RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 SUCLA2Q9P2R7 463 aaPredicted RBP4.73□□□□□ -1.65
NCL-210ENST00000494618 STK36Q9NRP7 1315 aa4.72□□□□□ -1.65
NCL-210ENST00000494618 IGKV3D-15A0A087WSY6 115 aa4.72□□□□□ -1.65
NCL-210ENST00000494618 PRSS51A0A1B0GVH4 220 aa4.72□□□□□ -1.65
NCL-210ENST00000494618 NR5A2O00482 541 aa4.72□□□□□ -1.65
NCL-210ENST00000494618 TO15178 435 aa4.72□□□□□ -1.65
NCL-210ENST00000494618 SLC22A2O15244 555 aa4.72□□□□□ -1.65
NCL-210ENST00000494618 DOK2O60496 412 aa4.72□□□□□ -1.65
NCL-210ENST00000494618 EDN1P05305 212 aa4.72□□□□□ -1.65
NCL-210ENST00000494618 GEMIN4P57678 1058 aaKnown RBP4.72□□□□□ -1.65
NCL-210ENST00000494618 MC1RQ01726 317 aa4.72□□□□□ -1.65
NCL-210ENST00000494618 FCN2Q15485 313 aa4.72□□□□□ -1.65
NCL-210ENST00000494618 TMCO3Q6UWJ1 677 aa4.72□□□□□ -1.65
NCL-210ENST00000494618 DNAJC22Q8N4W6 341 aa4.72□□□□□ -1.65
NCL-210ENST00000494618 ERLEC1Q96DZ1 483 aa4.72□□□□□ -1.65
NCL-210ENST00000494618 FAM120BQ96EK7 910 aaKnown RBP4.72□□□□□ -1.65
NCL-210ENST00000494618 MYADMQ96S97 322 aa4.72□□□□□ -1.65
NCL-210ENST00000494618 RTP3Q9BQQ7 232 aa4.72□□□□□ -1.65
NCL-210ENST00000494618 ABHD6Q9BV23 337 aa4.72□□□□□ -1.65
NCL-210ENST00000494618 KCNK15Q9H427 330 aa4.72□□□□□ -1.65
NCL-210ENST00000494618 OSGEPL1Q9H4B0 414 aa4.72□□□□□ -1.65
NCL-210ENST00000494618 HAUS2Q9NVX0 235 aa4.72□□□□□ -1.65
NCL-210ENST00000494618 LARSQ9P2J5 1176 aaKnown RBP4.72□□□□□ -1.65
NCL-210ENST00000494618 HACL1Q9UJ83 578 aa4.72□□□□□ -1.65
NCL-210ENST00000494618 ASTN2O75129 1339 aaPredicted RBP4.72□□□□□ -1.65
NCL-210ENST00000494618 A0A1W2PRB8 838 aa4.71□□□□□ -1.66
NCL-210ENST00000494618 LNP1A1A4G5 178 aa4.71□□□□□ -1.66
NCL-210ENST00000494618 FSD2A1L4K1 749 aa4.71□□□□□ -1.66
NCL-210ENST00000494618 A6NCN8 305 aa4.71□□□□□ -1.66
NCL-210ENST00000494618 SH2B2O14492 632 aaPredicted RBP4.71□□□□□ -1.66
NCL-210ENST00000494618 CTDSP2O14595 271 aa4.71□□□□□ -1.66
NCL-210ENST00000494618 WDHD1O75717 1129 aaPredicted RBP4.71□□□□□ -1.66
NCL-210ENST00000494618 TSPAN9O75954 239 aa4.71□□□□□ -1.66
NCL-210ENST00000494618 ACP2P11117 423 aa4.71□□□□□ -1.66
NCL-210ENST00000494618 CEACAM8P31997 349 aaPredicted RBP4.71□□□□□ -1.66
NCL-210ENST00000494618 CREB5Q02930 508 aa4.71□□□□□ -1.66
NCL-210ENST00000494618 CXCL9Q07325 125 aa4.71□□□□□ -1.66
NCL-210ENST00000494618 CORO6Q6QEF8 472 aa4.71□□□□□ -1.66
NCL-210ENST00000494618 NOTCH2NLQ7Z3S9 236 aa4.71□□□□□ -1.66
NCL-210ENST00000494618 OR6C1Q96RD1 312 aa4.71□□□□□ -1.66
NCL-210ENST00000494618 TRAF4Q9BUZ4 470 aaPredicted RBP4.71□□□□□ -1.66
NCL-210ENST00000494618 SPATC1LQ9H0A9 340 aa4.71□□□□□ -1.66
NCL-210ENST00000494618 PSD3Q9NYI0 1048 aa4.71□□□□□ -1.66
NCL-210ENST00000494618 ZNF148Q9UQR1 794 aa4.71□□□□□ -1.66
NCL-210ENST00000494618 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.71□□□□□ -1.665e-23■■■■■ 46.9
NCL-210ENST00000494618 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.7□□□□□ -1.66
NCL-210ENST00000494618 IGLV9-49A0A0B4J1Y8 123 aa4.7□□□□□ -1.66
NCL-210ENST00000494618 PRAMEF11O60813 436 aa4.7□□□□□ -1.66
NCL-210ENST00000494618 ZNF883P0CG24 379 aa4.7□□□□□ -1.66
NCL-210ENST00000494618 CEACAM1P13688 526 aa4.7□□□□□ -1.66
NCL-210ENST00000494618 ZNF26P17031 533 aaPredicted RBP4.7□□□□□ -1.66
NCL-210ENST00000494618 PNLIPRP2P54317 469 aa4.7□□□□□ -1.66
NCL-210ENST00000494618 SIRPAP78324 504 aa4.7□□□□□ -1.66
NCL-210ENST00000494618 LGALS3BPQ08380 585 aa4.7□□□□□ -1.66
NCL-210ENST00000494618 TAF13Q15543 124 aa4.7□□□□□ -1.66
NCL-210ENST00000494618 GTDC1Q4AE62 458 aa4.7□□□□□ -1.66
NCL-210ENST00000494618 DUSP28Q4G0W2 176 aa4.7□□□□□ -1.66
NCL-210ENST00000494618 MDH1BQ5I0G3 518 aa4.7□□□□□ -1.66
NCL-210ENST00000494618 ZC2HC1BQ5TFG8 222 aa4.7□□□□□ -1.66
NCL-210ENST00000494618 ARHGEF16Q5VV41 709 aa4.7□□□□□ -1.66
NCL-210ENST00000494618 LINGO4Q6UY18 593 aa4.7□□□□□ -1.66
NCL-210ENST00000494618 HAUS6Q7Z4H7 955 aa4.7□□□□□ -1.66
NCL-210ENST00000494618 C17orf53Q8N3J3 647 aaPredicted RBP4.7□□□□□ -1.66
NCL-210ENST00000494618 CPSF7Q8N684 471 aaKnown RBP4.7□□□□□ -1.66
NCL-210ENST00000494618 PAPD5Q8NDF8 572 aaKnown RBP4.7□□□□□ -1.66
NCL-210ENST00000494618 GIMAP5Q96F15 307 aa4.7□□□□□ -1.66
NCL-210ENST00000494618 NEK1Q96PY6 1258 aa4.7□□□□□ -1.66
NCL-210ENST00000494618 GFRA4Q9GZZ7 299 aa4.7□□□□□ -1.66
NCL-210ENST00000494618 ACKR4Q9NPB9 350 aa4.7□□□□□ -1.66
NCL-210ENST00000494618 FLRT3Q9NZU0 649 aa4.7□□□□□ -1.66
NCL-210ENST00000494618 PLAGL1Q9UM63 463 aa4.7□□□□□ -1.66
NCL-210ENST00000494618 SNED1Q8TER0 1413 aa4.7□□□□□ -1.66
NCL-210ENST00000494618 A0A1W2PQ09 198 aa4.69□□□□□ -1.66
NCL-210ENST00000494618 SLCO1B7G3V0H7 640 aa4.69□□□□□ -1.66
NCL-210ENST00000494618 SH3BP5O60239 455 aa4.69□□□□□ -1.66
NCL-210ENST00000494618 AVILO75366 819 aa4.69□□□□□ -1.66
NCL-210ENST00000494618 PIGNO95427 931 aa4.69□□□□□ -1.66
NCL-210ENST00000494618 HMBSP08397 361 aa4.69□□□□□ -1.66
NCL-210ENST00000494618 GJA1P17302 382 aa4.69□□□□□ -1.66
NCL-210ENST00000494618 GCH1P30793 250 aa4.69□□□□□ -1.66
NCL-210ENST00000494618 TUBB2AQ13885 445 aa4.69□□□□□ -1.66
NCL-210ENST00000494618 NR1D2Q14995 579 aa4.69□□□□□ -1.66
NCL-210ENST00000494618 ZFP69Q49AA0 526 aa4.69□□□□□ -1.66
NCL-210ENST00000494618 FFAR4Q5NUL3 377 aa4.69□□□□□ -1.66
NCL-210ENST00000494618 ZNF772Q68DY9 489 aaPredicted RBP4.69□□□□□ -1.66
NCL-210ENST00000494618 DHRS7BQ6IAN0 325 aaPredicted RBP4.69□□□□□ -1.66
NCL-210ENST00000494618 SZRD1Q7Z422 152 aa4.69□□□□□ -1.66
NCL-210ENST00000494618 LDB1Q86U70 411 aaPredicted RBP4.69□□□□□ -1.66
NCL-210ENST00000494618 POC5Q8NA72 575 aa4.69□□□□□ -1.66
NCL-210ENST00000494618 MCUQ8NE86 351 aa4.69□□□□□ -1.66
NCL-210ENST00000494618 OR1J1Q8NGS3 322 aa4.69□□□□□ -1.66
NCL-210ENST00000494618 HSD17B8Q92506 261 aa4.69□□□□□ -1.66
NCL-210ENST00000494618 ART5Q96L15 291 aa4.69□□□□□ -1.66
NCL-210ENST00000494618 SDF4Q9BRK5 362 aa4.69□□□□□ -1.66
NCL-210ENST00000494618 TUBB2BQ9BVA1 445 aa4.69□□□□□ -1.66
NCL-210ENST00000494618 KIFC3Q9BVG8 833 aa4.69□□□□□ -1.66
NCL-210ENST00000494618 PPIL3Q9H2H8 161 aaKnown RBP4.69□□□□□ -1.66
NCL-210ENST00000494618 FGF22Q9HCT0 170 aa4.69□□□□□ -1.66
NCL-210ENST00000494618 TBC1D22BQ9NU19 505 aa4.69□□□□□ -1.66
NCL-210ENST00000494618 BLOC1S4Q9NUP1 217 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms