RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 DMPKQ09013 629 aa12.1□□□□□ -0.47
LSM6-204ENST00000504181 CA9Q16790 459 aa12.1□□□□□ -0.47
LSM6-204ENST00000504181 KHDC1Q4VXA5 237 aaKnown RBP12.1□□□□□ -0.47
LSM6-204ENST00000504181 RALGPS1Q5JS13 557 aa12.1□□□□□ -0.47
LSM6-204ENST00000504181 KIRREL2Q6UWL6 708 aa12.1□□□□□ -0.47
LSM6-204ENST00000504181 C3P1Q6ZMU1 363 aa12.1□□□□□ -0.47
LSM6-204ENST00000504181 Q6ZPB1 254 aaPredicted RBP12.1□□□□□ -0.47
LSM6-204ENST00000504181 C11orf96Q7Z7L8 435 aa12.1□□□□□ -0.47
LSM6-204ENST00000504181 NOP9Q86U38 636 aaKnown RBP12.1□□□□□ -0.47
LSM6-204ENST00000504181 SPPL2CQ8IUH8 684 aa12.1□□□□□ -0.47
LSM6-204ENST00000504181 TRAPPC5Q8IUR0 188 aa12.1□□□□□ -0.47
LSM6-204ENST00000504181 DMRTC2Q8IXT2 367 aaPredicted RBP12.1□□□□□ -0.47
LSM6-204ENST00000504181 BBS5Q8N3I7 341 aa12.1□□□□□ -0.47
LSM6-204ENST00000504181 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.1□□□□□ -0.47
LSM6-204ENST00000504181 SELENOOQ9BVL4 669 aa12.1□□□□□ -0.47
LSM6-204ENST00000504181 AP1M1Q9BXS5 423 aa12.1□□□□□ -0.47
LSM6-204ENST00000504181 AP4E1Q9UPM8 1137 aa12.1□□□□□ -0.47
LSM6-204ENST00000504181 CTNND2Q9UQB3 1225 aa12.1□□□□□ -0.47
LSM6-204ENST00000504181 CHKBQ9Y259 395 aa12.1□□□□□ -0.47
LSM6-204ENST00000504181 LUC7L2Q9Y383 392 aaKnown RBP12.1□□□□□ -0.47
LSM6-204ENST00000504181 HS3ST3B1Q9Y662 390 aa12.1□□□□□ -0.47
LSM6-204ENST00000504181 NKX2-6A6NCS4 301 aa12.09□□□□□ -0.47
LSM6-204ENST00000504181 ZNHIT1O43257 154 aa12.09□□□□□ -0.47
LSM6-204ENST00000504181 PROM1O43490 865 aa12.09□□□□□ -0.47
LSM6-204ENST00000504181 PMPCBO75439 489 aa12.09□□□□□ -0.47
LSM6-204ENST00000504181 CDK14O94921 469 aa12.09□□□□□ -0.47
LSM6-204ENST00000504181 LY6G6DO95868 133 aa12.09□□□□□ -0.47
LSM6-204ENST00000504181 MTHFD1P11586 935 aaKnown RBP12.09□□□□□ -0.47
LSM6-204ENST00000504181 PVRP15151 417 aa12.09□□□□□ -0.47
LSM6-204ENST00000504181 MMP8P22894 467 aa12.09□□□□□ -0.47
LSM6-204ENST00000504181 MMP13P45452 471 aa12.09□□□□□ -0.47
LSM6-204ENST00000504181 AIF1P55008 147 aa12.09□□□□□ -0.47
LSM6-204ENST00000504181 ITKQ08881 620 aa12.09□□□□□ -0.47
LSM6-204ENST00000504181 PRKAA1Q13131 559 aa12.09□□□□□ -0.47
LSM6-204ENST00000504181 XRCC4Q13426 336 aa12.09□□□□□ -0.47
LSM6-204ENST00000504181 NKAIN1Q4KMZ8 207 aa12.09□□□□□ -0.47
LSM6-204ENST00000504181 RHBDD2Q6NTF9 364 aa12.09□□□□□ -0.47
LSM6-204ENST00000504181 CDHR3Q6ZTQ4 885 aa12.09□□□□□ -0.47
LSM6-204ENST00000504181 RFX8Q6ZV50 586 aa12.09□□□□□ -0.47
LSM6-204ENST00000504181 FAM20CQ8IXL6 584 aa12.09□□□□□ -0.47
LSM6-204ENST00000504181 RAVER1Q8IY67 606 aaKnown RBP12.09□□□□□ -0.47
LSM6-204ENST00000504181 LPCAT1Q8NF37 534 aa12.09□□□□□ -0.47
LSM6-204ENST00000504181 SLC30A5Q8TAD4 765 aa12.09□□□□□ -0.47
LSM6-204ENST00000504181 AGAP11Q8TF27 550 aa12.09□□□□□ -0.47
LSM6-204ENST00000504181 ZFPM2Q8WW38 1151 aa12.09□□□□□ -0.47
LSM6-204ENST00000504181 NELFBQ8WX92 580 aa12.09□□□□□ -0.47
LSM6-204ENST00000504181 N4BP2L2Q92802 583 aaPredicted RBP12.09□□□□□ -0.47
LSM6-204ENST00000504181 GLYATL1Q969I3 302 aa12.09□□□□□ -0.47
LSM6-204ENST00000504181 CCDC34Q96HJ3 373 aa12.09□□□□□ -0.47
LSM6-204ENST00000504181 DHX35Q9H5Z1 703 aaKnown RBP12.09□□□□□ -0.47
LSM6-204ENST00000504181 NT5MQ9NPB1 228 aa12.09□□□□□ -0.47
LSM6-204ENST00000504181 TXLNGQ9NUQ3 528 aa12.09□□□□□ -0.47
LSM6-204ENST00000504181 ZNF358Q9NW07 568 aa12.09□□□□□ -0.47
LSM6-204ENST00000504181 COQ3Q9NZJ6 369 aa12.09□□□□□ -0.47
LSM6-204ENST00000504181 PTGFRNQ9P2B2 879 aa12.09□□□□□ -0.47
LSM6-204ENST00000504181 KCNN3Q9UGI6 736 aa12.09□□□□□ -0.47
LSM6-204ENST00000504181 ADAM21Q9UKJ8 722 aa12.09□□□□□ -0.47
LSM6-204ENST00000504181 GSAPA4D1B5 854 aa12.08□□□□□ -0.48
LSM6-204ENST00000504181 FAM227AF5H4B4 570 aa12.08□□□□□ -0.48
LSM6-204ENST00000504181 MAP3K7O43318 606 aa12.08□□□□□ -0.48
LSM6-204ENST00000504181 OR2B3O76000 313 aa12.08□□□□□ -0.48
LSM6-204ENST00000504181 HLA-DPA1P20036 260 aa12.08□□□□□ -0.48
LSM6-204ENST00000504181 DGKQP52824 942 aa12.08□□□□□ -0.48
LSM6-204ENST00000504181 KRT85P78386 507 aa12.08□□□□□ -0.48
LSM6-204ENST00000504181 CAMK4Q16566 473 aa12.08□□□□□ -0.48
LSM6-204ENST00000504181 DEFB110Q30KQ9 67 aa12.08□□□□□ -0.48
LSM6-204ENST00000504181 ANKRD20A8PQ5CZ79 823 aa12.08□□□□□ -0.48
LSM6-204ENST00000504181 FAM83HQ6ZRV2 1179 aaPredicted RBP12.08□□□□□ -0.48
LSM6-204ENST00000504181 SHISA6Q6ZSJ9 500 aa12.08□□□□□ -0.48
LSM6-204ENST00000504181 CREBRFQ8IUR6 639 aa12.08□□□□□ -0.48
LSM6-204ENST00000504181 PROKR1Q8TCW9 393 aa12.08□□□□□ -0.48
LSM6-204ENST00000504181 CCHCR1Q8TD31 782 aa12.08□□□□□ -0.48
LSM6-204ENST00000504181 PHF10Q8WUB8 498 aaKnown RBP12.08□□□□□ -0.48
LSM6-204ENST00000504181 SMARCE1Q969G3 411 aa12.08□□□□□ -0.48
LSM6-204ENST00000504181 NACC2Q96BF6 587 aa12.08□□□□□ -0.48
LSM6-204ENST00000504181 KCTD15Q96SI1 283 aaPredicted RBP12.08□□□□□ -0.48
LSM6-204ENST00000504181 POLDIP3Q9BY77 421 aaKnown RBP12.08□□□□□ -0.48
LSM6-204ENST00000504181 SPRTNQ9H040 489 aaPredicted RBP12.08□□□□□ -0.48
LSM6-204ENST00000504181 TSPAN10Q9H1Z9 355 aaPredicted RBP12.08□□□□□ -0.48
LSM6-204ENST00000504181 DEF6Q9H4E7 631 aa12.08□□□□□ -0.48
LSM6-204ENST00000504181 SLC24A2Q9UI40 661 aa12.08□□□□□ -0.48
LSM6-204ENST00000504181 FAM90A27PA6NNH2 459 aa12.07□□□□□ -0.48
LSM6-204ENST00000504181 UQCRHP07919 91 aa12.07□□□□□ -0.48
LSM6-204ENST00000504181 MSX1P28360 303 aa12.07□□□□□ -0.48
LSM6-204ENST00000504181 IHHQ14623 411 aa12.07□□□□□ -0.48
LSM6-204ENST00000504181 RBBP7Q16576 425 aa12.07□□□□□ -0.48
LSM6-204ENST00000504181 MARC1Q5VT66 337 aa12.07□□□□□ -0.48
LSM6-204ENST00000504181 TAB3Q8N5C8 712 aaPredicted RBP12.07□□□□□ -0.48
LSM6-204ENST00000504181 SIRT6Q8N6T7 355 aa12.07□□□□□ -0.48
LSM6-204ENST00000504181 GPR26Q8NDV2 337 aa12.07□□□□□ -0.48
LSM6-204ENST00000504181 OR11G2Q8NGC1 345 aa12.07□□□□□ -0.48
LSM6-204ENST00000504181 OR4E2Q8NGC2 313 aa12.07□□□□□ -0.48
LSM6-204ENST00000504181 SLC20A1Q8WUM9 679 aa12.07□□□□□ -0.48
LSM6-204ENST00000504181 HAS2Q92819 552 aa12.07□□□□□ -0.48
LSM6-204ENST00000504181 RMND5BQ96G75 393 aaPredicted RBP12.07□□□□□ -0.48
LSM6-204ENST00000504181 C12orf66Q96MD2 445 aa12.07□□□□□ -0.48
LSM6-204ENST00000504181 DMRTA2Q96SC8 542 aa12.07□□□□□ -0.48
LSM6-204ENST00000504181 MESP1Q9BRJ9 268 aa12.07□□□□□ -0.48
LSM6-204ENST00000504181 ZSCAN5AQ9BUG6 496 aa12.07□□□□□ -0.48
LSM6-204ENST00000504181 NUP85Q9BW27 656 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms