RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 NOVA2Q9UNW9 492 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 AP4E1Q9UPM8 1137 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 MGAM2Q2M2H8 2515 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 ARL5CA6NH57 179 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 M0R129 80 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 DDX39AO00148 427 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 RIMBP2O15034 1052 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 OPHN1O60890 802 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 SPAG7O75391 227 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 STK17BO94768 372 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 OR6A2O95222 327 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 INHAP05111 366 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 ASNSP08243 561 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 CLTBP09497 229 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 ATXN1LP0C7T5 689 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 GSTM2P28161 218 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 PPP2R1BP30154 601 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 RCVRNP35243 200 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 CLK3P49761 638 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 HLCSP50747 726 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 TPTEP56180 551 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 KHDRBS1Q07666 443 aaKnown RBP eCLIP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 DNAJC3Q13217 504 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 BIKQ13323 160 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 MAD2L1BPQ15013 274 aaPredicted RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 CARTPTQ16568 116 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 EML3Q32P44 896 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 FAM98BQ52LJ0 330 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 RALGPS1Q5JS13 557 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 SYCP2LQ5T4T6 812 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 INTS11Q5TA45 600 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 BICRALQ6AI39 1079 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 PM20D1Q6GTS8 502 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 GRHL2Q6ISB3 625 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 ULK3Q6PHR2 472 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 CCDC137Q6PK04 289 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 KLHL17Q6TDP4 642 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 LINC00299Q6ZSB3 139 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 UBE2R2Q712K3 238 aaPredicted RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 PCGF5Q86SE9 256 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 NLRP8Q86W28 1048 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 CEP97Q8IW35 865 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 DNAAF3Q8N9W5 541 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZSCAN4Q8NAM6 433 aaPredicted RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 ANKRD49Q8WVL7 239 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 AKAP1Q92667 903 aaKnown RBP eCLIP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 THRSPQ92748 146 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 USP13Q92995 863 aaPredicted RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 PTERQ96BW5 349 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 RNFT2Q96EX2 444 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 POM121Q96HA1 1249 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 NEDD4LQ96PU5 975 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 CDRT15Q96T59 188 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 SMAD5Q99717 465 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 THUMPD3Q9BV44 507 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 CPEB1Q9BZB8 566 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNF556Q9HAH1 456 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 TRPC7Q9HCX4 862 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 DDX28Q9NUL7 540 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 FGFR1OP2Q9NVK5 253 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 FAIMQ9NVQ4 179 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 ARMC1Q9NVT9 282 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 CRYL1Q9Y2S2 319 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 TDRKHQ9Y2W6 561 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 COLEC10Q9Y6Z7 277 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 CCDC195A0A1B0GUA6 201 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 TCRBV9S1A1TA0A576 114 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 SERTM1A2A2V5 107 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 GSAPA4D1B5 854 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 C2orf78A6NCI8 922 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 hCG_1984214I3L0E3 225 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 PTGESO14684 152 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 SLC16A3O15427 465 aaKnown RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 PLA2G10O15496 165 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 HS6ST1O60243 411 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 TRIM13O60858 407 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 NBNO60934 754 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 KRT33AO76009 404 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 TM7SF2O76062 418 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 SUPT7LO94864 414 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 MT-ND3P03897 115 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 ITGAVP06756 1048 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 SERPINF2P08697 491 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 BMP2P12643 396 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 BMP3P12645 472 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 CHN1P15882 459 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 TNNI3P19429 210 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 EPHB2P29323 1055 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 CD40LGP29965 261 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 HMOX2P30519 316 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 S100A5P33763 92 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 SHMT2P34897 504 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 FRKP42685 505 aaPredicted RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 SERPINB4P48594 390 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 FMO5P49326 533 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 VCPP55072 806 aaKnown RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 OXCT1P55809 520 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 ACTR2P61160 394 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 RPL26P61254 145 aaKnown RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 PPARDQ03181 441 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms