RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 MAPK9P45984 424 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 MTIF2P46199 727 aaKnown RBP1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 HAAOP46952 286 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 SULT1E1P49888 294 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 SERPINB8P50452 374 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 ALDH3A2P51648 485 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 PLTPP55058 493 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 VCPP55072 806 aaKnown RBP1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 LINC01547P58512 204 aaPredicted RBP1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 BRWD1-AS2P59051 145 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 HAND2P61296 217 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 UBE2IP63279 158 aaKnown RBP1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 RPP38P78345 283 aaKnown RBP1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 MRPS25P82663 173 aaKnown RBP1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 COG7P83436 770 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 PDE1BQ01064 536 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 NIPAL4Q0D2K0 466 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 BNIP1Q12981 228 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 MSLNQ13421 630 aaPredicted RBP1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 RUNX2Q13950 521 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 FRG1Q14331 258 aaKnown RBP1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 EFNB3Q15768 340 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 SMAD1Q15797 465 aaKnown RBP1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 WSCD2Q2TBF2 565 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 SLC39A12Q504Y0 691 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 FBXO48Q5FWF7 155 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 ZC2HC1BQ5TFG8 222 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 ZNF658Q5TYW1 1059 aaPredicted RBP1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 SULT6B1Q6IMI4 303 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 ARHGAP11AQ6P4F7 1023 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 WDR73Q6P4I2 378 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 C6orf89Q6UWU4 347 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 IL20RBQ6UXL0 311 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 B3GNT6Q6ZMB0 384 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 ZNF600Q6ZNG1 722 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 C15orf52Q6ZUT6 534 aaKnown RBP1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 ZER1Q7Z7L7 766 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 ADCK1Q86TW2 530 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 COMTD1Q86VU5 262 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 UNC45BQ8IWX7 931 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 CNTROBQ8N137 903 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 ATG16L2Q8NAA4 619 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 SLC4A11Q8NBS3 891 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 ZNF540Q8NDQ6 660 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 ZNF248Q8NDW4 579 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 CCDC112Q8NEF3 446 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 CADM4Q8NFZ8 388 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 OR6C4Q8NGE1 309 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 OR6Y1Q8NGX8 325 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 IFT81Q8WYA0 676 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 IRGQQ8WZA9 623 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 SHC3Q92529 594 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 ZNF653Q96CK0 615 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 VPS39Q96JC1 886 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 CNDP1Q96KN2 507 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 RPGRIP1Q96KN7 1286 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 ATP6V1G3Q96LB4 118 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 CDRT15Q96T59 188 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 MPHOSPH8Q99549 860 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 HNRNPABQ99729 332 aaKnown RBP1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 TSG101Q99816 390 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 KXD1Q9BQD3 176 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 GPATCH1Q9BRR8 931 aaKnown RBP1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 RIOK1Q9BRS2 568 aaKnown RBP1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 FAM129AQ9BZQ8 928 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 API5Q9BZZ5 524 aaKnown RBP1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 WDR12Q9GZL7 423 aaKnown RBP1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 CTDSP1Q9GZU7 261 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 WNT5BQ9H1J7 359 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 XKR8Q9H6D3 395 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 TTC12Q9H892 705 aaPredicted RBP1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 XAB2Q9HCS7 855 aaKnown RBP1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 G6PC2Q9NQR9 355 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 IARS2Q9NSE4 1012 aaKnown RBP1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 ANKEF1Q9NU02 776 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 BLOC1S4Q9NUP1 217 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 FAM118AQ9NWS6 357 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 ZNF446Q9NWS9 450 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 CRNNQ9UBG3 495 aaPredicted RBP1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 CD300AQ9UGN4 299 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 AMACRQ9UHK6 382 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 CFL2Q9Y281 166 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 TMEM5Q9Y2B1 443 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 EXOC6BQ9Y2D4 811 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 SH3GLB1Q9Y371 365 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 PCDHGB5Q9Y5G0 923 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 ABCC9O60706 1549 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 FHAD1B1AJZ9 1412 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 CNTLNQ9NXG0 1405 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 SBNO1A3KN83 1393 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 KIF15Q9NS87 1388 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 VIRMAQ69YN4 1812 aaKnown RBP1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 PTPRCP08575 1304 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 TTC21BQ7Z4L5 1316 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 GOLGA8QA0A0J9YX86 632 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 GOLGA6L7A0A1B0GV03 622 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 CTAGE9A4FU28 777 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 GOLGA8OA6NCC3 632 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 OR5K4A6NMS3 321 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 PMS2P5A8MQ11 134 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms