RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 FGF3P11487 239 aaPredicted RBP3.86□□□□□ -1.79
SMC4-225ENST00000497203 IFNAR1P17181 557 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 ACHEP22303 614 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 GP5P40197 560 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 TERF1P54274 439 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 ISL1P61371 349 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 RBP5P82980 135 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 RELQ04864 619 aaPredicted RBP3.86□□□□□ -1.79
SMC4-225ENST00000497203 SCARB2Q14108 478 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 SLC39A14Q15043 492 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 SF3B4Q15427 424 aaKnown RBP eCLIP3.86□□□□□ -1.79
SMC4-225ENST00000497203 HYAL4Q2M3T9 481 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 KIF19Q2TAC6 998 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 ASPRV1Q53RT3 343 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 RNASEH2BQ5TBB1 312 aaKnown RBP3.86□□□□□ -1.79
SMC4-225ENST00000497203 IRAK1BP1Q5VVH5 260 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 OR7E24Q6IFN5 339 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 KLC3Q6P597 504 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 GFRALQ6UXV0 394 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 ASB18Q6ZVZ8 466 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 DET1Q7L5Y6 550 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 TMEM219Q86XT9 240 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 ODF3L1Q8IXM7 274 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.86□□□□□ -1.79
SMC4-225ENST00000497203 MUC20Q8N307 709 aaPredicted RBP3.86□□□□□ -1.79
SMC4-225ENST00000497203 GBGT1Q8N5D6 347 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 CAMKVQ8NCB2 501 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 ABHD8Q96I13 439 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 LINC00615Q96LM1 132 aaPredicted RBP3.86□□□□□ -1.79
SMC4-225ENST00000497203 FER1L6-AS2Q96M78 137 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 TTC14Q96N46 770 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 C16orf70Q9BSU1 422 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 ABHD6Q9BV23 337 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 FNDC11Q9BVV2 318 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 GAREM1Q9H706 876 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 MBNL1Q9NR56 388 aaKnown RBP3.86□□□□□ -1.79
SMC4-225ENST00000497203 MIOSQ9NXC5 875 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 WWOXQ9NZC7 414 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.86□□□□□ -1.79
SMC4-225ENST00000497203 KCNS2Q9ULS6 477 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 DLGAP4Q9Y2H0 992 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 OR2W1Q9Y3N9 320 aa3.86□□□□□ -1.79
SMC4-225ENST00000497203 PRSS51A0A1B0GVH4 220 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 ELOVL7A1L3X0 281 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 SRRM3A6NNA2 597 aaPredicted RBP3.85□□□□□ -1.79
SMC4-225ENST00000497203 ZNF587BE7ETH6 402 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 CCDC188H7C350 402 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 LDB3O75112 727 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 PDE9AO76083 593 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 SLCO2B1O94956 709 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 PPP1R3DO95685 299 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 H1F0P07305 194 aaKnown RBP3.85□□□□□ -1.79
SMC4-225ENST00000497203 TGFB3P10600 412 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 GLULP15104 373 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 GM2AP17900 193 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 TCEA1P23193 301 aaKnown RBP3.85□□□□□ -1.79
SMC4-225ENST00000497203 HSPA4P34932 840 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 AHRP35869 848 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 CCR10P46092 362 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 LIMK1P53667 647 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 BRWD1-AS2P59051 145 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 RBPJQ06330 500 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 RUNX1T1Q06455 604 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 KIF5AQ12840 1032 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 BFSP1Q12934 665 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 VWC2Q2TAL6 325 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 CAPRIN2Q6IMN6 1127 aaKnown RBP3.85□□□□□ -1.79
SMC4-225ENST00000497203 PET117Q6UWS5 81 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 UNQ6126/PRO20091Q6UXV3 157 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 PACS1Q6VY07 963 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 ZNF595Q8IYB9 648 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 IQUBQ8NA54 791 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 SMRP1Q8NCR6 262 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 OR2AJ1Q8NGZ0 328 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 LILRB1Q8NHL6 650 aaPredicted RBP3.85□□□□□ -1.79
SMC4-225ENST00000497203 LMO3Q8TAP4 145 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 DEPDC1BQ8WUY9 529 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 ROBO4Q8WZ75 1007 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 SEMA4DQ92854 862 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 FAM162AQ96A26 154 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 SPDL1Q96EA4 605 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 SFXN2Q96NB2 322 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 ZNF582Q96NG8 517 aaPredicted RBP3.85□□□□□ -1.79
SMC4-225ENST00000497203 LRRC3BQ96PB8 259 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 DUX5Q96PT3 197 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 OLFM1Q99784 485 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 LMF2Q9BU23 707 aaKnown RBP3.85□□□□□ -1.79
SMC4-225ENST00000497203 DPAGT1Q9H3H5 408 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 SLA2Q9H6Q3 261 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 EBF2Q9HAK2 575 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 PRMT7Q9NVM4 692 aaPredicted RBP3.85□□□□□ -1.79
SMC4-225ENST00000497203 NPAP1Q9NZP6 1156 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 MALT1Q9UDY8 824 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 CGNL1Q0VF96 1302 aa3.85□□□□□ -1.79
SMC4-225ENST00000497203 IGHV4OR15-8A0A075B7B6 117 aa3.84□□□□□ -1.79
SMC4-225ENST00000497203 SAA2-SAA4A0A096LPE2 208 aa3.84□□□□□ -1.79
SMC4-225ENST00000497203 MEIS2O14770 477 aa3.84□□□□□ -1.79
SMC4-225ENST00000497203 PSMA7O14818 248 aa3.84□□□□□ -1.79
SMC4-225ENST00000497203 SPRY1O43609 319 aaPredicted RBP3.84□□□□□ -1.79
SMC4-225ENST00000497203 TOMM70O94826 608 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms