RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 EPHA4P54764 986 aa24.54■■□□□ 1.52
LSM6-202ENST00000502781 GPX6P59796 221 aa24.54■■□□□ 1.52
LSM6-202ENST00000502781 MGAT5Q09328 741 aa24.54■■□□□ 1.52
LSM6-202ENST00000502781 CNSTQ6PJW8 725 aa24.54■■□□□ 1.52
LSM6-202ENST00000502781 CCDC25Q86WR0 208 aa24.54■■□□□ 1.52
LSM6-202ENST00000502781 ZNF761Q86XN6 746 aaPredicted RBP24.54■■□□□ 1.52
LSM6-202ENST00000502781 RELL1Q8IUW5 271 aa24.54■■□□□ 1.52
LSM6-202ENST00000502781 TRIM48Q8IWZ4 208 aa24.54■■□□□ 1.52
LSM6-202ENST00000502781 PALM2Q8IXS6 379 aa24.54■■□□□ 1.52
LSM6-202ENST00000502781 SLC22A15Q8IZD6 547 aa24.54■■□□□ 1.52
LSM6-202ENST00000502781 TMEM159Q96B96 161 aa24.54■■□□□ 1.52
LSM6-202ENST00000502781 SLC38A3Q99624 504 aa24.54■■□□□ 1.52
LSM6-202ENST00000502781 IMP3Q9NV31 184 aaKnown RBP24.54■■□□□ 1.52
LSM6-202ENST00000502781 CFAP20Q9Y6A4 193 aaKnown RBP24.54■■□□□ 1.52
LSM6-202ENST00000502781 COL27A1Q8IZC6 1860 aaPredicted RBP24.53■■□□□ 1.52
LSM6-202ENST00000502781 UNC13CQ8NB66 2214 aa24.53■■□□□ 1.52
LSM6-202ENST00000502781 KPNA5O15131 536 aa24.53■■□□□ 1.52
LSM6-202ENST00000502781 NIPSNAP2O75323 286 aa24.53■■□□□ 1.52
LSM6-202ENST00000502781 C1QAP02745 245 aa24.53■■□□□ 1.52
LSM6-202ENST00000502781 AHSGP02765 367 aa24.53■■□□□ 1.52
LSM6-202ENST00000502781 PDX1P52945 283 aa24.53■■□□□ 1.52
LSM6-202ENST00000502781 GPLD1P80108 840 aa24.53■■□□□ 1.52
LSM6-202ENST00000502781 CUL1Q13616 776 aa24.53■■□□□ 1.52
LSM6-202ENST00000502781 GBX1Q14549 363 aa24.53■■□□□ 1.52
LSM6-202ENST00000502781 BRD3Q15059 726 aa24.53■■□□□ 1.52
LSM6-202ENST00000502781 CLPPQ16740 277 aaPredicted RBP24.53■■□□□ 1.52
LSM6-202ENST00000502781 ZFPM2Q8WW38 1151 aa24.53■■□□□ 1.52
LSM6-202ENST00000502781 IFT81Q8WYA0 676 aa24.53■■□□□ 1.52
LSM6-202ENST00000502781 KCNJ9Q92806 393 aa24.53■■□□□ 1.52
LSM6-202ENST00000502781 C9orf72Q96LT7 481 aa24.53■■□□□ 1.52
LSM6-202ENST00000502781 GFM1Q96RP9 751 aaKnown RBP24.53■■□□□ 1.52
LSM6-202ENST00000502781 SCNM1Q9BWG6 230 aa24.53■■□□□ 1.52
LSM6-202ENST00000502781 PPANQ9NQ55 473 aaKnown RBP24.53■■□□□ 1.52
LSM6-202ENST00000502781 KCNK4Q9NYG8 393 aa24.53■■□□□ 1.52
LSM6-202ENST00000502781 SLC17A6Q9P2U8 582 aa24.53■■□□□ 1.52
LSM6-202ENST00000502781 MTRF1LQ9UGC7 380 aaKnown RBP24.53■■□□□ 1.52
LSM6-202ENST00000502781 CLCA2Q9UQC9 943 aa24.53■■□□□ 1.52
LSM6-202ENST00000502781 COMMD10Q9Y6G5 202 aa24.53■■□□□ 1.52
LSM6-202ENST00000502781 D6RAR5 112 aa24.52■■□□□ 1.52
LSM6-202ENST00000502781 APOA4P06727 396 aa24.52■■□□□ 1.52
LSM6-202ENST00000502781 HSPA14Q0VDF9 509 aa24.52■■□□□ 1.52
LSM6-202ENST00000502781 SPIDRQ14159 915 aa24.52■■□□□ 1.52
LSM6-202ENST00000502781 GPR18Q14330 331 aa24.52■■□□□ 1.52
LSM6-202ENST00000502781 SYTL3Q4VX76 610 aa24.52■■□□□ 1.52
LSM6-202ENST00000502781 VRK3Q8IV63 474 aa24.52■■□□□ 1.52
LSM6-202ENST00000502781 TSPYL1Q9H0U9 437 aa24.52■■□□□ 1.52
LSM6-202ENST00000502781 LRRC4CQ9HCJ2 640 aa24.52■■□□□ 1.52
LSM6-202ENST00000502781 HEBP2Q9Y5Z4 205 aa24.52■■□□□ 1.52
LSM6-202ENST00000502781 PTPRBP23467 1997 aa24.51■■□□□ 1.51
LSM6-202ENST00000502781 TCRBV9S1A1TA0A576 114 aa24.51■■□□□ 1.51
LSM6-202ENST00000502781 IFRD1O00458 451 aaPredicted RBP24.51■■□□□ 1.51
LSM6-202ENST00000502781 RHOXF2BP0C7M4 288 aa24.51■■□□□ 1.51
LSM6-202ENST00000502781 NDUFS1P28331 727 aa24.51■■□□□ 1.51
LSM6-202ENST00000502781 TMED2Q15363 201 aa24.51■■□□□ 1.51
LSM6-202ENST00000502781 PLEKHS1Q5SXH7 462 aa24.51■■□□□ 1.51
LSM6-202ENST00000502781 DUS1LQ6P1R4 473 aaKnown RBP24.51■■□□□ 1.51
LSM6-202ENST00000502781 RBM44Q6ZP01 1051 aaKnown RBP24.51■■□□□ 1.51
LSM6-202ENST00000502781 C3orf62Q6ZUJ4 267 aa24.51■■□□□ 1.51
LSM6-202ENST00000502781 OTOAQ7RTW8 1153 aa24.51■■□□□ 1.51
LSM6-202ENST00000502781 IFT20Q8IY31 132 aa24.51■■□□□ 1.51
LSM6-202ENST00000502781 TFGQ92734 400 aaPredicted RBP24.51■■□□□ 1.51
LSM6-202ENST00000502781 RHOXF2Q9BQY4 288 aa24.51■■□□□ 1.51
LSM6-202ENST00000502781 AARSD1Q9BTE6 412 aaKnown RBP24.51■■□□□ 1.51
LSM6-202ENST00000502781 TBC1D10AQ9BXI6 508 aa24.51■■□□□ 1.51
LSM6-202ENST00000502781 EPB41L1Q9H4G0 881 aa24.51■■□□□ 1.51
LSM6-202ENST00000502781 SMYD2Q9NRG4 433 aa24.51■■□□□ 1.51
LSM6-202ENST00000502781 ZFATQ9P243 1243 aa24.51■■□□□ 1.51
LSM6-202ENST00000502781 KLHL42Q9P2K6 505 aa24.51■■□□□ 1.51
LSM6-202ENST00000502781 GALPQ9UBC7 116 aa24.51■■□□□ 1.51
LSM6-202ENST00000502781 KLK13Q9UKR3 277 aa24.51■■□□□ 1.51
LSM6-202ENST00000502781 NEUROG3Q9Y4Z2 214 aa24.51■■□□□ 1.51
LSM6-202ENST00000502781 CPNE6O95741 557 aa24.5■■□□□ 1.51
LSM6-202ENST00000502781 JUPP14923 745 aa24.5■■□□□ 1.51
LSM6-202ENST00000502781 SPINK2P20155 84 aa24.5■■□□□ 1.51
LSM6-202ENST00000502781 CHRM3P20309 590 aa24.5■■□□□ 1.51
LSM6-202ENST00000502781 CLCN7P51798 805 aa24.5■■□□□ 1.51
LSM6-202ENST00000502781 CFHR1Q03591 330 aa24.5■■□□□ 1.51
LSM6-202ENST00000502781 CAPN12Q6ZSI9 719 aa24.5■■□□□ 1.51
LSM6-202ENST00000502781 CEP128Q6ZU80 1094 aa24.5■■□□□ 1.51
LSM6-202ENST00000502781 TMPRSS9Q7Z410 1059 aa24.5■■□□□ 1.51
LSM6-202ENST00000502781 SLC26A11Q86WA9 606 aa24.5■■□□□ 1.51
LSM6-202ENST00000502781 DEPDC7Q96QD5 511 aa24.5■■□□□ 1.51
LSM6-202ENST00000502781 FMO2Q99518 471 aa24.5■■□□□ 1.51
LSM6-202ENST00000502781 MCMBPQ9BTE3 642 aa24.5■■□□□ 1.51
LSM6-202ENST00000502781 CCDC68Q9H2F9 335 aa24.5■■□□□ 1.51
LSM6-202ENST00000502781 KIR3DX1Q9H7L2 352 aa24.5■■□□□ 1.51
LSM6-202ENST00000502781 PSAT1Q9Y617 370 aa24.5■■□□□ 1.51
LSM6-202ENST00000502781 COLEC10Q9Y6Z7 277 aa24.5■■□□□ 1.51
LSM6-202ENST00000502781 SPAG6O75602 509 aa24.49■■□□□ 1.51
LSM6-202ENST00000502781 FOXK2Q01167 660 aa24.49■■□□□ 1.51
LSM6-202ENST00000502781 TARDBPQ13148 414 aaKnown RBP eCLIP24.49■■□□□ 1.51
LSM6-202ENST00000502781 ISXQ2M1V0 245 aa24.49■■□□□ 1.51
LSM6-202ENST00000502781 AMZ1Q400G9 498 aa24.49■■□□□ 1.51
LSM6-202ENST00000502781 NKAIN2Q5VXU1 208 aa24.49■■□□□ 1.51
LSM6-202ENST00000502781 CCNI2Q6ZMN8 369 aaPredicted RBP24.49■■□□□ 1.51
LSM6-202ENST00000502781 OR10G6Q8NH81 332 aa24.49■■□□□ 1.51
LSM6-202ENST00000502781 MVB12BQ9H7P6 319 aa24.49■■□□□ 1.51
LSM6-202ENST00000502781 RDH14Q9HBH5 336 aa24.49■■□□□ 1.51
LSM6-202ENST00000502781 OGFRQ9NZT2 677 aa24.49■■□□□ 1.51
LSM6-202ENST00000502781 SLC24A2Q9UI40 661 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms