RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 GUSBP11Q6P575 273 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 TMCO3Q6UWJ1 677 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 SRLQ86TD4 932 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 TAX1BP1Q86VP1 789 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 UNC5BQ8IZJ1 945 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 WDTC1Q8N5D0 677 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 ATPAF2Q8N5M1 289 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 RTL3Q8N8U3 475 aaKnown RBP3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 C3orf20Q8ND61 904 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 C1orf162Q8NEQ5 155 aaPredicted RBP3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 SLC30A5Q8TAD4 765 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 PPP1R14CQ8TAE6 165 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 GPT2Q8TD30 523 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 CFHR4Q92496 578 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 TSACCQ96A04 125 aaPredicted RBP3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 NTAN1Q96AB6 310 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 SH3KBP1Q96B97 665 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 NUS1Q96E22 293 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 SGF29Q96ES7 293 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 MYEOVQ96EZ4 313 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 LMLNQ96KR4 655 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 TTC25Q96NG3 672 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 SLC46A1Q96NT5 459 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 AGPAT1Q99943 283 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 APOOQ9BUR5 198 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 MAK16Q9BXY0 300 aaKnown RBP3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 SLC6A15Q9H2J7 730 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 LRRN3Q9H3W5 708 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 DEF6Q9H4E7 631 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 PRORYQ9H606 182 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 CLMPQ9H6B4 373 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 SEC61A2Q9H9S3 476 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 EBF2Q9HAK2 575 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 ZNHIT6Q9NWK9 470 aaKnown RBP3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 ING3Q9NXR8 418 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 PPP4R1LQ9P1A2 415 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 LRIT1Q9P2V4 623 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 MYO1AQ9UBC5 1043 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 DKK3Q9UBP4 350 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 PCSK1NQ9UHG2 260 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 LCMT1Q9UIC8 334 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 ITM2BQ9Y287 266 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 LOXL2Q9Y4K0 774 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 OR1A2Q9Y585 309 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 RAI2Q9Y5P3 530 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 GPR45Q9Y5Y3 372 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 CKAP5Q14008 2032 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 DCHS1Q96JQ0 3298 aa3.75□□□□□ -1.81
HMGN1P11-201ENST00000508668 URB1O60287 2271 aaKnown RBP3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 GOLGA4Q13439 2230 aaKnown RBP3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 A0A1W2PRX2 142 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 CFAP69A5D8W1 941 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 A8MX80 341 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 D6RAR5 112 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 CCP110O43303 1012 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 TLX3O43711 291 aaPredicted RBP3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 NUDT21O43809 227 aaKnown RBP3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 DUX1O43812 170 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 TMEM127O75204 238 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 MTA2O94776 668 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 PIGNO95427 931 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 PRB1P04280 392 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 MYF5P13349 255 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 AMD1P17707 334 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 TGM2P21980 687 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 CCND1P24385 295 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 SLC5A2P31639 672 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 CDH5P33151 784 aaPredicted RBP3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 RFC1P35251 1148 aaPredicted RBP3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 UGT1A5P35504 534 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 KIR2DL3P43628 341 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 MMP13P45452 471 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 GNPDA1P46926 289 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 MTNR1BP49286 362 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 PAPOLAP51003 745 aaKnown RBP3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 METAP1P53582 386 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 CDH6P55285 790 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 PFN3P60673 137 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 NOMO3P69849 1222 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 CCL7P80098 99 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 PDE1BQ01064 536 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 APBA1Q02410 837 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 PLP2Q04941 152 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 IL10RBQ08334 325 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 NSUN2Q08J23 767 aaKnown RBP eCLIP3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 KLHL30Q0D2K2 578 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 DNAH14Q0VDD8 3507 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 ACACAQ13085 2346 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 RIN1Q13671 783 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 GTF2H3Q13889 308 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 LY6DQ14210 128 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 KRT33BQ14525 404 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 IRF4Q15306 451 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 PCBP2Q15366 365 aaKnown RBP eCLIP3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 CCDC14Q49A88 953 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 TMEM52BQ4KMG9 183 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 C14orf28Q4W4Y0 310 aa3.74□□□□□ -1.81
HMGN1P11-201ENST00000508668 BOLA3Q53S33 107 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms