RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 TRIM39Q9HCM9 518 aa8.95□□□□□ -0.98
NR1I3-230ENST00000511944 MRGBPQ9NV56 204 aa8.95□□□□□ -0.98
NR1I3-230ENST00000511944 FBXL12Q9NXK8 326 aa8.95□□□□□ -0.98
NR1I3-230ENST00000511944 USP36Q9P275 1121 aaKnown RBP8.95□□□□□ -0.98
NR1I3-230ENST00000511944 ITM2BQ9Y287 266 aa8.95□□□□□ -0.98
NR1I3-230ENST00000511944 STK38LQ9Y2H1 464 aa8.95□□□□□ -0.98
NR1I3-230ENST00000511944 FNDC3AQ9Y2H6 1198 aaKnown RBP8.95□□□□□ -0.98
NR1I3-230ENST00000511944 ARL2BPQ9Y2Y0 163 aa8.95□□□□□ -0.98
NR1I3-230ENST00000511944 TNPO3Q9Y5L0 923 aaKnown RBP8.95□□□□□ -0.98
NR1I3-230ENST00000511944 BRWD1Q9NSI6 2320 aa8.94□□□□□ -0.98
NR1I3-230ENST00000511944 A0A0U1RQS6 177 aa8.94□□□□□ -0.98
NR1I3-230ENST00000511944 A0A1W2PP55 124 aa8.94□□□□□ -0.98
NR1I3-230ENST00000511944 KANSL1LA0AUZ9 987 aa8.94□□□□□ -0.98
NR1I3-230ENST00000511944 LRRC72A6NJI9 287 aa8.94□□□□□ -0.98
NR1I3-230ENST00000511944 A8MT66 165 aa8.94□□□□□ -0.98
NR1I3-230ENST00000511944 LIN7AO14910 233 aaPredicted RBP8.94□□□□□ -0.98
NR1I3-230ENST00000511944 NARSO43776 548 aaKnown RBP8.94□□□□□ -0.98
NR1I3-230ENST00000511944 ZBTB14O43829 449 aa8.94□□□□□ -0.98
NR1I3-230ENST00000511944 DLX3O60479 287 aa8.94□□□□□ -0.98
NR1I3-230ENST00000511944 GPC4O75487 556 aa8.94□□□□□ -0.98
NR1I3-230ENST00000511944 RNASEH2AO75792 299 aaKnown RBP8.94□□□□□ -0.98
NR1I3-230ENST00000511944 SLCO2B1O94956 709 aa8.94□□□□□ -0.98
NR1I3-230ENST00000511944 C8GP07360 202 aa8.94□□□□□ -0.98
NR1I3-230ENST00000511944 CHRNB1P11230 501 aa8.94□□□□□ -0.98
NR1I3-230ENST00000511944 ALOX15P16050 662 aaPredicted RBP8.94□□□□□ -0.98
NR1I3-230ENST00000511944 IMPDH1P20839 514 aa8.94□□□□□ -0.98
NR1I3-230ENST00000511944 BGNP21810 368 aa8.94□□□□□ -0.98
NR1I3-230ENST00000511944 OXTRP30559 389 aa8.94□□□□□ -0.98
NR1I3-230ENST00000511944 GPR1P46091 355 aa8.94□□□□□ -0.98
NR1I3-230ENST00000511944 RPS9P46781 194 aaKnown RBP8.94□□□□□ -0.98
NR1I3-230ENST00000511944 ALDH18A1P54886 795 aaKnown RBP8.94□□□□□ -0.98
NR1I3-230ENST00000511944 ABCE1P61221 599 aaKnown RBP8.94□□□□□ -0.98
NR1I3-230ENST00000511944 HERVK_113P63132 956 aa8.94□□□□□ -0.98
NR1I3-230ENST00000511944 SNRPNP63162 240 aaKnown RBP8.94□□□□□ -0.98
NR1I3-230ENST00000511944 TMEM115Q12893 351 aaPredicted RBP8.94□□□□□ -0.98
NR1I3-230ENST00000511944 RPA4Q13156 261 aa8.94□□□□□ -0.98
NR1I3-230ENST00000511944 GTF2H3Q13889 308 aa8.94□□□□□ -0.98
NR1I3-230ENST00000511944 RCN2Q14257 317 aa8.94□□□□□ -0.98
NR1I3-230ENST00000511944 POM121L1PQ3SYA9 428 aa8.94□□□□□ -0.98
NR1I3-230ENST00000511944 RAET1GQ6H3X3 334 aa8.94□□□□□ -0.98
NR1I3-230ENST00000511944 PNCKQ6P2M8 343 aa8.94□□□□□ -0.98
NR1I3-230ENST00000511944 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.94□□□□□ -0.98
NR1I3-230ENST00000511944 YTHDF3Q7Z739 585 aaKnown RBP8.94□□□□□ -0.98
NR1I3-230ENST00000511944 RASGRP3Q8IV61 690 aa8.94□□□□□ -0.98
NR1I3-230ENST00000511944 WDR75Q8IWA0 830 aaKnown RBP8.94□□□□□ -0.98
NR1I3-230ENST00000511944 GBP7Q8N8V2 638 aaPredicted RBP8.94□□□□□ -0.98
NR1I3-230ENST00000511944 SIDT2Q8NBJ9 832 aaKnown RBP8.94□□□□□ -0.98
NR1I3-230ENST00000511944 FBXO15Q8NCQ5 510 aaPredicted RBP8.94□□□□□ -0.98
NR1I3-230ENST00000511944 OR2T34Q8NGX1 318 aa8.94□□□□□ -0.98
NR1I3-230ENST00000511944 GIMAP7Q8NHV1 300 aa8.94□□□□□ -0.98
NR1I3-230ENST00000511944 MAFAQ8NHW3 353 aaPredicted RBP8.94□□□□□ -0.98
NR1I3-230ENST00000511944 PIWIL2Q8TC59 973 aaKnown RBP8.94□□□□□ -0.98
NR1I3-230ENST00000511944 FUBP1Q96AE4 644 aaKnown RBP8.94□□□□□ -0.98
NR1I3-230ENST00000511944 LINGO1Q96FE5 620 aa8.94□□□□□ -0.98
NR1I3-230ENST00000511944 FAR2Q96K12 515 aa8.94□□□□□ -0.98
NR1I3-230ENST00000511944 MECRQ9BV79 373 aa8.94□□□□□ -0.98
NR1I3-230ENST00000511944 BOCQ9BWV1 1114 aa8.94□□□□□ -0.98
NR1I3-230ENST00000511944 ERVK-6Q9BXR3 956 aa8.94□□□□□ -0.98
NR1I3-230ENST00000511944 TEX101Q9BY14 249 aa8.94□□□□□ -0.98
NR1I3-230ENST00000511944 C12orf65Q9H3J6 166 aaKnown RBP8.94□□□□□ -0.98
NR1I3-230ENST00000511944 ALG9Q9H6U8 611 aa8.94□□□□□ -0.98
NR1I3-230ENST00000511944 ITM2CQ9NQX7 267 aa8.94□□□□□ -0.98
NR1I3-230ENST00000511944 KCNK4Q9NYG8 393 aa8.94□□□□□ -0.98
NR1I3-230ENST00000511944 NUDT4Q9NZJ9 180 aa8.94□□□□□ -0.98
NR1I3-230ENST00000511944 CNOT6Q9ULM6 557 aaKnown RBP8.94□□□□□ -0.98
NR1I3-230ENST00000511944 RAP2CQ9Y3L5 183 aa8.94□□□□□ -0.98
NR1I3-230ENST00000511944 OARD1Q9Y530 152 aa8.94□□□□□ -0.98
NR1I3-230ENST00000511944 BTN3A1O00481 513 aa8.93□□□□□ -0.98
NR1I3-230ENST00000511944 EBAG9O00559 213 aa8.93□□□□□ -0.98
NR1I3-230ENST00000511944 CHUKO15111 745 aa8.93□□□□□ -0.98
NR1I3-230ENST00000511944 GPR39O43194 453 aa8.93□□□□□ -0.98
NR1I3-230ENST00000511944 SGTAO43765 313 aa8.93□□□□□ -0.98
NR1I3-230ENST00000511944 ZNF217O75362 1048 aa8.93□□□□□ -0.98
NR1I3-230ENST00000511944 PCDH8O95206 1070 aa8.93□□□□□ -0.98
NR1I3-230ENST00000511944 F7P08709 466 aaPredicted RBP8.93□□□□□ -0.98
NR1I3-230ENST00000511944 MTHFD2P13995 350 aa8.93□□□□□ -0.98
NR1I3-230ENST00000511944 IL9P15248 144 aa8.93□□□□□ -0.98
NR1I3-230ENST00000511944 VCLP18206 1134 aa8.93□□□□□ -0.98
NR1I3-230ENST00000511944 WASP42768 502 aa8.93□□□□□ -0.98
NR1I3-230ENST00000511944 GLRBP48167 497 aa8.93□□□□□ -0.98
NR1I3-230ENST00000511944 SLC1A6P48664 564 aa8.93□□□□□ -0.98
NR1I3-230ENST00000511944 CCR5P51681 352 aa8.93□□□□□ -0.98
NR1I3-230ENST00000511944 AP1S2P56377 157 aa8.93□□□□□ -0.98
NR1I3-230ENST00000511944 CDC16Q13042 620 aa8.93□□□□□ -0.98
NR1I3-230ENST00000511944 PRKAA1Q13131 559 aa8.93□□□□□ -0.98
NR1I3-230ENST00000511944 SGCGQ13326 291 aa8.93□□□□□ -0.98
NR1I3-230ENST00000511944 PPP1R3AQ16821 1122 aa8.93□□□□□ -0.98
NR1I3-230ENST00000511944 WSCD2Q2TBF2 565 aa8.93□□□□□ -0.98
NR1I3-230ENST00000511944 ZNF658BQ4V348 819 aaPredicted RBP8.93□□□□□ -0.98
NR1I3-230ENST00000511944 XKR5Q6UX68 686 aa8.93□□□□□ -0.98
NR1I3-230ENST00000511944 RFLNAQ6ZTI6 216 aa8.93□□□□□ -0.98
NR1I3-230ENST00000511944 FRMD7Q6ZUT3 714 aa8.93□□□□□ -0.98
NR1I3-230ENST00000511944 FAM47EQ6ZV65 393 aa8.93□□□□□ -0.98
NR1I3-230ENST00000511944 CHSY3Q70JA7 882 aa8.93□□□□□ -0.98
NR1I3-230ENST00000511944 GPSM1Q86YR5 675 aa8.93□□□□□ -0.98
NR1I3-230ENST00000511944 CPNE9Q8IYJ1 553 aa8.93□□□□□ -0.98
NR1I3-230ENST00000511944 TCAIMQ8N3R3 496 aa8.93□□□□□ -0.98
NR1I3-230ENST00000511944 AFAP1L2Q8N4X5 818 aa8.93□□□□□ -0.98
NR1I3-230ENST00000511944 OXR1Q8N573 874 aa8.93□□□□□ -0.98
NR1I3-230ENST00000511944 CLDN19Q8N6F1 224 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms