RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 ARRDC1-AS1Q9H2J1 176 aa12.28□□□□□ -0.44
PDPN-210ENST00000513143 DPEP2Q9H4A9 486 aa12.28□□□□□ -0.44
PDPN-210ENST00000513143 CAAP1Q9H8G2 361 aa12.28□□□□□ -0.44
PDPN-210ENST00000513143 SSU72Q9NP77 194 aaKnown RBP12.28□□□□□ -0.44
PDPN-210ENST00000513143 IGSF5Q9NSI5 407 aa12.28□□□□□ -0.44
PDPN-210ENST00000513143 PCMTD2Q9NV79 361 aa12.28□□□□□ -0.44
PDPN-210ENST00000513143 MKS1Q9NXB0 559 aa12.28□□□□□ -0.44
PDPN-210ENST00000513143 FAM8A1Q9UBU6 413 aa12.28□□□□□ -0.44
PDPN-210ENST00000513143 APOBEC3BQ9UH17 382 aaKnown RBP12.28□□□□□ -0.44
PDPN-210ENST00000513143 KCNK6Q9Y257 313 aa12.28□□□□□ -0.44
PDPN-210ENST00000513143 LAMA1P25391 3075 aa12.27□□□□□ -0.44
PDPN-210ENST00000513143 HMGB1P1B2RPK0 211 aaPredicted RBP12.27□□□□□ -0.45
PDPN-210ENST00000513143 PATE3B3GLJ2 98 aa12.27□□□□□ -0.45
PDPN-210ENST00000513143 H3BM21 787 aa12.27□□□□□ -0.45
PDPN-210ENST00000513143 KLHL2O95198 593 aa12.27□□□□□ -0.45
PDPN-210ENST00000513143 CFIP05156 583 aa12.27□□□□□ -0.45
PDPN-210ENST00000513143 GSTA1P08263 222 aa12.27□□□□□ -0.45
PDPN-210ENST00000513143 MPC1LP0DKB6 136 aa12.27□□□□□ -0.45
PDPN-210ENST00000513143 CTSEP14091 401 aa12.27□□□□□ -0.45
PDPN-210ENST00000513143 CREB1P16220 341 aa12.27□□□□□ -0.45
PDPN-210ENST00000513143 IDSP22304 550 aa12.27□□□□□ -0.45
PDPN-210ENST00000513143 AK4P27144 223 aaPredicted RBP12.27□□□□□ -0.45
PDPN-210ENST00000513143 PDHA2P29803 388 aa12.27□□□□□ -0.45
PDPN-210ENST00000513143 CRHR1P34998 444 aa12.27□□□□□ -0.45
PDPN-210ENST00000513143 ILF3Q12906 894 aaKnown RBP eCLIP12.27□□□□□ -0.45
PDPN-210ENST00000513143 GRIK2Q13002 908 aa12.27□□□□□ -0.45
PDPN-210ENST00000513143 GPS2Q13227 327 aa12.27□□□□□ -0.45
PDPN-210ENST00000513143 CSHL1Q14406 222 aa12.27□□□□□ -0.45
PDPN-210ENST00000513143 ZNF423Q2M1K9 1284 aa12.27□□□□□ -0.45
PDPN-210ENST00000513143 FAM83EQ2M2I3 478 aa12.27□□□□□ -0.45
PDPN-210ENST00000513143 TRIM61Q5EBN2 209 aa12.27□□□□□ -0.45
PDPN-210ENST00000513143 PLA2G2CQ5R387 149 aa12.27□□□□□ -0.45
PDPN-210ENST00000513143 PRAMEF14Q5SWL7 426 aa12.27□□□□□ -0.45
PDPN-210ENST00000513143 WASH2PQ6VEQ5 465 aa12.27□□□□□ -0.45
PDPN-210ENST00000513143 KCTD4Q8WVF5 259 aa12.27□□□□□ -0.45
PDPN-210ENST00000513143 NXNL1Q96CM4 212 aa12.27□□□□□ -0.45
PDPN-210ENST00000513143 GPR78Q96P69 363 aa12.27□□□□□ -0.45
PDPN-210ENST00000513143 ELF4Q99607 663 aaPredicted RBP12.27□□□□□ -0.45
PDPN-210ENST00000513143 LRRC61Q9BV99 259 aa12.27□□□□□ -0.45
PDPN-210ENST00000513143 GSDMCQ9BYG8 508 aa12.27□□□□□ -0.45
PDPN-210ENST00000513143 ZDHHC5Q9C0B5 715 aa12.27□□□□□ -0.45
PDPN-210ENST00000513143 OR52A5Q9H2C5 316 aa12.27□□□□□ -0.45
PDPN-210ENST00000513143 OSGEPL1Q9H4B0 414 aa12.27□□□□□ -0.45
PDPN-210ENST00000513143 NMRAL1Q9HBL8 299 aa12.27□□□□□ -0.45
PDPN-210ENST00000513143 MED4Q9NPJ6 270 aa12.27□□□□□ -0.45
PDPN-210ENST00000513143 WASH6PQ9NQA3 447 aa12.27□□□□□ -0.45
PDPN-210ENST00000513143 SPASTQ9UBP0 616 aa12.27□□□□□ -0.45
PDPN-210ENST00000513143 DCDC2Q9UHG0 476 aa12.27□□□□□ -0.45
PDPN-210ENST00000513143 PCOLCE2Q9UKZ9 415 aa12.27□□□□□ -0.45
PDPN-210ENST00000513143 RUVBL2Q9Y230 463 aaKnown RBP12.27□□□□□ -0.45
PDPN-210ENST00000513143 COPEO14579 308 aa12.26□□□□□ -0.45
PDPN-210ENST00000513143 TYROBPO43914 113 aa12.26□□□□□ -0.45
PDPN-210ENST00000513143 DFNA5O60443 496 aa12.26□□□□□ -0.45
PDPN-210ENST00000513143 GLRA3O75311 464 aa12.26□□□□□ -0.45
PDPN-210ENST00000513143 PIAS2O75928 621 aa12.26□□□□□ -0.45
PDPN-210ENST00000513143 MATN4O95460 622 aa12.26□□□□□ -0.45
PDPN-210ENST00000513143 RETP07949 1114 aa12.26□□□□□ -0.45
PDPN-210ENST00000513143 CELA2BP08218 269 aaPredicted RBP12.26□□□□□ -0.45
PDPN-210ENST00000513143 CD1DP15813 335 aa12.26□□□□□ -0.45
PDPN-210ENST00000513143 ACADLP28330 430 aa12.26□□□□□ -0.45
PDPN-210ENST00000513143 ACTR1BP42025 376 aa12.26□□□□□ -0.45
PDPN-210ENST00000513143 CCT5P48643 541 aa12.26□□□□□ -0.45
PDPN-210ENST00000513143 ACTR1AP61163 376 aa12.26□□□□□ -0.45
PDPN-210ENST00000513143 ATP6V0D1P61421 351 aa12.26□□□□□ -0.45
PDPN-210ENST00000513143 ACAP2Q15057 778 aa12.26□□□□□ -0.45
PDPN-210ENST00000513143 ELOCQ15369 112 aa12.26□□□□□ -0.45
PDPN-210ENST00000513143 SHBQ15464 509 aa12.26□□□□□ -0.45
PDPN-210ENST00000513143 TSNAXIP1Q2TAA8 658 aa12.26□□□□□ -0.45
PDPN-210ENST00000513143 HSP90B2PQ58FF3 399 aa12.26□□□□□ -0.45
PDPN-210ENST00000513143 PRRT3Q5FWE3 981 aa12.26□□□□□ -0.45
PDPN-210ENST00000513143 AGAP9Q5VTM2 703 aa12.26□□□□□ -0.45
PDPN-210ENST00000513143 IL27RAQ6UWB1 636 aa12.26□□□□□ -0.45
PDPN-210ENST00000513143 ABRAXAS1Q6UWZ7 409 aa12.26□□□□□ -0.45
PDPN-210ENST00000513143 CDHR3Q6ZTQ4 885 aa12.26□□□□□ -0.45
PDPN-210ENST00000513143 PIWIL4Q7Z3Z4 852 aaKnown RBP12.26□□□□□ -0.45
PDPN-210ENST00000513143 MYO1HQ8N1T3 1032 aa12.26□□□□□ -0.45
PDPN-210ENST00000513143 SDR16C5Q8N3Y7 309 aa12.26□□□□□ -0.45
PDPN-210ENST00000513143 FSTL5Q8N475 847 aaPredicted RBP12.26□□□□□ -0.45
PDPN-210ENST00000513143 SPATA6LQ8N4H0 392 aa12.26□□□□□ -0.45
PDPN-210ENST00000513143 ATOH1Q92858 354 aaPredicted RBP12.26□□□□□ -0.45
PDPN-210ENST00000513143 APOPT1Q96IL0 206 aa12.26□□□□□ -0.45
PDPN-210ENST00000513143 ZNF358Q9NW07 568 aa12.26□□□□□ -0.45
PDPN-210ENST00000513143 TBC1D29Q9UFV1 150 aa12.26□□□□□ -0.45
PDPN-210ENST00000513143 GPR179Q6PRD1 2367 aa12.25□□□□□ -0.45
PDPN-210ENST00000513143 CCDC189A1A4V9 331 aa12.25□□□□□ -0.45
PDPN-210ENST00000513143 A6NCN8 305 aa12.25□□□□□ -0.45
PDPN-210ENST00000513143 ARHGAP33O14559 1287 aa12.25□□□□□ -0.45
PDPN-210ENST00000513143 KHNYNO15037 678 aaKnown RBP12.25□□□□□ -0.45
PDPN-210ENST00000513143 PRPF4O43172 522 aaKnown RBP eCLIP12.25□□□□□ -0.45
PDPN-210ENST00000513143 AQP9O43315 295 aa12.25□□□□□ -0.45
PDPN-210ENST00000513143 ZBTB14O43829 449 aa12.25□□□□□ -0.45
PDPN-210ENST00000513143 SPAG7O75391 227 aa12.25□□□□□ -0.45
PDPN-210ENST00000513143 TOP3BO95985 862 aaKnown RBP12.25□□□□□ -0.45
PDPN-210ENST00000513143 SYPP08247 313 aa12.25□□□□□ -0.45
PDPN-210ENST00000513143 SLC35G4P0C7Q5 338 aa12.25□□□□□ -0.45
PDPN-210ENST00000513143 BRAFP15056 766 aa12.25□□□□□ -0.45
PDPN-210ENST00000513143 RPL10P27635 214 aaKnown RBP12.25□□□□□ -0.45
PDPN-210ENST00000513143 NBL1P41271 181 aa12.25□□□□□ -0.45
PDPN-210ENST00000513143 ARRB1P49407 418 aaPredicted RBP12.25□□□□□ -0.45
PDPN-210ENST00000513143 IRX4P78413 519 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms