RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 TCF12Q99081 682 aa17.81■□□□□ 0.44
PDLIM7-216ENST00000506537 CARD6Q9BX69 1037 aa17.81■□□□□ 0.44
PDLIM7-216ENST00000506537 C20orf96Q9NUD7 363 aaPredicted RBP17.81■□□□□ 0.44
PDLIM7-216ENST00000506537 WHRNQ9P202 907 aa17.81■□□□□ 0.44
PDLIM7-216ENST00000506537 DKK4Q9UBT3 224 aa17.81■□□□□ 0.44
PDLIM7-216ENST00000506537 CHMP2BQ9UQN3 213 aa17.81■□□□□ 0.44
PDLIM7-216ENST00000506537 CDYLQ9Y232 598 aa17.81■□□□□ 0.44
PDLIM7-216ENST00000506537 TEX264Q9Y6I9 313 aa17.81■□□□□ 0.44
PDLIM7-216ENST00000506537 CACNA1GO43497 2377 aa17.8■□□□□ 0.44
PDLIM7-216ENST00000506537 CELSR3Q9NYQ7 3312 aa17.8■□□□□ 0.44
PDLIM7-216ENST00000506537 BHMG1C9JSJ3 638 aaPredicted RBP17.8■□□□□ 0.44
PDLIM7-216ENST00000506537 AGRPO00253 132 aa17.8■□□□□ 0.44
PDLIM7-216ENST00000506537 UBXN7O94888 489 aa17.8■□□□□ 0.44
PDLIM7-216ENST00000506537 S1PR4O95977 384 aa17.8■□□□□ 0.44
PDLIM7-216ENST00000506537 TUBB4AP04350 444 aa17.8■□□□□ 0.44
PDLIM7-216ENST00000506537 CSE1LP55060 971 aaKnown RBP17.8■□□□□ 0.44
PDLIM7-216ENST00000506537 GFERP55789 205 aa17.8■□□□□ 0.44
PDLIM7-216ENST00000506537 CTBP1Q13363 440 aa17.8■□□□□ 0.44
PDLIM7-216ENST00000506537 THOC5Q13769 683 aaKnown RBP17.8■□□□□ 0.44
PDLIM7-216ENST00000506537 C16orf72Q14CZ0 275 aa17.8■□□□□ 0.44
PDLIM7-216ENST00000506537 FASTKD3Q14CZ7 662 aaKnown RBP17.8■□□□□ 0.44
PDLIM7-216ENST00000506537 SPANXN3Q5MJ09 141 aa17.8■□□□□ 0.44
PDLIM7-216ENST00000506537 RNF187Q5TA31 235 aaPredicted RBP17.8■□□□□ 0.44
PDLIM7-216ENST00000506537 PTRHD1Q6GMV3 140 aaKnown RBP17.8■□□□□ 0.44
PDLIM7-216ENST00000506537 TMEM71Q6P5X7 295 aa17.8■□□□□ 0.44
PDLIM7-216ENST00000506537 WDR74Q6RFH5 385 aaPredicted RBP17.8■□□□□ 0.44
PDLIM7-216ENST00000506537 LRRC6Q86X45 466 aa17.8■□□□□ 0.44
PDLIM7-216ENST00000506537 VRK3Q8IV63 474 aa17.8■□□□□ 0.44
PDLIM7-216ENST00000506537 ZCCHC14Q8WYQ9 949 aaKnown RBP17.8■□□□□ 0.44
PDLIM7-216ENST00000506537 NCSTNQ92542 709 aa17.8■□□□□ 0.44
PDLIM7-216ENST00000506537 EPB41L1Q9H4G0 881 aa17.8■□□□□ 0.44
PDLIM7-216ENST00000506537 CCDC86Q9H6F5 360 aaKnown RBP17.8■□□□□ 0.44
PDLIM7-216ENST00000506537 POLR1BQ9H9Y6 1135 aa17.8■□□□□ 0.44
PDLIM7-216ENST00000506537 FBXO6Q9NRD1 293 aaPredicted RBP17.8■□□□□ 0.44
PDLIM7-216ENST00000506537 PDP2Q9P2J9 529 aa17.8■□□□□ 0.44
PDLIM7-216ENST00000506537 GNPTGQ9UJJ9 305 aa17.8■□□□□ 0.44
PDLIM7-216ENST00000506537 CRYL1Q9Y2S2 319 aa17.8■□□□□ 0.44
PDLIM7-216ENST00000506537 AK5Q9Y6K8 562 aa17.8■□□□□ 0.44
PDLIM7-216ENST00000506537 APC2O95996 2303 aa17.8■□□□□ 0.44
PDLIM7-216ENST00000506537 MN1Q10571 1320 aaPredicted RBP17.79■□□□□ 0.44
PDLIM7-216ENST00000506537 TMEM8BA6NDV4 472 aa17.79■□□□□ 0.44
PDLIM7-216ENST00000506537 E7ESA3 106 aa17.79■□□□□ 0.44
PDLIM7-216ENST00000506537 TMX2-CTNND1H3BSU7 103 aa17.79■□□□□ 0.44
PDLIM7-216ENST00000506537 TAF4O00268 1085 aa17.79■□□□□ 0.44
PDLIM7-216ENST00000506537 TTC4O95801 387 aa17.79■□□□□ 0.44
PDLIM7-216ENST00000506537 HGFP14210 728 aa17.79■□□□□ 0.44
PDLIM7-216ENST00000506537 AOAHP28039 575 aa17.79■□□□□ 0.44
PDLIM7-216ENST00000506537 ACADLP28330 430 aa17.79■□□□□ 0.44
PDLIM7-216ENST00000506537 FMO4P31512 558 aa17.79■□□□□ 0.44
PDLIM7-216ENST00000506537 CAPZBP47756 277 aa17.79■□□□□ 0.44
PDLIM7-216ENST00000506537 LSSP48449 732 aa17.79■□□□□ 0.44
PDLIM7-216ENST00000506537 CD151P48509 253 aa17.79■□□□□ 0.44
PDLIM7-216ENST00000506537 PPM1FP49593 454 aaPredicted RBP17.79■□□□□ 0.44
PDLIM7-216ENST00000506537 ADARP55265 1226 aaKnown RBP17.79■□□□□ 0.44
PDLIM7-216ENST00000506537 MPP1Q00013 466 aa17.79■□□□□ 0.44
PDLIM7-216ENST00000506537 TRADDQ15628 312 aa17.79■□□□□ 0.44
PDLIM7-216ENST00000506537 SYTL3Q4VX76 610 aa17.79■□□□□ 0.44
PDLIM7-216ENST00000506537 HSP90AA5PQ58FG0 334 aa17.79■□□□□ 0.44
PDLIM7-216ENST00000506537 STEAP4Q687X5 459 aa17.79■□□□□ 0.44
PDLIM7-216ENST00000506537 UNC5AQ6ZN44 842 aa17.79■□□□□ 0.44
PDLIM7-216ENST00000506537 RAB11FIP2Q7L804 512 aa17.79■□□□□ 0.44
PDLIM7-216ENST00000506537 KCNMB4Q86W47 210 aa17.79■□□□□ 0.44
PDLIM7-216ENST00000506537 ANKMY2Q8IV38 441 aa17.79■□□□□ 0.44
PDLIM7-216ENST00000506537 WDR36Q8NI36 951 aaKnown RBP17.79■□□□□ 0.44
PDLIM7-216ENST00000506537 LRRC39Q96DD0 335 aa17.79■□□□□ 0.44
PDLIM7-216ENST00000506537 CFAP36Q96G28 342 aa17.79■□□□□ 0.44
PDLIM7-216ENST00000506537 NRTNQ99748 197 aa17.79■□□□□ 0.44
PDLIM7-216ENST00000506537 DPYSL5Q9BPU6 564 aa17.79■□□□□ 0.44
PDLIM7-216ENST00000506537 NAT9Q9BTE0 207 aa17.79■□□□□ 0.44
PDLIM7-216ENST00000506537 STRADBQ9C0K7 418 aa17.79■□□□□ 0.44
PDLIM7-216ENST00000506537 ZMYND15Q9H091 742 aa17.79■□□□□ 0.44
PDLIM7-216ENST00000506537 KIR3DX1Q9H7L2 352 aa17.79■□□□□ 0.44
PDLIM7-216ENST00000506537 INTS10Q9NVR2 710 aaKnown RBP17.79■□□□□ 0.44
PDLIM7-216ENST00000506537 ZC3H7BQ9UGR2 993 aaKnown RBP17.79■□□□□ 0.44
PDLIM7-216ENST00000506537 SLC24A2Q9UI40 661 aa17.79■□□□□ 0.44
PDLIM7-216ENST00000506537 LOXL2Q9Y4K0 774 aa17.79■□□□□ 0.44
PDLIM7-216ENST00000506537 LAMA5O15230 3695 aa17.79■□□□□ 0.44
PDLIM7-216ENST00000506537 ZFHX4Q86UP3 3567 aa17.79■□□□□ 0.44
PDLIM7-216ENST00000506537 F8W8V4 182 aa17.78■□□□□ 0.44
PDLIM7-216ENST00000506537 IFRD1O00458 451 aaPredicted RBP17.78■□□□□ 0.44
PDLIM7-216ENST00000506537 NIPSNAP2O75323 286 aa17.78■□□□□ 0.44
PDLIM7-216ENST00000506537 GPC4O75487 556 aa17.78■□□□□ 0.44
PDLIM7-216ENST00000506537 ERVK-10P10266 1014 aa17.78■□□□□ 0.44
PDLIM7-216ENST00000506537 PPP1CAP62136 330 aa17.78■□□□□ 0.44
PDLIM7-216ENST00000506537 PDIA2Q13087 525 aaKnown RBP17.78■□□□□ 0.44
PDLIM7-216ENST00000506537 CBLBQ13191 982 aa17.78■□□□□ 0.44
PDLIM7-216ENST00000506537 FOXR1Q6PIV2 292 aa17.78■□□□□ 0.44
PDLIM7-216ENST00000506537 SLC22A15Q8IZD6 547 aa17.78■□□□□ 0.44
PDLIM7-216ENST00000506537 BBOF1Q8ND07 529 aa17.78■□□□□ 0.44
PDLIM7-216ENST00000506537 PHC3Q8NDX5 983 aa17.78■□□□□ 0.44
PDLIM7-216ENST00000506537 TFGQ92734 400 aaPredicted RBP17.78■□□□□ 0.44
PDLIM7-216ENST00000506537 FAM167BQ9BTA0 163 aa17.78■□□□□ 0.44
PDLIM7-216ENST00000506537 LRRC1Q9BTT6 524 aa17.78■□□□□ 0.44
PDLIM7-216ENST00000506537 TSSK1BQ9BXA7 367 aa17.78■□□□□ 0.44
PDLIM7-216ENST00000506537 ASCL3Q9NQ33 180 aa17.78■□□□□ 0.44
PDLIM7-216ENST00000506537 IARS2Q9NSE4 1012 aaKnown RBP17.78■□□□□ 0.44
PDLIM7-216ENST00000506537 SLC17A6Q9P2U8 582 aa17.78■□□□□ 0.44
PDLIM7-216ENST00000506537 FBXO5Q9UKT4 447 aa17.78■□□□□ 0.44
PDLIM7-216ENST00000506537 UTP11Q9Y3A2 253 aaKnown RBP17.78■□□□□ 0.44
PDLIM7-216ENST00000506537 PCDHGA8Q9Y5G5 932 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms