RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 TEX28O15482 410 aa10.78□□□□□ -0.68
SEC31A-228ENST00000509142 SEC24DO94855 1032 aaPredicted RBP10.78□□□□□ -0.68
SEC31A-228ENST00000509142 PRR35P0CG20 571 aa10.78□□□□□ -0.68
SEC31A-228ENST00000509142 LAG3P18627 525 aa10.78□□□□□ -0.68
SEC31A-228ENST00000509142 SPAM1P38567 509 aa10.78□□□□□ -0.68
SEC31A-228ENST00000509142 GDF5P43026 501 aa10.78□□□□□ -0.68
SEC31A-228ENST00000509142 LMAN2Q12907 356 aa10.78□□□□□ -0.68
SEC31A-228ENST00000509142 ARHGEF7Q14155 803 aa10.78□□□□□ -0.68
SEC31A-228ENST00000509142 IRAK1BP1Q5VVH5 260 aa10.78□□□□□ -0.68
SEC31A-228ENST00000509142 GRAMD4Q6IC98 578 aa10.78□□□□□ -0.68
SEC31A-228ENST00000509142 ERI1Q8IV48 349 aaKnown RBP10.78□□□□□ -0.68
SEC31A-228ENST00000509142 TMEM199Q8N511 208 aa10.78□□□□□ -0.68
SEC31A-228ENST00000509142 ZBTB2Q8N680 514 aa10.78□□□□□ -0.68
SEC31A-228ENST00000509142 CCDC97Q96F63 343 aaPredicted RBP10.78□□□□□ -0.68
SEC31A-228ENST00000509142 PDLIM5Q96HC4 596 aaKnown RBP10.78□□□□□ -0.68
SEC31A-228ENST00000509142 ADI1Q9BV57 179 aa10.78□□□□□ -0.68
SEC31A-228ENST00000509142 HERC2P3Q9BVR0 1158 aa10.78□□□□□ -0.68
SEC31A-228ENST00000509142 NAA50Q9GZZ1 169 aaKnown RBP10.78□□□□□ -0.68
SEC31A-228ENST00000509142 ABCG8Q9H221 673 aa10.78□□□□□ -0.68
SEC31A-228ENST00000509142 BMP10O95393 424 aa10.78□□□□□ -0.68
SEC31A-228ENST00000509142 MYF6P23409 242 aa10.78□□□□□ -0.68
SEC31A-228ENST00000509142 ZXDBP98169 803 aa10.78□□□□□ -0.68
SEC31A-228ENST00000509142 MERTKQ12866 999 aa10.78□□□□□ -0.68
SEC31A-228ENST00000509142 PCBP2Q15366 365 aaKnown RBP eCLIP10.78□□□□□ -0.685e-11■■■□□ 15.4
SEC31A-228ENST00000509142 ATP6AP1Q15904 470 aa10.78□□□□□ -0.68
SEC31A-228ENST00000509142 ANKDD1AQ495B1 522 aa10.78□□□□□ -0.68
SEC31A-228ENST00000509142 INTS11Q5TA45 600 aaKnown RBP10.78□□□□□ -0.68
SEC31A-228ENST00000509142 LYPLAL1Q5VWZ2 237 aa10.78□□□□□ -0.68
SEC31A-228ENST00000509142 KLHL35Q6PF15 583 aa10.78□□□□□ -0.68
SEC31A-228ENST00000509142 SLC39A5Q6ZMH5 540 aa10.78□□□□□ -0.68
SEC31A-228ENST00000509142 ELMOD1Q8N336 334 aa10.78□□□□□ -0.68
SEC31A-228ENST00000509142 YME1L1Q96TA2 773 aa10.78□□□□□ -0.68
SEC31A-228ENST00000509142 CFHR5Q9BXR6 569 aa10.78□□□□□ -0.68
SEC31A-228ENST00000509142 POLR3HQ9Y535 204 aaPredicted RBP10.78□□□□□ -0.68
SEC31A-228ENST00000509142 PRSS21Q9Y6M0 314 aa10.78□□□□□ -0.68
SEC31A-228ENST00000509142 GBF1Q92538 1859 aa10.78□□□□□ -0.68
SEC31A-228ENST00000509142 EI24O14681 340 aa10.77□□□□□ -0.68
SEC31A-228ENST00000509142 ATE1O95260 518 aa10.77□□□□□ -0.68
SEC31A-228ENST00000509142 G6PDP11413 515 aa10.77□□□□□ -0.68
SEC31A-228ENST00000509142 BPIP17213 487 aa10.77□□□□□ -0.68
SEC31A-228ENST00000509142 CD247P20963 164 aa10.77□□□□□ -0.68
SEC31A-228ENST00000509142 POLR2IP36954 125 aaKnown RBP10.77□□□□□ -0.68
SEC31A-228ENST00000509142 SNRPD1P62314 119 aaKnown RBP10.77□□□□□ -0.68
SEC31A-228ENST00000509142 SBSNQ6UWP8 590 aa10.77□□□□□ -0.68
SEC31A-228ENST00000509142 Q6ZSR9 355 aa10.77□□□□□ -0.68
SEC31A-228ENST00000509142 SPRED1Q7Z699 444 aa10.77□□□□□ -0.68
SEC31A-228ENST00000509142 ZNF786Q8N393 782 aa10.77□□□□□ -0.68
SEC31A-228ENST00000509142 SFRP1Q8N474 314 aa10.77□□□□□ -0.68
SEC31A-228ENST00000509142 ADAMTS19Q8TE59 1207 aa10.77□□□□□ -0.68
SEC31A-228ENST00000509142 ISOC1Q96CN7 298 aa10.77□□□□□ -0.68
SEC31A-228ENST00000509142 ALG14Q96F25 216 aa10.77□□□□□ -0.68
SEC31A-228ENST00000509142 PPM1MQ96MI6 270 aa10.77□□□□□ -0.68
SEC31A-228ENST00000509142 SEPHS2Q99611 448 aa10.77□□□□□ -0.68
SEC31A-228ENST00000509142 INTS7Q9NVH2 962 aaKnown RBP10.77□□□□□ -0.68
SEC31A-228ENST00000509142 KLQ9UEF7 1012 aa10.77□□□□□ -0.68
SEC31A-228ENST00000509142 EIF3LQ9Y262 564 aaKnown RBP10.77□□□□□ -0.68
SEC31A-228ENST00000509142 TRAV19A0A0A6YYK7 116 aa10.77□□□□□ -0.69
SEC31A-228ENST00000509142 EEDO75530 441 aaKnown RBP10.77□□□□□ -0.69
SEC31A-228ENST00000509142 HRH2P25021 359 aa10.77□□□□□ -0.69
SEC31A-228ENST00000509142 YAP1P46937 504 aaKnown RBP10.77□□□□□ -0.69
SEC31A-228ENST00000509142 RPL38P63173 70 aaKnown RBP10.77□□□□□ -0.69
SEC31A-228ENST00000509142 TUBA4AP68366 448 aa10.77□□□□□ -0.69
SEC31A-228ENST00000509142 PMS2P3Q13401 168 aa10.77□□□□□ -0.69
SEC31A-228ENST00000509142 PLEKHG6Q3KR16 790 aa10.77□□□□□ -0.69
SEC31A-228ENST00000509142 SLC2A7Q6PXP3 512 aa10.77□□□□□ -0.69
SEC31A-228ENST00000509142 HS6ST3Q8IZP7 471 aa10.77□□□□□ -0.69
SEC31A-228ENST00000509142 OR2AP1Q8NGE2 309 aa10.77□□□□□ -0.69
SEC31A-228ENST00000509142 HM13Q8TCT9 377 aa10.77□□□□□ -0.69
SEC31A-228ENST00000509142 LKAAEAR1Q8TD35 194 aa10.77□□□□□ -0.69
SEC31A-228ENST00000509142 ADAMTS16Q8TE57 1224 aa10.77□□□□□ -0.69
SEC31A-228ENST00000509142 NPLQ9BXD5 320 aaPredicted RBP10.77□□□□□ -0.69
SEC31A-228ENST00000509142 BRINP2Q9C0B6 783 aa10.77□□□□□ -0.69
SEC31A-228ENST00000509142 RPF2Q9H7B2 306 aaKnown RBP10.77□□□□□ -0.69
SEC31A-228ENST00000509142 TIMMDC1Q9NPL8 285 aa10.77□□□□□ -0.69
SEC31A-228ENST00000509142 CLEC4EQ9ULY5 219 aa10.77□□□□□ -0.69
SEC31A-228ENST00000509142 SLC8A2Q9UPR5 921 aa10.77□□□□□ -0.69
SEC31A-228ENST00000509142 ZNF510Q9Y2H8 683 aa10.77□□□□□ -0.69
SEC31A-228ENST00000509142 NEUROG3Q9Y4Z2 214 aa10.77□□□□□ -0.69
SEC31A-228ENST00000509142 A0A1W2PRU2 124 aa10.77□□□□□ -0.69
SEC31A-228ENST00000509142 KANSL1LA0AUZ9 987 aa10.77□□□□□ -0.69
SEC31A-228ENST00000509142 SOCS5O75159 536 aa10.77□□□□□ -0.69
SEC31A-228ENST00000509142 EFEMP2O95967 443 aa10.77□□□□□ -0.69
SEC31A-228ENST00000509142 ACRV1P26436 265 aa10.77□□□□□ -0.69
SEC31A-228ENST00000509142 CD70P32970 193 aa10.77□□□□□ -0.69
SEC31A-228ENST00000509142 ENTPD1P49961 510 aa10.77□□□□□ -0.69
SEC31A-228ENST00000509142 CYBRD1Q53TN4 286 aa10.77□□□□□ -0.69
SEC31A-228ENST00000509142 NANOGP8Q6NSW7 305 aa10.77□□□□□ -0.69
SEC31A-228ENST00000509142 CYP20A1Q6UW02 462 aa10.77□□□□□ -0.69
SEC31A-228ENST00000509142 METTL3Q86U44 580 aaKnown RBP10.77□□□□□ -0.69
SEC31A-228ENST00000509142 RALGPS2Q86X27 583 aaPredicted RBP10.77□□□□□ -0.69
SEC31A-228ENST00000509142 PROKR1Q8TCW9 393 aa10.77□□□□□ -0.69
SEC31A-228ENST00000509142 C12orf43Q96C57 262 aaKnown RBP10.77□□□□□ -0.69
SEC31A-228ENST00000509142 PPP3R2Q96LZ3 170 aa10.77□□□□□ -0.69
SEC31A-228ENST00000509142 HAUS8Q9BT25 410 aa10.77□□□□□ -0.69
SEC31A-228ENST00000509142 NANOGQ9H9S0 305 aa10.77□□□□□ -0.69
SEC31A-228ENST00000509142 LTB4R2Q9NPC1 389 aa10.77□□□□□ -0.69
SEC31A-228ENST00000509142 ANAPC2Q9UJX6 822 aa10.77□□□□□ -0.69
SEC31A-228ENST00000509142 B4GAT1O43505 415 aa10.76□□□□□ -0.69
SEC31A-228ENST00000509142 RGS14O43566 566 aa10.76□□□□□ -0.69
SEC31A-228ENST00000509142 RPS3P23396 243 aaKnown RBP eCLIP10.76□□□□□ -0.692e-7■□□□□ 11.2
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms