RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 DEFB109BQ30KR1 87 aa18.95■□□□□ 0.62
UBE2D3-215ENST00000503418 CERS6Q6ZMG9 384 aa18.95■□□□□ 0.62
UBE2D3-215ENST00000503418 RNF10Q8N5U6 811 aaKnown RBP18.95■□□□□ 0.62
UBE2D3-215ENST00000503418 OR4E2Q8NGC2 313 aa18.95■□□□□ 0.62
UBE2D3-215ENST00000503418 STYXQ8WUJ0 223 aa18.95■□□□□ 0.62
UBE2D3-215ENST00000503418 COG4Q9H9E3 785 aa18.95■□□□□ 0.62
UBE2D3-215ENST00000503418 VPS37BQ9H9H4 285 aa18.95■□□□□ 0.62
UBE2D3-215ENST00000503418 GUCA1BQ9UMX6 200 aa18.95■□□□□ 0.62
UBE2D3-215ENST00000503418 IGLV3-16A0A075B6K0 115 aa18.94■□□□□ 0.62
UBE2D3-215ENST00000503418 TRBV5-4A0A0C4DH59 114 aa18.94■□□□□ 0.62
UBE2D3-215ENST00000503418 C17orf113A0A1B0GUU1 675 aa18.94■□□□□ 0.62
UBE2D3-215ENST00000503418 KATNA1O75449 491 aa18.94■□□□□ 0.62
UBE2D3-215ENST00000503418 TIAF1O95411 115 aa18.94■□□□□ 0.62
UBE2D3-215ENST00000503418 CCNYL3P0C7X3 344 aa18.94■□□□□ 0.62
UBE2D3-215ENST00000503418 POLR2CP19387 275 aaPredicted RBP18.94■□□□□ 0.62
UBE2D3-215ENST00000503418 ACY1Q03154 408 aa18.94■□□□□ 0.62
UBE2D3-215ENST00000503418 CACNG1Q06432 222 aa18.94■□□□□ 0.62
UBE2D3-215ENST00000503418 PRKAA1Q13131 559 aa18.94■□□□□ 0.62
UBE2D3-215ENST00000503418 KMT5CQ86Y97 462 aa18.94■□□□□ 0.62
UBE2D3-215ENST00000503418 CLDN19Q8N6F1 224 aa18.94■□□□□ 0.62
UBE2D3-215ENST00000503418 DNAAF3Q8N9W5 541 aa18.94■□□□□ 0.62
UBE2D3-215ENST00000503418 OR52K1Q8NGK4 314 aa18.94■□□□□ 0.62
UBE2D3-215ENST00000503418 CDKN2AIPNLQ96HQ2 116 aa18.94■□□□□ 0.62
UBE2D3-215ENST00000503418 FERD3LQ96RJ6 166 aa18.94■□□□□ 0.62
UBE2D3-215ENST00000503418 TSGA10Q9BZW7 698 aa18.94■□□□□ 0.62
UBE2D3-215ENST00000503418 TRIM4Q9C037 500 aa18.94■□□□□ 0.62
UBE2D3-215ENST00000503418 FGF21Q9NSA1 209 aa18.94■□□□□ 0.62
UBE2D3-215ENST00000503418 SOHLH2Q9NX45 425 aa18.94■□□□□ 0.62
UBE2D3-215ENST00000503418 PCDHB3Q9Y5E6 796 aa18.94■□□□□ 0.62
UBE2D3-215ENST00000503418 GOLGA6L3A6NEY3 463 aa18.93■□□□□ 0.62
UBE2D3-215ENST00000503418 IFRD1O00458 451 aaPredicted RBP18.93■□□□□ 0.62
UBE2D3-215ENST00000503418 KRT86O43790 486 aa18.93■□□□□ 0.62
UBE2D3-215ENST00000503418 IFNB1P01574 187 aa18.93■□□□□ 0.62
UBE2D3-215ENST00000503418 MT-ND3P03897 115 aa18.93■□□□□ 0.62
UBE2D3-215ENST00000503418 LMAN1P49257 510 aa18.93■□□□□ 0.62
UBE2D3-215ENST00000503418 KPNA2P52292 529 aaKnown RBP18.93■□□□□ 0.62
UBE2D3-215ENST00000503418 HSD11B2P80365 405 aa18.93■□□□□ 0.62
UBE2D3-215ENST00000503418 DBN1Q16643 649 aa18.93■□□□□ 0.62
UBE2D3-215ENST00000503418 CCDC38Q502W7 563 aa18.93■□□□□ 0.62
UBE2D3-215ENST00000503418 PWWP2BQ6NUJ5 590 aa18.93■□□□□ 0.62
UBE2D3-215ENST00000503418 ZNF449Q6P9G9 518 aa18.93■□□□□ 0.62
UBE2D3-215ENST00000503418 FBXO38Q6PIJ6 1188 aa18.93■□□□□ 0.62
UBE2D3-215ENST00000503418 LINC00523Q86TU6 105 aa18.93■□□□□ 0.62
UBE2D3-215ENST00000503418 PIANPQ8IYJ0 282 aa18.93■□□□□ 0.62
UBE2D3-215ENST00000503418 ACVR1CQ8NER5 493 aa18.93■□□□□ 0.62
UBE2D3-215ENST00000503418 LCN9Q8WX39 176 aa18.93■□□□□ 0.62
UBE2D3-215ENST00000503418 PPM1MQ96MI6 270 aa18.93■□□□□ 0.62
UBE2D3-215ENST00000503418 SMARCAL1Q9NZC9 954 aa18.93■□□□□ 0.62
UBE2D3-215ENST00000503418 PADI1Q9ULC6 663 aa18.93■□□□□ 0.62
UBE2D3-215ENST00000503418 GSAPA4D1B5 854 aa18.92■□□□□ 0.62
UBE2D3-215ENST00000503418 OR51F1A6NGY5 319 aa18.92■□□□□ 0.62
UBE2D3-215ENST00000503418 LIASO43766 372 aa18.92■□□□□ 0.62
UBE2D3-215ENST00000503418 ZBTB11O95625 1053 aaPredicted RBP18.92■□□□□ 0.62
UBE2D3-215ENST00000503418 GAS8O95995 478 aa18.92■□□□□ 0.62
UBE2D3-215ENST00000503418 NTRK1P04629 796 aa18.92■□□□□ 0.62
UBE2D3-215ENST00000503418 MSNP26038 577 aaKnown RBP18.92■□□□□ 0.62
UBE2D3-215ENST00000503418 PDHA2P29803 388 aa18.92■□□□□ 0.62
UBE2D3-215ENST00000503418 STIP1P31948 543 aaKnown RBP18.92■□□□□ 0.62
UBE2D3-215ENST00000503418 PREPP48147 710 aa18.92■□□□□ 0.62
UBE2D3-215ENST00000503418 CDH17Q12864 832 aa18.92■□□□□ 0.62
UBE2D3-215ENST00000503418 ERV3-1Q14264 604 aa18.92■□□□□ 0.62
UBE2D3-215ENST00000503418 GPR19Q15760 415 aa18.92■□□□□ 0.62
UBE2D3-215ENST00000503418 SKIDA1Q1XH10 827 aa18.92■□□□□ 0.62
UBE2D3-215ENST00000503418 TMTC4Q5T4D3 741 aa18.92■□□□□ 0.62
UBE2D3-215ENST00000503418 PPP1R21Q6ZMI0 780 aa18.92■□□□□ 0.62
UBE2D3-215ENST00000503418 PTRH1Q86Y79 214 aaKnown RBP18.92■□□□□ 0.62
UBE2D3-215ENST00000503418 D2HGDHQ8N465 521 aa18.92■□□□□ 0.62
UBE2D3-215ENST00000503418 APOBEC4Q8WW27 367 aaKnown RBP18.92■□□□□ 0.62
UBE2D3-215ENST00000503418 C1orf54Q8WWF1 131 aa18.92■□□□□ 0.62
UBE2D3-215ENST00000503418 OR52A5Q9H2C5 316 aa18.92■□□□□ 0.62
UBE2D3-215ENST00000503418 SRMSQ9H3Y6 488 aa18.92■□□□□ 0.62
UBE2D3-215ENST00000503418 ETNK1Q9HBU6 452 aa18.92■□□□□ 0.62
UBE2D3-215ENST00000503418 LHX9Q9NQ69 397 aa18.92■□□□□ 0.62
UBE2D3-215ENST00000503418 KCND3Q9UK17 655 aa18.92■□□□□ 0.62
UBE2D3-215ENST00000503418 ZNF148Q9UQR1 794 aa18.92■□□□□ 0.62
UBE2D3-215ENST00000503418 MROH6A6NGR9 719 aa18.91■□□□□ 0.62
UBE2D3-215ENST00000503418 E7EVH7 732 aa18.91■□□□□ 0.62
UBE2D3-215ENST00000503418 CDH3P22223 829 aa18.91■□□□□ 0.62
UBE2D3-215ENST00000503418 FDFT1P37268 417 aa18.91■□□□□ 0.62
UBE2D3-215ENST00000503418 TUBB4BP68371 445 aa18.91■□□□□ 0.62
UBE2D3-215ENST00000503418 SNX1Q13596 522 aa18.91■□□□□ 0.62
UBE2D3-215ENST00000503418 DNASE1L3Q13609 305 aa18.91■□□□□ 0.62
UBE2D3-215ENST00000503418 TUBB2AQ13885 445 aa18.91■□□□□ 0.62
UBE2D3-215ENST00000503418 OASLQ15646 514 aaKnown RBP18.91■□□□□ 0.62
UBE2D3-215ENST00000503418 CRTC2Q53ET0 693 aaPredicted RBP18.91■□□□□ 0.62
UBE2D3-215ENST00000503418 ATG14Q6ZNE5 492 aa18.91■□□□□ 0.62
UBE2D3-215ENST00000503418 BPHLQ86WA6 291 aaPredicted RBP18.91■□□□□ 0.62
UBE2D3-215ENST00000503418 SLC13A5Q86YT5 568 aaPredicted RBP18.91■□□□□ 0.62
UBE2D3-215ENST00000503418 TMEM126BQ8IUX1 230 aa18.91■□□□□ 0.62
UBE2D3-215ENST00000503418 PHC3Q8NDX5 983 aa18.91■□□□□ 0.62
UBE2D3-215ENST00000503418 CT55Q8WUE5 264 aa18.91■□□□□ 0.62
UBE2D3-215ENST00000503418 HGH1Q9BTY7 390 aa18.91■□□□□ 0.62
UBE2D3-215ENST00000503418 TUBB2BQ9BVA1 445 aa18.91■□□□□ 0.62
UBE2D3-215ENST00000503418 FRMD8P1Q9BZ68 369 aaPredicted RBP18.91■□□□□ 0.62
UBE2D3-215ENST00000503418 TUBD1Q9UJT1 453 aa18.91■□□□□ 0.62
UBE2D3-215ENST00000503418 SPTA1P02549 2419 aa18.91■□□□□ 0.62
UBE2D3-215ENST00000503418 TLN1Q9Y490 2541 aaKnown RBP18.91■□□□□ 0.62
UBE2D3-215ENST00000503418 ERI2A8K979 691 aaKnown RBP18.9■□□□□ 0.62
UBE2D3-215ENST00000503418 TERTO14746 1132 aaKnown RBP18.9■□□□□ 0.62
UBE2D3-215ENST00000503418 SUV39H1O43463 412 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms