RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 STRADAQ7RTN6 431 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 TECPR1Q7Z6L1 1165 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 KCNMB4Q86W47 210 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 ZDHHC17Q8IUH5 632 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 HSCBQ8IWL3 235 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 SYTL1Q8IYJ3 562 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 FAM71AQ8IYT1 594 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 SLC34A3Q8N130 599 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 AMER2Q8N7J2 671 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 MSANTD4Q8NCY6 345 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 ST6GALNAC3Q8NDV1 305 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 CASKIN2Q8WXE0 1202 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 CXorf40BQ96DE9 158 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 CLIP3Q96DZ5 547 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 COX14Q96I36 57 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 KIRREL1Q96J84 757 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 WDR24Q96S15 920 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 SMAD5Q99717 465 aaKnown RBP3.54□□□□□ -1.84
USP46-205ENST00000504078 WDR77Q9BQA1 342 aaPredicted RBP3.54□□□□□ -1.84
USP46-205ENST00000504078 MESP1Q9BRJ9 268 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 SNRNP25Q9BV90 132 aaKnown RBP3.54□□□□□ -1.84
USP46-205ENST00000504078 VPS16Q9H269 839 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 TMPRSS5Q9H3S3 457 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 CATSPERBQ9H7T0 1116 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 PDE7BQ9NP56 450 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 NT5MQ9NPB1 228 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 WASH6PQ9NQA3 447 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 PRDM7Q9NQW5 492 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 SEMA3GQ9NS98 782 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 ETNK2Q9NVF9 386 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 ATXN10Q9UBB4 475 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 PCSK1NQ9UHG2 260 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 TCFL5Q9UL49 500 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 FZD10Q9ULW2 581 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 CDYLQ9Y232 598 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 CHKBQ9Y259 395 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 BTRCQ9Y297 605 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 WDR37Q9Y2I8 494 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 ZDHHC9Q9Y397 364 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 NF1P21359 2839 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 KIR2DS5A0A0G2JLQ3 304 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 A0A0G2JNG1 304 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 SSU72P8A0A1W2PR75 194 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 UBA6A0AVT1 1052 aaPredicted RBP3.53□□□□□ -1.84
USP46-205ENST00000504078 GSAPA4D1B5 854 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 CFAP69A5D8W1 941 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 GOLGA6L3A6NEY3 463 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 TLCD2A6NGC4 264 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 WASH4PA8MWX3 477 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 C9J4A7 227 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 F8VZ95 297 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 KIR2DS3K7RE56 304 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 EPHB6O15197 1021 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 PMM2O15305 246 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 TMPRSS2O15393 492 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 FGF10O15520 208 aaPredicted RBP3.53□□□□□ -1.84
USP46-205ENST00000504078 DAPK3O43293 454 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 HTRA2O43464 458 aaPredicted RBP3.53□□□□□ -1.84
USP46-205ENST00000504078 MFSD11O43934 449 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 SOCS5O75159 536 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 CNOT3O75175 753 aaKnown RBP3.53□□□□□ -1.84
USP46-205ENST00000504078 SMC2O95347 1197 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 MT-ND3P03897 115 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 ALPPP05187 535 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 CAPN1P07384 714 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 SLC2A4P14672 509 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 TCF4P15884 667 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 CHRNB2P17787 502 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 ERCC2P18074 760 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 POLR2CP19387 275 aaPredicted RBP3.53□□□□□ -1.84
USP46-205ENST00000504078 CYP2A7P20853 494 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 GJC1P36383 396 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 PTPN9P43378 593 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 KPNA2P52292 529 aaKnown RBP3.53□□□□□ -1.84
USP46-205ENST00000504078 NDST2P52849 883 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 SNX16P57768 344 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 YBEYP58557 167 aaPredicted RBP3.53□□□□□ -1.84
USP46-205ENST00000504078 RPL7AP62424 266 aaKnown RBP3.53□□□□□ -1.84
USP46-205ENST00000504078 ADORA2A-AS1P86434 159 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 TMPRSS15P98073 1019 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 TLE4Q04727 773 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 ITKQ08881 620 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 PTP4A2Q12974 167 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 PEX6Q13608 980 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 IHHQ14623 411 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 IL11RAQ14626 422 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 MYBPC3Q14896 1274 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 KIR2DS5Q14953 304 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 NOMO1Q15155 1222 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 SPRED3Q2MJR0 410 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 COBLL1Q53SF7 1204 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 VWA2Q5GFL6 755 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 CRB2Q5IJ48 1285 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 PLEKHS1Q5SXH7 462 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 MLIPQ5VWP3 458 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 WDR59Q6PJI9 974 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 FAM180AQ6UWF9 173 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 C3P1Q6ZMU1 363 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 BNC2Q6ZN30 1099 aaPredicted RBP3.53□□□□□ -1.84
USP46-205ENST00000504078 FAM83HQ6ZRV2 1179 aaPredicted RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms