RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 ERVH48-1M5A8F1 160 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 EPN2O95208 641 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 GUCA1CO95843 209 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 YES1P07947 543 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 UBL4AP11441 157 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 NPR1P16066 1061 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 SSTR4P31391 388 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 CCT3P49368 545 aaKnown RBP10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 CDKN2DP55273 166 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 KRR1Q13601 381 aaKnown RBP10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 DPY19L3Q6ZPD9 716 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 BEND5Q7L4P6 421 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 B3GNT8Q7Z7M8 397 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 TMEM179BQ7Z7N9 219 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 OSTM1Q86WC4 334 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 GTF2H4Q92759 462 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 TEKT5Q96M29 485 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 BARD1Q99728 777 aaKnown RBP10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 ACAD9Q9H845 621 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 CARS2Q9HA77 564 aaKnown RBP10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 NECTIN3Q9NQS3 549 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 KRT84Q9NSB2 600 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 ZNF224Q9NZL3 707 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 TARM1B6A8C7 271 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 NUPL2O15504 423 aaKnown RBP10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 SLC10A3P09131 477 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 CNPP09543 421 aaKnown RBP10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 PRSS56P0CW18 603 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 PSKH1P11801 424 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 LIPAP38571 399 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 ATN1P54259 1190 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 TUBA1BP68363 451 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 FAM189BP81408 668 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 LRRC26Q2I0M4 334 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 SLC25A52Q3SY17 297 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 CACHD1Q5VU97 1274 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 TUBA1AQ71U36 451 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 WNT8BQ93098 351 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 VMP1Q96GC9 406 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 MED30Q96HR3 178 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 SPATA33Q96N06 139 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 MBOAT4Q96T53 435 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 CNPPD1Q9BV87 410 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 SLIRPQ9GZT3 109 aaKnown RBP10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 SNTG1Q9NSN8 517 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 TMEM39AQ9NV64 488 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 TAS2R16Q9NYV7 291 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 SARDHQ9UL12 918 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 CLCA3PQ9Y6N3 262 aa10.46□□□□□ -0.73
TRAPPC12-223ENST00000497597 DPYSL4O14531 572 aa10.46□□□□□ -0.74
TRAPPC12-223ENST00000497597 AKR7A2O43488 359 aa10.46□□□□□ -0.74
TRAPPC12-223ENST00000497597 SH3BGRLO75368 114 aa10.46□□□□□ -0.74
TRAPPC12-223ENST00000497597 LRATO95237 230 aa10.46□□□□□ -0.74
TRAPPC12-223ENST00000497597 G6PDP11413 515 aa10.46□□□□□ -0.74
TRAPPC12-223ENST00000497597 POU2F1P14859 743 aa10.46□□□□□ -0.74
TRAPPC12-223ENST00000497597 DCTP40126 519 aa10.46□□□□□ -0.74
TRAPPC12-223ENST00000497597 ARCN1P48444 511 aaKnown RBP10.46□□□□□ -0.74
TRAPPC12-223ENST00000497597 WNT3AP56704 352 aa10.46□□□□□ -0.74
TRAPPC12-223ENST00000497597 RUNX1T1Q06455 604 aa10.46□□□□□ -0.74
TRAPPC12-223ENST00000497597 MRPL28Q13084 256 aaKnown RBP10.46□□□□□ -0.74
TRAPPC12-223ENST00000497597 PTGR1Q14914 329 aa10.46□□□□□ -0.74
TRAPPC12-223ENST00000497597 MAPKAPK3Q16644 382 aa10.46□□□□□ -0.74
TRAPPC12-223ENST00000497597 ZNF181Q2M3W8 571 aa10.46□□□□□ -0.74
TRAPPC12-223ENST00000497597 GRAMD2AQ8IUY3 354 aa10.46□□□□□ -0.74
TRAPPC12-223ENST00000497597 TTC39CQ8N584 583 aa10.46□□□□□ -0.74
TRAPPC12-223ENST00000497597 GALNT6Q8NCL4 622 aa10.46□□□□□ -0.74
TRAPPC12-223ENST00000497597 OR52J3Q8NH60 311 aa10.46□□□□□ -0.74
TRAPPC12-223ENST00000497597 MSANTD3Q96H12 275 aa10.46□□□□□ -0.74
TRAPPC12-223ENST00000497597 KCNC2Q96PR1 638 aa10.46□□□□□ -0.74
TRAPPC12-223ENST00000497597 CLSTN3Q9BQT9 956 aa10.46□□□□□ -0.74
TRAPPC12-223ENST00000497597 TUBB1Q9H4B7 451 aa10.46□□□□□ -0.74
TRAPPC12-223ENST00000497597 MARCH4Q9P2E8 410 aaPredicted RBP10.46□□□□□ -0.74
TRAPPC12-223ENST00000497597 AAR2Q9Y312 384 aaKnown RBP10.46□□□□□ -0.74
TRAPPC12-223ENST00000497597 BTN3A3O00478 584 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 CXCR6O00574 342 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 MAFO75444 373 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 ANXA9O76027 345 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 PTTG1O95997 202 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 OR3A3P47888 321 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 MAPK12P53778 367 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 EEFSECP57772 596 aaKnown RBP10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 ISL1P61371 349 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 NKX3-2P78367 333 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 NKG7Q16617 165 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 FAM174BQ3ZCQ3 159 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 GRPEL2Q8TAA5 225 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 MMP27Q9H306 513 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 C8orf4Q9NR00 106 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 IMPAD1Q9NX62 359 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 MPP6Q9NZW5 540 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 EIF2B4Q9UI10 523 aaKnown RBP10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 IKZF3Q9UKT9 509 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 KIAA1257Q9ULG3 409 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 TCRBV5S2A0A599 114 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 NPEPPSL1A6NEC2 478 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 MOXD2PA6NHM9 499 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 CDK2AP1O14519 115 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 TLR5O60602 858 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 PGK2P07205 417 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 IQCF3P0C7M6 154 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms