RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 OR6C74A6NCV1 312 aa11.66□□□□□ -0.54
MED28-203ENST00000503945 OR5K3A6NET4 321 aa11.66□□□□□ -0.54
MED28-203ENST00000503945 ERI2A8K979 691 aaKnown RBP11.66□□□□□ -0.54
MED28-203ENST00000503945 E7EVH7 732 aa11.66□□□□□ -0.54
MED28-203ENST00000503945 IFRD1O00458 451 aaPredicted RBP11.66□□□□□ -0.54
MED28-203ENST00000503945 CCL22O00626 93 aa11.66□□□□□ -0.54
MED28-203ENST00000503945 KATNA1O75449 491 aa11.66□□□□□ -0.54
MED28-203ENST00000503945 KIAA0754O94854 1291 aa11.66□□□□□ -0.54
MED28-203ENST00000503945 AP2A1O95782 977 aa11.66□□□□□ -0.54
MED28-203ENST00000503945 DLGAP3O95886 979 aa11.66□□□□□ -0.54
MED28-203ENST00000503945 DLSTP36957 453 aa11.66□□□□□ -0.54
MED28-203ENST00000503945 ZNF140P52738 457 aaPredicted RBP11.66□□□□□ -0.54
MED28-203ENST00000503945 CACNG1Q06432 222 aa11.66□□□□□ -0.54
MED28-203ENST00000503945 SEPT6Q14141 434 aa11.66□□□□□ -0.54
MED28-203ENST00000503945 POU6F1Q14863 301 aa11.66□□□□□ -0.54
MED28-203ENST00000503945 C16orf46Q6P387 395 aa11.66□□□□□ -0.54
MED28-203ENST00000503945 SERPINA9Q86WD7 417 aa11.66□□□□□ -0.54
MED28-203ENST00000503945 KLHDC8BQ8IXV7 354 aa11.66□□□□□ -0.54
MED28-203ENST00000503945 DNAAF3Q8N9W5 541 aa11.66□□□□□ -0.54
MED28-203ENST00000503945 GALNT6Q8NCL4 622 aa11.66□□□□□ -0.54
MED28-203ENST00000503945 GPR150Q8NGU9 434 aa11.66□□□□□ -0.54
MED28-203ENST00000503945 NAT14Q8WUY8 206 aa11.66□□□□□ -0.54
MED28-203ENST00000503945 LCN9Q8WX39 176 aa11.66□□□□□ -0.54
MED28-203ENST00000503945 SLC41A2Q96JW4 573 aa11.66□□□□□ -0.54
MED28-203ENST00000503945 DNAJC1Q96KC8 554 aaKnown RBP11.66□□□□□ -0.54
MED28-203ENST00000503945 TTC1Q99614 292 aa11.66□□□□□ -0.54
MED28-203ENST00000503945 MAP3K3Q99759 626 aa11.66□□□□□ -0.54
MED28-203ENST00000503945 SRMSQ9H3Y6 488 aa11.66□□□□□ -0.54
MED28-203ENST00000503945 KIR3DX1Q9H7L2 352 aa11.66□□□□□ -0.54
MED28-203ENST00000503945 LNPEPQ9UIQ6 1025 aa11.66□□□□□ -0.54
MED28-203ENST00000503945 ZNF148Q9UQR1 794 aa11.66□□□□□ -0.54
MED28-203ENST00000503945 R3HDM2Q9Y2K5 976 aaKnown RBP11.66□□□□□ -0.54
MED28-203ENST00000503945 FLNCQ14315 2725 aa11.65□□□□□ -0.54
MED28-203ENST00000503945 A0A0U1RQJ8 604 aa11.65□□□□□ -0.54
MED28-203ENST00000503945 TCRBV7S2A1N4TA0A589 114 aa11.65□□□□□ -0.54
MED28-203ENST00000503945 H7C0S8 307 aa11.65□□□□□ -0.54
MED28-203ENST00000503945 SGTAO43765 313 aa11.65□□□□□ -0.54
MED28-203ENST00000503945 AP2A2O94973 939 aa11.65□□□□□ -0.54
MED28-203ENST00000503945 ZBTB11O95625 1053 aaPredicted RBP11.65□□□□□ -0.54
MED28-203ENST00000503945 IFNB1P01574 187 aa11.65□□□□□ -0.54
MED28-203ENST00000503945 GSTM1P09488 218 aa11.65□□□□□ -0.54
MED28-203ENST00000503945 PRKAR1AP10644 381 aa11.65□□□□□ -0.54
MED28-203ENST00000503945 FOLR1P15328 257 aa11.65□□□□□ -0.54
MED28-203ENST00000503945 ZNF28P17035 718 aa11.65□□□□□ -0.54
MED28-203ENST00000503945 ACRV1P26436 265 aa11.65□□□□□ -0.54
MED28-203ENST00000503945 STAT5AP42229 794 aa11.65□□□□□ -0.54
MED28-203ENST00000503945 CD151P48509 253 aa11.65□□□□□ -0.54
MED28-203ENST00000503945 PRLHRP49683 370 aa11.65□□□□□ -0.54
MED28-203ENST00000503945 CDKN1CP49918 316 aaPredicted RBP11.65□□□□□ -0.54
MED28-203ENST00000503945 GDF10P55107 478 aa11.65□□□□□ -0.54
MED28-203ENST00000503945 POLE2P56282 527 aa11.65□□□□□ -0.54
MED28-203ENST00000503945 GSTM4Q03013 218 aa11.65□□□□□ -0.54
MED28-203ENST00000503945 RPA4Q13156 261 aa11.65□□□□□ -0.54
MED28-203ENST00000503945 KCNAB2Q13303 367 aa11.65□□□□□ -0.54
MED28-203ENST00000503945 TUBB3Q13509 450 aa11.65□□□□□ -0.54
MED28-203ENST00000503945 RPS6KA1Q15418 735 aa11.65□□□□□ -0.54
MED28-203ENST00000503945 IGFBP7Q16270 282 aa11.65□□□□□ -0.54
MED28-203ENST00000503945 DEFB109BQ30KR1 87 aa11.65□□□□□ -0.54
MED28-203ENST00000503945 CRTC2Q53ET0 693 aaPredicted RBP11.65□□□□□ -0.54
MED28-203ENST00000503945 SEL1L2Q5TEA6 688 aa11.65□□□□□ -0.54
MED28-203ENST00000503945 TAB3Q8N5C8 712 aaPredicted RBP11.65□□□□□ -0.54
MED28-203ENST00000503945 PHC3Q8NDX5 983 aa11.65□□□□□ -0.54
MED28-203ENST00000503945 ACVR1CQ8NER5 493 aa11.65□□□□□ -0.54
MED28-203ENST00000503945 HM13Q8TCT9 377 aa11.65□□□□□ -0.54
MED28-203ENST00000503945 APOBEC4Q8WW27 367 aaKnown RBP11.65□□□□□ -0.54
MED28-203ENST00000503945 ETNK1Q9HBU6 452 aa11.65□□□□□ -0.54
MED28-203ENST00000503945 KCND1Q9NSA2 647 aa11.65□□□□□ -0.54
MED28-203ENST00000503945 SMARCAL1Q9NZC9 954 aa11.65□□□□□ -0.54
MED28-203ENST00000503945 TRBV5-4A0A0C4DH59 114 aa11.64□□□□□ -0.55
MED28-203ENST00000503945 PIPSLA2A3N6 862 aa11.64□□□□□ -0.55
MED28-203ENST00000503945 TLCD2A6NGC4 264 aa11.64□□□□□ -0.55
MED28-203ENST00000503945 MROH6A6NGR9 719 aa11.64□□□□□ -0.55
MED28-203ENST00000503945 F8W8V4 182 aa11.64□□□□□ -0.55
MED28-203ENST00000503945 MATN2O00339 956 aa11.64□□□□□ -0.55
MED28-203ENST00000503945 QSOX1O00391 747 aa11.64□□□□□ -0.55
MED28-203ENST00000503945 NTRK1P04629 796 aa11.64□□□□□ -0.55
MED28-203ENST00000503945 POLR2CP19387 275 aaPredicted RBP11.64□□□□□ -0.55
MED28-203ENST00000503945 PPARGP37231 505 aaPredicted RBP11.64□□□□□ -0.55
MED28-203ENST00000503945 FDFT1P37268 417 aa11.64□□□□□ -0.55
MED28-203ENST00000503945 NSG1P42857 185 aa11.64□□□□□ -0.55
MED28-203ENST00000503945 GSDMDP57764 484 aa11.64□□□□□ -0.55
MED28-203ENST00000503945 PPP1CAP62136 330 aa11.64□□□□□ -0.55
MED28-203ENST00000503945 TUBB4BP68371 445 aa11.64□□□□□ -0.55
MED28-203ENST00000503945 CDH17Q12864 832 aa11.64□□□□□ -0.55
MED28-203ENST00000503945 TUBB2AQ13885 445 aa11.64□□□□□ -0.55
MED28-203ENST00000503945 UBAP2LQ14157 1087 aaKnown RBP11.64□□□□□ -0.55
MED28-203ENST00000503945 ERV3-1Q14264 604 aa11.64□□□□□ -0.55
MED28-203ENST00000503945 KCNAB1Q14722 419 aa11.64□□□□□ -0.55
MED28-203ENST00000503945 LYPLAL1Q5VWZ2 237 aa11.64□□□□□ -0.55
MED28-203ENST00000503945 PWWP2BQ6NUJ5 590 aa11.64□□□□□ -0.55
MED28-203ENST00000503945 PPP1R21Q6ZMI0 780 aa11.64□□□□□ -0.55
MED28-203ENST00000503945 SLC13A5Q86YT5 568 aaPredicted RBP11.64□□□□□ -0.55
MED28-203ENST00000503945 CARFQ8N187 725 aa11.64□□□□□ -0.55
MED28-203ENST00000503945 D2HGDHQ8N465 521 aa11.64□□□□□ -0.55
MED28-203ENST00000503945 CLDN19Q8N6F1 224 aa11.64□□□□□ -0.55
MED28-203ENST00000503945 OR52K1Q8NGK4 314 aa11.64□□□□□ -0.55
MED28-203ENST00000503945 OR8K5Q8NH50 307 aa11.64□□□□□ -0.55
MED28-203ENST00000503945 STARD8Q92502 1023 aa11.64□□□□□ -0.55
MED28-203ENST00000503945 TFGQ92734 400 aaPredicted RBP11.64□□□□□ -0.55
MED28-203ENST00000503945 RNF31Q96EP0 1072 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms