RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-218	ENST00000496197	SPATA6L	Q8N4H0	392 aa		13.2	□□□□□ -0.3
PTPN7-218	ENST00000496197	KY	Q8NBH2	561 aa		13.2	□□□□□ -0.3
PTPN7-218	ENST00000496197	ZDHHC1	Q8WTX9	485 aa		13.2	□□□□□ -0.3
PTPN7-218	ENST00000496197	GLMN	Q92990	594 aa		13.2	□□□□□ -0.3
PTPN7-218	ENST00000496197	ISL2	Q96A47	359 aa		13.2	□□□□□ -0.3
PTPN7-218	ENST00000496197	INSM2	Q96T92	566 aa	Predicted RBP	13.2	□□□□□ -0.3
PTPN7-218	ENST00000496197	NRTN	Q99748	197 aa		13.2	□□□□□ -0.3
PTPN7-218	ENST00000496197	TSSK1B	Q9BXA7	367 aa		13.2	□□□□□ -0.3
PTPN7-218	ENST00000496197	UNK	Q9C0B0	810 aa	Known RBP	13.2	□□□□□ -0.3
PTPN7-218	ENST00000496197	DPEP2	Q9H4A9	486 aa		13.2	□□□□□ -0.3
PTPN7-218	ENST00000496197	TMEM9B	Q9NQ34	198 aa		13.2	□□□□□ -0.3
PTPN7-218	ENST00000496197	ZNF446	Q9NWS9	450 aa		13.2	□□□□□ -0.3
PTPN7-218	ENST00000496197	ZNF624	Q9P2J8	865 aa	Predicted RBP	13.2	□□□□□ -0.3
PTPN7-218	ENST00000496197	TRMT6	Q9UJA5	497 aa	Known RBP	13.2	□□□□□ -0.3
PTPN7-218	ENST00000496197	PCOLCE2	Q9UKZ9	415 aa		13.2	□□□□□ -0.3
PTPN7-218	ENST00000496197	IKBKG	Q9Y6K9	419 aa		13.2	□□□□□ -0.3
PTPN7-218	ENST00000496197		U3KQA8	63 aa		13.2	□□□□□ -0.3
PTPN7-218	ENST00000496197	SPEG	Q15772	3267 aa		13.19	□□□□□ -0.3
PTPN7-218	ENST00000496197	PDZK1P1	A8MUH7	402 aa		13.19	□□□□□ -0.3
PTPN7-218	ENST00000496197	RASGRF2	O14827	1237 aa		13.19	□□□□□ -0.3
PTPN7-218	ENST00000496197	YKT6	O15498	198 aa		13.19	□□□□□ -0.3
PTPN7-218	ENST00000496197	KCNJ13	O60928	360 aa		13.19	□□□□□ -0.3
PTPN7-218	ENST00000496197	RFPL1	O75677	317 aa		13.19	□□□□□ -0.3
PTPN7-218	ENST00000496197	SASH3	O75995	380 aa		13.19	□□□□□ -0.3
PTPN7-218	ENST00000496197	APOA4	P06727	396 aa		13.19	□□□□□ -0.3
PTPN7-218	ENST00000496197	ANXA6	P08133	673 aa		13.19	□□□□□ -0.3
PTPN7-218	ENST00000496197	GSTM1	P09488	218 aa		13.19	□□□□□ -0.3
PTPN7-218	ENST00000496197	F3	P13726	295 aa		13.19	□□□□□ -0.3
PTPN7-218	ENST00000496197	STMN1	P16949	149 aa		13.19	□□□□□ -0.3
PTPN7-218	ENST00000496197	VCL	P18206	1134 aa		13.19	□□□□□ -0.3
PTPN7-218	ENST00000496197	IDS	P22304	550 aa		13.19	□□□□□ -0.3
PTPN7-218	ENST00000496197	ACADL	P28330	430 aa		13.19	□□□□□ -0.3
PTPN7-218	ENST00000496197	SERPINB9	P50453	376 aa		13.19	□□□□□ -0.3
PTPN7-218	ENST00000496197	MAZ	P56270	477 aa	Known RBP	13.19	□□□□□ -0.3
PTPN7-218	ENST00000496197	RAB10	P61026	200 aa		13.19	□□□□□ -0.3
PTPN7-218	ENST00000496197	GSTM4	Q03013	218 aa		13.19	□□□□□ -0.3
PTPN7-218	ENST00000496197	IFFO1	Q0D2I5	559 aa		13.19	□□□□□ -0.3
PTPN7-218	ENST00000496197	UAP1L1	Q3KQV9	507 aa		13.19	□□□□□ -0.3
PTPN7-218	ENST00000496197	C6orf132	Q5T0Z8	1188 aa		13.19	□□□□□ -0.3
PTPN7-218	ENST00000496197	IYD	Q6PHW0	289 aa		13.19	□□□□□ -0.3
PTPN7-218	ENST00000496197	ABRAXAS1	Q6UWZ7	409 aa		13.19	□□□□□ -0.3
PTPN7-218	ENST00000496197	SLC35F3	Q8IY50	421 aa		13.19	□□□□□ -0.3
PTPN7-218	ENST00000496197	EID2	Q8N6I1	236 aa		13.19	□□□□□ -0.3
PTPN7-218	ENST00000496197	OR4C6	Q8NH72	309 aa		13.19	□□□□□ -0.3
PTPN7-218	ENST00000496197	SLC37A2	Q8TED4	501 aa		13.19	□□□□□ -0.3
PTPN7-218	ENST00000496197	ASZ1	Q8WWH4	475 aa		13.19	□□□□□ -0.3
PTPN7-218	ENST00000496197	ANKRD7	Q92527	254 aa		13.19	□□□□□ -0.3
PTPN7-218	ENST00000496197	INPP5D	Q92835	1189 aa		13.19	□□□□□ -0.3
PTPN7-218	ENST00000496197	TMEM159	Q96B96	161 aa		13.19	□□□□□ -0.3
PTPN7-218	ENST00000496197	CAMK1G	Q96NX5	476 aa		13.19	□□□□□ -0.3
PTPN7-218	ENST00000496197	CCDC77	Q9BR77	488 aa		13.19	□□□□□ -0.3
PTPN7-218	ENST00000496197	TMEM109	Q9BVC6	243 aa		13.19	□□□□□ -0.3
PTPN7-218	ENST00000496197	GPAM	Q9HCL2	828 aa		13.19	□□□□□ -0.3
PTPN7-218	ENST00000496197	ARGLU1	Q9NWB6	273 aa	Predicted RBP	13.19	□□□□□ -0.3
PTPN7-218	ENST00000496197	NLGN3	Q9NZ94	848 aa		13.19	□□□□□ -0.3
PTPN7-218	ENST00000496197	DOLK	Q9UPQ8	538 aa		13.19	□□□□□ -0.3
PTPN7-218	ENST00000496197	KLHL33	A6NCF5	533 aa		13.18	□□□□□ -0.3
PTPN7-218	ENST00000496197	AGPS	O00116	658 aa		13.18	□□□□□ -0.3
PTPN7-218	ENST00000496197	CASC3	O15234	703 aa	Known RBP	13.18	□□□□□ -0.3
PTPN7-218	ENST00000496197	SIGLEC6	O43699	453 aa		13.18	□□□□□ -0.3
PTPN7-218	ENST00000496197	GFRA3	O60609	400 aa		13.18	□□□□□ -0.3
PTPN7-218	ENST00000496197	CDH16	O75309	829 aa		13.18	□□□□□ -0.3
PTPN7-218	ENST00000496197	KRT38	O76015	456 aa		13.18	□□□□□ -0.3
PTPN7-218	ENST00000496197	C2	P06681	752 aa		13.18	□□□□□ -0.3
PTPN7-218	ENST00000496197	SNRPA	P09012	282 aa	Known RBP	13.18	□□□□□ -0.3
PTPN7-218	ENST00000496197	SLC19A1	P41440	591 aa		13.18	□□□□□ -0.3
PTPN7-218	ENST00000496197	RPA4	Q13156	261 aa		13.18	□□□□□ -0.3
PTPN7-218	ENST00000496197	RASA2	Q15283	850 aa		13.18	□□□□□ -0.3
PTPN7-218	ENST00000496197	RPE65	Q16518	533 aa		13.18	□□□□□ -0.3
PTPN7-218	ENST00000496197	AGAP9	Q5VTM2	703 aa		13.18	□□□□□ -0.3
PTPN7-218	ENST00000496197	OGFOD3	Q6PK18	319 aa		13.18	□□□□□ -0.3
PTPN7-218	ENST00000496197	WASH2P	Q6VEQ5	465 aa		13.18	□□□□□ -0.3
PTPN7-218	ENST00000496197	PDZD3	Q86UT5	571 aa		13.18	□□□□□ -0.3
PTPN7-218	ENST00000496197	C17orf82	Q86X59	251 aa	Predicted RBP	13.18	□□□□□ -0.3
PTPN7-218	ENST00000496197	CENPL	Q8N0S6	344 aa	Predicted RBP	13.18	□□□□□ -0.3
PTPN7-218	ENST00000496197	PLD6	Q8N2A8	252 aa	Known RBP	13.18	□□□□□ -0.3
PTPN7-218	ENST00000496197	SFRP1	Q8N474	314 aa		13.18	□□□□□ -0.3
PTPN7-218	ENST00000496197	PHC3	Q8NDX5	983 aa		13.18	□□□□□ -0.3
PTPN7-218	ENST00000496197	GPR156	Q8NFN8	814 aa		13.18	□□□□□ -0.3
PTPN7-218	ENST00000496197	LINGO1	Q96FE5	620 aa		13.18	□□□□□ -0.3
PTPN7-218	ENST00000496197	C12orf66	Q96MD2	445 aa		13.18	□□□□□ -0.3
PTPN7-218	ENST00000496197	WASH6P	Q9NQA3	447 aa		13.18	□□□□□ -0.3
PTPN7-218	ENST00000496197	KLHL42	Q9P2K6	505 aa		13.18	□□□□□ -0.3
PTPN7-218	ENST00000496197	LGALS13	Q9UHV8	139 aa		13.18	□□□□□ -0.3
PTPN7-218	ENST00000496197	ADAMTS6	Q9UKP5	1117 aa		13.18	□□□□□ -0.3
PTPN7-218	ENST00000496197	ACSL5	Q9ULC5	683 aa		13.18	□□□□□ -0.3
PTPN7-218	ENST00000496197	COL27A1	Q8IZC6	1860 aa	Predicted RBP	13.18	□□□□□ -0.3
PTPN7-218	ENST00000496197	EP300	Q09472	2414 aa	Predicted RBP	13.18	□□□□□ -0.3
PTPN7-218	ENST00000496197	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	13.17	□□□□□ -0.3
PTPN7-218	ENST00000496197		F8W8V4	182 aa		13.17	□□□□□ -0.3
PTPN7-218	ENST00000496197	GOLGA8R	I6L899	631 aa		13.17	□□□□□ -0.3
PTPN7-218	ENST00000496197	KPNA5	O15131	536 aa		13.17	□□□□□ -0.3
PTPN7-218	ENST00000496197	SLC35G4	P0C7Q5	338 aa		13.17	□□□□□ -0.3
PTPN7-218	ENST00000496197	CNTF	P26441	200 aa		13.17	□□□□□ -0.3
PTPN7-218	ENST00000496197	SKIV2L2	P42285	1042 aa	Known RBP	13.17	□□□□□ -0.3
PTPN7-218	ENST00000496197	SERPINB8	P50452	374 aa		13.17	□□□□□ -0.3
PTPN7-218	ENST00000496197	SLC12A2	P55011	1212 aa		13.17	□□□□□ -0.3
PTPN7-218	ENST00000496197	ABR	Q12979	859 aa		13.17	□□□□□ -0.3
PTPN7-218	ENST00000496197	KRT71	Q3SY84	523 aa		13.17	□□□□□ -0.3
PTPN7-218	ENST00000496197	CCSMST1	Q4G0I0	132 aa		13.17	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms