RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 OR2A25A4D2G3 310 aa16.83■□□□□ 0.28
SQSTM1-211ENST00000506690 IFRD1O00458 451 aaPredicted RBP16.83■□□□□ 0.28
SQSTM1-211ENST00000506690 RGS10O43665 173 aa16.83■□□□□ 0.28
SQSTM1-211ENST00000506690 MITFO75030 526 aaPredicted RBP16.83■□□□□ 0.28
SQSTM1-211ENST00000506690 USP2O75604 605 aaPredicted RBP16.83■□□□□ 0.28
SQSTM1-211ENST00000506690 KRT8P05787 483 aa16.83■□□□□ 0.28
SQSTM1-211ENST00000506690 SLC2A3P11169 496 aa16.83■□□□□ 0.28
SQSTM1-211ENST00000506690 CYP2C18P33260 490 aa16.83■□□□□ 0.28
SQSTM1-211ENST00000506690 SCNN1GP51170 649 aa16.83■□□□□ 0.28
SQSTM1-211ENST00000506690 HUNKP57058 714 aa16.83■□□□□ 0.28
SQSTM1-211ENST00000506690 ZNF45Q02386 682 aa16.83■□□□□ 0.28
SQSTM1-211ENST00000506690 TRAF3Q13114 568 aa16.83■□□□□ 0.28
SQSTM1-211ENST00000506690 UBE2UQ5VVX9 321 aa16.83■□□□□ 0.28
SQSTM1-211ENST00000506690 PPP2R2DQ66LE6 453 aa16.83■□□□□ 0.28
SQSTM1-211ENST00000506690 GDPD3Q7L5L3 318 aa16.83■□□□□ 0.28
SQSTM1-211ENST00000506690 CCDC103Q8IW40 242 aa16.83■□□□□ 0.28
SQSTM1-211ENST00000506690 OR6F1Q8NGZ6 308 aa16.83■□□□□ 0.28
SQSTM1-211ENST00000506690 RNF34Q969K3 372 aa16.83■□□□□ 0.28
SQSTM1-211ENST00000506690 IMP4Q96G21 291 aaKnown RBP16.83■□□□□ 0.28
SQSTM1-211ENST00000506690 CDK5RAP1Q96SZ6 601 aaKnown RBP16.83■□□□□ 0.28
SQSTM1-211ENST00000506690 RNF38Q9H0F5 515 aa16.83■□□□□ 0.28
SQSTM1-211ENST00000506690 ZBTB20Q9HC78 741 aaPredicted RBP16.83■□□□□ 0.28
SQSTM1-211ENST00000506690 CRTAC1Q9NQ79 661 aa16.83■□□□□ 0.28
SQSTM1-211ENST00000506690 PDGFCQ9NRA1 345 aa16.83■□□□□ 0.28
SQSTM1-211ENST00000506690 IKZF3Q9UKT9 509 aa16.83■□□□□ 0.28
SQSTM1-211ENST00000506690 RNF112Q9ULX5 631 aa16.83■□□□□ 0.28
SQSTM1-211ENST00000506690 PPP2R3BQ9Y5P8 575 aa16.83■□□□□ 0.28
SQSTM1-211ENST00000506690 COL4A4P53420 1690 aaPredicted RBP16.83■□□□□ 0.28
SQSTM1-211ENST00000506690 HAT1O14929 419 aa16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 ANKRD28O15084 1053 aa16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 DFNA5O60443 496 aa16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 ECI2O75521 394 aa16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 CHRNB1P11230 501 aa16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 DGKQP52824 942 aa16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 KRR1Q13601 381 aaKnown RBP16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 KEAP1Q14145 624 aa16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 HABP4Q5JVS0 413 aaKnown RBP16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 ARTNQ5T4W7 220 aa16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 NXF2Q9GZY0 626 aaKnown RBP16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 MAGIXQ9H6Y5 334 aa16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 CCNB1IP1Q9NPC3 277 aa16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 DKK3Q9UBP4 350 aa16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 PCTPQ9UKL6 214 aa16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 ERVW-1Q9UQF0 538 aa16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 KCTD3Q9Y597 815 aa16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 FGF10O15520 208 aaPredicted RBP16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 LDB2O43679 373 aa16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 SCELO95171 688 aa16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 MLYCDO95822 493 aa16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 MZF1P28698 734 aaPredicted RBP16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 GTF2E2P29084 291 aaKnown RBP16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 CLK3P49761 638 aaKnown RBP16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 PRKCDQ05655 676 aa16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 AFMIDQ63HM1 303 aa16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 WSCD1Q658N2 575 aa16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 CYP4Z1Q86W10 505 aa16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 ZNF540Q8NDQ6 660 aa16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 OR10A6Q8NH74 314 aa16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 NUDT8Q8WV74 236 aa16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 PYCR2Q96C36 320 aa16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 PDLIM5Q96HC4 596 aaKnown RBP16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 TBATAQ96M53 351 aa16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 SIGLEC11Q96RL6 698 aa16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 DERL2Q9GZP9 239 aa16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 MIR1-1HGQ9H1L0 117 aa16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 KLK14Q9P0G3 267 aa16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 ZNF221Q9UK13 617 aa16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 PKP3Q9Y446 797 aa16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 U3KQV3 271 aa16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 ANKRD36A6QL64 1941 aa16.82■□□□□ 0.28
SQSTM1-211ENST00000506690 HHLA1C9JL84 531 aa16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 CXCR6O00574 342 aa16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 STX16O14662 325 aa16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 G6PDP11413 515 aa16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 IGFBP5P24593 272 aa16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 GGT5P36269 586 aa16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 AGTR2P50052 363 aa16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 CHRNEQ04844 493 aa16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 SEMA3AQ14563 771 aa16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 PON2Q15165 354 aa16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 PLA2G4EQ3MJ16 856 aa16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 MANEALQ5VSG8 457 aa16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 PARP16Q8N5Y8 322 aa16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 GPR150Q8NGU9 434 aa16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 FAM162AQ96A26 154 aa16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 IKZF5Q9H5V7 419 aa16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 DCAF13Q9NV06 445 aaKnown RBP16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 ELOVL7A1L3X0 281 aa16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 KMOO15229 486 aa16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 KLK8O60259 260 aa16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 PEX11BO96011 259 aa16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 LCKP06239 509 aa16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 RETP07949 1114 aa16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 MSH3P20585 1137 aa16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 MAGP20916 626 aa16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 HOXD11P31277 338 aaPredicted RBP16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 ACVR1Q04771 509 aa16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 ARHGAP1Q07960 439 aa16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 IHHQ14623 411 aa16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 TTLL4Q14679 1199 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms