -0.63
TCOF1-211ENST00000513346 SFMBT1Q9UHJ3 866 aa11.08□□□□□ -0.63
TCOF1-211ENST00000513346 TSPAN1O60635 241 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 ATF6P18850 670 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 PPIBP23284 216 aaKnown RBP11.08□□□□□ -0.64
TCOF1-211ENST00000513346 DUSP4Q13115 394 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 SLC13A2Q13183 592 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 GK3PQ14409 553 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 USP45Q70EL2 814 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 DPP10Q8N608 796 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 STYXQ8WUJ0 223 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 SLC30A2Q9BRI3 323 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 ZDHHC6Q9H6R6 413 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 CNTN3Q9P232 1028 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 IFT52Q9Y366 437 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 A0A1W2PP18 115 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 FAM92AA1XBS5 289 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 FAM47E-STBD1D6RA91 191 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 TNFRSF11BO00300 401 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 NUAK1O60285 661 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 ATE1O95260 518 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 CXCL14O95715 111 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 ANXA5P08758 320 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 CCR10P46092 362 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms