RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 ACRV1P26436 265 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 HOXC12P31275 282 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 UGT1A3P35503 534 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 UGT1A5P35504 534 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 CRY1Q16526 586 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 LRRC23Q53EV4 343 aaPredicted RBP11.4□□□□□ -0.58
USP46-204ENST00000503060 CARD16Q5EG05 197 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 LYPLAL1Q5VWZ2 237 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 DBX2Q6ZNG2 339 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 TPRG1Q6ZUI0 275 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 PCDH20Q8N6Y1 951 aaKnown RBP11.4□□□□□ -0.58
USP46-204ENST00000503060 HIC2Q96JB3 615 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 BBS2Q9BXC9 721 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 CEP44Q9C0F1 390 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 FBRSL1Q9HCM7 1045 aaKnown RBP11.4□□□□□ -0.58
USP46-204ENST00000503060 NUDT4Q9NZJ9 180 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 CD274Q9NZQ7 290 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 CRLS1Q9UJA2 301 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 PRSS21Q9Y6M0 314 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 SLC4A7Q9Y6M7 1214 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 ZNF106Q9H2Y7 1883 aaKnown RBP11.39□□□□□ -0.59
USP46-204ENST00000503060 A0A1B0GTL3 188 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 CFLARO15519 480 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 ALDOCP09972 364 aaKnown RBP11.39□□□□□ -0.59
USP46-204ENST00000503060 ATP6V1B1P15313 513 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 PTPN5P54829 565 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 SEMG2Q02383 582 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 STX5Q13190 355 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 GPR33Q49SQ1 333 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 CMPK2Q5EBM0 449 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 PIGGQ5H8A4 983 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 FCRLBQ6BAA4 426 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 PSRC1Q6PGN9 363 aaPredicted RBP11.39□□□□□ -0.59
USP46-204ENST00000503060 DDIASQ8IXT1 998 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 C7orf57Q8NEG2 295 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 LKAAEAR1Q8TD35 194 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 DNAJC9Q8WXX5 260 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 SCRN2Q96FV2 425 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 C17orf80Q9BSJ5 609 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 MRPL1Q9BYD6 325 aaKnown RBP11.39□□□□□ -0.59
USP46-204ENST00000503060 CPEB1Q9BZB8 566 aaKnown RBP11.39□□□□□ -0.59
USP46-204ENST00000503060 CIPCQ9C0C6 399 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 TUBB1Q9H4B7 451 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 ZDHHC6Q9H6R6 413 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 SLCO3A1Q9UIG8 710 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 PACSIN3Q9UKS6 424 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 PPIL1Q9Y3C6 166 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 PTGDR2Q9Y5Y4 395 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 SOBPA7XYQ1 873 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 CRCPO75575 148 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 POP4O95707 220 aaKnown RBP11.39□□□□□ -0.59
USP46-204ENST00000503060 EPCAMP16422 314 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 ITGB6P18564 788 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 PSMA4P25789 261 aaKnown RBP11.39□□□□□ -0.59
USP46-204ENST00000503060 DPP6P42658 865 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 NTHL1P78549 312 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 SSPNQ14714 243 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 TGFBIQ15582 683 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 ZNF77Q15935 545 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 ZNF423Q2M1K9 1284 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 NEK5Q6P3R8 708 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 DPY19L3Q6ZPD9 716 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 USP45Q70EL2 814 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 ADGRG6Q86SQ4 1221 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 SYVN1Q86TM6 617 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 PHYKPLQ8IUZ5 450 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 ZNF557Q8N988 423 aaPredicted RBP11.39□□□□□ -0.59
USP46-204ENST00000503060 LEMD2Q8NC56 503 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 PPFIBP2Q8ND30 876 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 GPR26Q8NDV2 337 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 SLC26A7Q8TE54 656 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 NAT14Q8WUY8 206 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 PYDC1Q8WXC3 89 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 HGH1Q9BTY7 390 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 LINC00597Q9H2U6 94 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 SPHK2Q9NRA0 654 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 CCDC167Q9P0B6 97 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 ZNF624Q9P2J8 865 aaPredicted RBP11.39□□□□□ -0.59
USP46-204ENST00000503060 EIF2B4Q9UI10 523 aaKnown RBP11.39□□□□□ -0.59
USP46-204ENST00000503060 SSUH2Q9Y2M2 353 aa11.39□□□□□ -0.59
USP46-204ENST00000503060 C17orf113A0A1B0GUU1 675 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 ESRRBO95718 433 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 MLYCDO95822 493 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 SNRPB2P08579 225 aaKnown RBP11.38□□□□□ -0.59
USP46-204ENST00000503060 TYRP14679 529 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 TYRP1P17643 537 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 ATP6V1C1P21283 382 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 HOXA9P31269 272 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 IRS1P35568 1242 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 THOP1P52888 689 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 STX1BP61266 288 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 B2MP61769 119 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 RACK1P63244 317 aaKnown RBP11.38□□□□□ -0.59
USP46-204ENST00000503060 ECT2LQ008S8 904 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 UBE3AQ05086 875 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 RUNX1T1Q06455 604 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 DMC1Q14565 340 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 PRSS36Q5K4E3 855 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 LRRC66Q68CR7 880 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 MACC1Q6ZN28 852 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms