RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 PHACTR1Q9C0D0 580 aa18.99■□□□□ 0.63
HDAC4-212ENST00000495497 SLC40A1Q9NP59 571 aa18.99■□□□□ 0.63
HDAC4-212ENST00000495497 SMYD2Q9NRG4 433 aa18.99■□□□□ 0.63
HDAC4-212ENST00000495497 POT1Q9NUX5 634 aa18.99■□□□□ 0.63
HDAC4-212ENST00000495497 CDYLQ9Y232 598 aa18.99■□□□□ 0.63
HDAC4-212ENST00000495497 VPS9D1Q9Y2B5 631 aa18.99■□□□□ 0.63
HDAC4-212ENST00000495497 IGHV1OR21-1A0A087WYE8 117 aa18.98■□□□□ 0.63
HDAC4-212ENST00000495497 GPC4O75487 556 aa18.98■□□□□ 0.63
HDAC4-212ENST00000495497 JUPP14923 745 aa18.98■□□□□ 0.63
HDAC4-212ENST00000495497 CHRM3P20309 590 aa18.98■□□□□ 0.63
HDAC4-212ENST00000495497 CD1CP29017 333 aa18.98■□□□□ 0.63
HDAC4-212ENST00000495497 GPR3P46089 330 aa18.98■□□□□ 0.63
HDAC4-212ENST00000495497 PPM1FP49593 454 aaPredicted RBP18.98■□□□□ 0.63
HDAC4-212ENST00000495497 MGAT5Q09328 741 aa18.98■□□□□ 0.63
HDAC4-212ENST00000495497 RPA4Q13156 261 aa18.98■□□□□ 0.63
HDAC4-212ENST00000495497 SPIDRQ14159 915 aa18.98■□□□□ 0.63
HDAC4-212ENST00000495497 GPR18Q14330 331 aa18.98■□□□□ 0.63
HDAC4-212ENST00000495497 UBAP2Q5T6F2 1119 aaKnown RBP18.98■□□□□ 0.63
HDAC4-212ENST00000495497 ZNF449Q6P9G9 518 aa18.98■□□□□ 0.63
HDAC4-212ENST00000495497 C3orf62Q6ZUJ4 267 aa18.98■□□□□ 0.63
HDAC4-212ENST00000495497 TMEM26Q6ZUK4 368 aa18.98■□□□□ 0.63
HDAC4-212ENST00000495497 TMEM159Q96B96 161 aa18.98■□□□□ 0.63
HDAC4-212ENST00000495497 SH3KBP1Q96B97 665 aa18.98■□□□□ 0.63
HDAC4-212ENST00000495497 NDNQ99608 321 aa18.98■□□□□ 0.63
HDAC4-212ENST00000495497 SLC30A3Q99726 388 aa18.98■□□□□ 0.63
HDAC4-212ENST00000495497 RDH14Q9HBH5 336 aa18.98■□□□□ 0.63
HDAC4-212ENST00000495497 LRRC4CQ9HCJ2 640 aa18.98■□□□□ 0.63
HDAC4-212ENST00000495497 MTRF1LQ9UGC7 380 aaKnown RBP18.98■□□□□ 0.63
HDAC4-212ENST00000495497 TSR3Q9UJK0 312 aaKnown RBP18.98■□□□□ 0.63
HDAC4-212ENST00000495497 MED16Q9Y2X0 877 aa18.98■□□□□ 0.63
HDAC4-212ENST00000495497 PSAT1Q9Y617 370 aa18.98■□□□□ 0.63
HDAC4-212ENST00000495497 CXorf49A8MYA2 514 aaPredicted RBP18.97■□□□□ 0.63
HDAC4-212ENST00000495497 H3BMM5 538 aa18.97■□□□□ 0.63
HDAC4-212ENST00000495497 IFRD1O00458 451 aaPredicted RBP18.97■□□□□ 0.63
HDAC4-212ENST00000495497 CFHR1Q03591 330 aa18.97■□□□□ 0.63
HDAC4-212ENST00000495497 TARDBPQ13148 414 aaKnown RBP eCLIP18.97■□□□□ 0.63
HDAC4-212ENST00000495497 PDZD3Q86UT5 571 aa18.97■□□□□ 0.63
HDAC4-212ENST00000495497 TMPRSS12Q86WS5 348 aa18.97■□□□□ 0.63
HDAC4-212ENST00000495497 IFT20Q8IY31 132 aa18.97■□□□□ 0.63
HDAC4-212ENST00000495497 AVL9Q8NBF6 648 aa18.97■□□□□ 0.63
HDAC4-212ENST00000495497 GABPB2Q8TAK5 448 aaPredicted RBP18.97■□□□□ 0.63
HDAC4-212ENST00000495497 FERD3LQ96RJ6 166 aa18.97■□□□□ 0.63
HDAC4-212ENST00000495497 NRTNQ99748 197 aa18.97■□□□□ 0.63
HDAC4-212ENST00000495497 NUDT22Q9BRQ3 303 aa18.97■□□□□ 0.63
HDAC4-212ENST00000495497 AARSD1Q9BTE6 412 aaKnown RBP18.97■□□□□ 0.63
HDAC4-212ENST00000495497 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.97■□□□□ 0.63
HDAC4-212ENST00000495497 CCDC68Q9H2F9 335 aa18.97■□□□□ 0.63
HDAC4-212ENST00000495497 ZFATQ9P243 1243 aa18.97■□□□□ 0.63
HDAC4-212ENST00000495497 NFU1Q9UMS0 254 aa18.97■□□□□ 0.63
HDAC4-212ENST00000495497 CLCA2Q9UQC9 943 aa18.97■□□□□ 0.63
HDAC4-212ENST00000495497 RP1P56715 2156 aa18.97■□□□□ 0.63
HDAC4-212ENST00000495497 TCRBV9S1A1TA0A576 114 aa18.96■□□□□ 0.63
HDAC4-212ENST00000495497 E5RI56 91 aa18.96■□□□□ 0.63
HDAC4-212ENST00000495497 APOA4P06727 396 aa18.96■□□□□ 0.63
HDAC4-212ENST00000495497 ACADLP28330 430 aa18.96■□□□□ 0.63
HDAC4-212ENST00000495497 CD151P48509 253 aa18.96■□□□□ 0.63
HDAC4-212ENST00000495497 PDX1P52945 283 aa18.96■□□□□ 0.63
HDAC4-212ENST00000495497 ABRQ12979 859 aa18.96■□□□□ 0.63
HDAC4-212ENST00000495497 KRT33BQ14525 404 aa18.96■□□□□ 0.63
HDAC4-212ENST00000495497 TMED2Q15363 201 aa18.96■□□□□ 0.63
HDAC4-212ENST00000495497 KYNUQ16719 465 aa18.96■□□□□ 0.63
HDAC4-212ENST00000495497 RBM20Q5T481 1227 aaKnown RBP18.96■□□□□ 0.63
HDAC4-212ENST00000495497 RBM44Q6ZP01 1051 aaKnown RBP18.96■□□□□ 0.63
HDAC4-212ENST00000495497 KIAA0408Q6ZU52 694 aa18.96■□□□□ 0.63
HDAC4-212ENST00000495497 OTOAQ7RTW8 1153 aa18.96■□□□□ 0.63
HDAC4-212ENST00000495497 B3GNT8Q7Z7M8 397 aa18.96■□□□□ 0.63
HDAC4-212ENST00000495497 SLC22A15Q8IZD6 547 aa18.96■□□□□ 0.63
HDAC4-212ENST00000495497 GALNT15Q8N3T1 639 aa18.96■□□□□ 0.63
HDAC4-212ENST00000495497 SIDT2Q8NBJ9 832 aaKnown RBP18.96■□□□□ 0.63
HDAC4-212ENST00000495497 ASZ1Q8WWH4 475 aa18.96■□□□□ 0.63
HDAC4-212ENST00000495497 TFGQ92734 400 aaPredicted RBP18.96■□□□□ 0.63
HDAC4-212ENST00000495497 ATXN7L3BQ96GX2 97 aa18.96■□□□□ 0.63
HDAC4-212ENST00000495497 AHCYL2Q96HN2 611 aaKnown RBP18.96■□□□□ 0.63
HDAC4-212ENST00000495497 FMO2Q99518 471 aa18.96■□□□□ 0.63
HDAC4-212ENST00000495497 FAM129AQ9BZQ8 928 aa18.96■□□□□ 0.63
HDAC4-212ENST00000495497 TMEM9Q9P0T7 183 aa18.96■□□□□ 0.63
HDAC4-212ENST00000495497 LILRA5A6NI73 299 aa18.95■□□□□ 0.62
HDAC4-212ENST00000495497 D6RAR5 112 aa18.95■□□□□ 0.62
HDAC4-212ENST00000495497 AGRPO00253 132 aa18.95■□□□□ 0.62
HDAC4-212ENST00000495497 CSO75390 466 aaKnown RBP18.95■□□□□ 0.62
HDAC4-212ENST00000495497 C1QAP02745 245 aa18.95■□□□□ 0.62
HDAC4-212ENST00000495497 HOXB3P14651 431 aaPredicted RBP18.95■□□□□ 0.62
HDAC4-212ENST00000495497 TYRP1P17643 537 aa18.95■□□□□ 0.62
HDAC4-212ENST00000495497 MPSTP25325 297 aa18.95■□□□□ 0.62
HDAC4-212ENST00000495497 CSF2RBP32927 897 aa18.95■□□□□ 0.62
HDAC4-212ENST00000495497 CLCN7P51798 805 aa18.95■□□□□ 0.62
HDAC4-212ENST00000495497 PGGT1BP53609 377 aa18.95■□□□□ 0.62
HDAC4-212ENST00000495497 TIAL1Q01085 375 aaKnown RBP eCLIP18.95■□□□□ 0.62
HDAC4-212ENST00000495497 PLOD1Q02809 727 aaPredicted RBP18.95■□□□□ 0.62
HDAC4-212ENST00000495497 PRKG2Q13237 762 aa18.95■□□□□ 0.62
HDAC4-212ENST00000495497 CUL1Q13616 776 aa18.95■□□□□ 0.62
HDAC4-212ENST00000495497 ZNF574Q6ZN55 896 aaPredicted RBP18.95■□□□□ 0.62
HDAC4-212ENST00000495497 STRA8Q7Z7C7 330 aa18.95■□□□□ 0.62
HDAC4-212ENST00000495497 RBM12BQ8IXT5 1001 aaKnown RBP18.95■□□□□ 0.62
HDAC4-212ENST00000495497 ZBTB2Q8N680 514 aa18.95■□□□□ 0.62
HDAC4-212ENST00000495497 DCBLD1Q8N8Z6 715 aa18.95■□□□□ 0.62
HDAC4-212ENST00000495497 OR5AR1Q8NGP9 310 aa18.95■□□□□ 0.62
HDAC4-212ENST00000495497 OR10G6Q8NH81 332 aa18.95■□□□□ 0.62
HDAC4-212ENST00000495497 CFAP61Q8NHU2 1237 aa18.95■□□□□ 0.62
HDAC4-212ENST00000495497 GIMAP7Q8NHV1 300 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms