RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 PACS1Q6VY07 963 aa32.37■■■□□ 2.77
CBX4-203ENST00000494546 NLGN4XQ8N0W4 816 aa32.37■■■□□ 2.77
CBX4-203ENST00000494546 NLGN4YQ8NFZ3 816 aaPredicted RBP32.37■■■□□ 2.77
CBX4-203ENST00000494546 UBXN4Q92575 508 aa32.37■■■□□ 2.77
CBX4-203ENST00000494546 TTC1Q99614 292 aa32.37■■■□□ 2.77
CBX4-203ENST00000494546 MAP3K3Q99759 626 aa32.37■■■□□ 2.77
CBX4-203ENST00000494546 JRKLQ9Y4A0 524 aa32.37■■■□□ 2.77
CBX4-203ENST00000494546 IGHV5-51A0A0C4DH38 117 aa32.36■■■□□ 2.77
CBX4-203ENST00000494546 QSOX1O00391 747 aa32.36■■■□□ 2.77
CBX4-203ENST00000494546 GSTM1P09488 218 aa32.36■■■□□ 2.77
CBX4-203ENST00000494546 LIFP15018 202 aa32.36■■■□□ 2.77
CBX4-203ENST00000494546 NELFEP18615 380 aaKnown RBP32.36■■■□□ 2.77
CBX4-203ENST00000494546 ARCN1P48444 511 aaKnown RBP32.36■■■□□ 2.77
CBX4-203ENST00000494546 GSTM4Q03013 218 aa32.36■■■□□ 2.77
CBX4-203ENST00000494546 ACVR1Q04771 509 aa32.36■■■□□ 2.77
CBX4-203ENST00000494546 RPA4Q13156 261 aa32.36■■■□□ 2.77
CBX4-203ENST00000494546 LYPLAL1Q5VWZ2 237 aa32.36■■■□□ 2.77
CBX4-203ENST00000494546 OR4E2Q8NGC2 313 aa32.36■■■□□ 2.77
CBX4-203ENST00000494546 OR4L1Q8NH43 312 aa32.36■■■□□ 2.77
CBX4-203ENST00000494546 CHRAC1Q9NRG0 131 aa32.36■■■□□ 2.77
CBX4-203ENST00000494546 UBA6A0AVT1 1052 aaPredicted RBP32.35■■■□□ 2.77
CBX4-203ENST00000494546 FTH1P02794 183 aa32.35■■■□□ 2.77
CBX4-203ENST00000494546 MAP4P27816 1152 aaKnown RBP32.35■■■□□ 2.77
CBX4-203ENST00000494546 CRADDP78560 199 aa32.35■■■□□ 2.77
CBX4-203ENST00000494546 COL9A2Q14055 689 aaPredicted RBP32.35■■■□□ 2.77
CBX4-203ENST00000494546 TRIP13Q15645 432 aaPredicted RBP32.35■■■□□ 2.77
CBX4-203ENST00000494546 FASTKD1Q53R41 847 aaKnown RBP32.35■■■□□ 2.77
CBX4-203ENST00000494546 PCID2Q5JVF3 399 aa32.35■■■□□ 2.77
CBX4-203ENST00000494546 TIPARPQ7Z3E1 657 aaKnown RBP32.35■■■□□ 2.77
CBX4-203ENST00000494546 ACVR1CQ8NER5 493 aa32.35■■■□□ 2.77
CBX4-203ENST00000494546 ELMO1Q92556 727 aa32.35■■■□□ 2.77
CBX4-203ENST00000494546 WBP1Q96G27 269 aa32.35■■■□□ 2.77
CBX4-203ENST00000494546 ULBP3Q9BZM4 244 aa32.35■■■□□ 2.77
CBX4-203ENST00000494546 TMEM184BQ9Y519 407 aaPredicted RBP32.35■■■□□ 2.77
CBX4-203ENST00000494546 OR1I1O60431 355 aa32.34■■■□□ 2.77
CBX4-203ENST00000494546 CD151P48509 253 aa32.34■■■□□ 2.77
CBX4-203ENST00000494546 TERF1P54274 439 aa32.34■■■□□ 2.77
CBX4-203ENST00000494546 CYP4F2P78329 520 aa32.34■■■□□ 2.77
CBX4-203ENST00000494546 IL11RAQ14626 422 aa32.34■■■□□ 2.77
CBX4-203ENST00000494546 BRD3Q15059 726 aa32.34■■■□□ 2.77
CBX4-203ENST00000494546 ZNF534Q76KX8 674 aa32.34■■■□□ 2.77
CBX4-203ENST00000494546 RASGRP3Q8IV61 690 aa32.34■■■□□ 2.77
CBX4-203ENST00000494546 SIDT2Q8NBJ9 832 aaKnown RBP32.34■■■□□ 2.77
CBX4-203ENST00000494546 PHC3Q8NDX5 983 aa32.34■■■□□ 2.77
CBX4-203ENST00000494546 LCN9Q8WX39 176 aa32.34■■■□□ 2.77
CBX4-203ENST00000494546 PEX13Q92968 403 aa32.34■■■□□ 2.77
CBX4-203ENST00000494546 MS4A14Q96JA4 679 aa32.34■■■□□ 2.77
CBX4-203ENST00000494546 CD180Q99467 661 aa32.34■■■□□ 2.77
CBX4-203ENST00000494546 SEMA5BQ9P283 1151 aa32.34■■■□□ 2.77
CBX4-203ENST00000494546 TTC7AQ9ULT0 858 aaPredicted RBP32.34■■■□□ 2.77
CBX4-203ENST00000494546 TLCD2A6NGC4 264 aa32.33■■■□□ 2.77
CBX4-203ENST00000494546 LIN7AO14910 233 aaPredicted RBP32.33■■■□□ 2.77
CBX4-203ENST00000494546 OR56A5P0C7T3 313 aa32.33■■■□□ 2.77
CBX4-203ENST00000494546 POLR2CP19387 275 aaPredicted RBP32.33■■■□□ 2.77
CBX4-203ENST00000494546 ARL4DP49703 201 aa32.33■■■□□ 2.77
CBX4-203ENST00000494546 LY6DQ14210 128 aa32.33■■■□□ 2.77
CBX4-203ENST00000494546 KCNAB1Q14722 419 aa32.33■■■□□ 2.77
CBX4-203ENST00000494546 CERS6Q6ZMG9 384 aa32.33■■■□□ 2.77
CBX4-203ENST00000494546 SLC41A2Q96JW4 573 aa32.33■■■□□ 2.77
CBX4-203ENST00000494546 PBKQ96KB5 322 aa32.33■■■□□ 2.77
CBX4-203ENST00000494546 SRMSQ9H3Y6 488 aa32.33■■■□□ 2.77
CBX4-203ENST00000494546 BFARQ9NZS9 450 aa32.33■■■□□ 2.77
CBX4-203ENST00000494546 DLGAP3O95886 979 aa32.32■■■□□ 2.76
CBX4-203ENST00000494546 ZNF28P17035 718 aa32.32■■■□□ 2.76
CBX4-203ENST00000494546 VPS41P49754 854 aa32.32■■■□□ 2.76
CBX4-203ENST00000494546 PRKAA1Q13131 559 aa32.32■■■□□ 2.76
CBX4-203ENST00000494546 SEMA3AQ14563 771 aa32.32■■■□□ 2.76
CBX4-203ENST00000494546 NAPRTQ6XQN6 538 aa32.32■■■□□ 2.76
CBX4-203ENST00000494546 REXO1L1PQ8IX06 675 aa32.32■■■□□ 2.76
CBX4-203ENST00000494546 UNC5BQ8IZJ1 945 aa32.32■■■□□ 2.76
CBX4-203ENST00000494546 RASGEF1CQ8N431 466 aa32.32■■■□□ 2.76
CBX4-203ENST00000494546 TFGQ92734 400 aaPredicted RBP32.32■■■□□ 2.76
CBX4-203ENST00000494546 IL22Q9GZX6 179 aa32.32■■■□□ 2.76
CBX4-203ENST00000494546 TRIT1Q9H3H1 467 aaKnown RBP32.32■■■□□ 2.76
CBX4-203ENST00000494546 MVB12BQ9H7P6 319 aa32.32■■■□□ 2.76
CBX4-203ENST00000494546 ANAPC5Q9UJX4 755 aa32.32■■■□□ 2.76
CBX4-203ENST00000494546 AP3B1O00203 1094 aa32.31■■■□□ 2.76
CBX4-203ENST00000494546 C1QL1O75973 258 aa32.31■■■□□ 2.76
CBX4-203ENST00000494546 NPY2RP49146 381 aa32.31■■■□□ 2.76
CBX4-203ENST00000494546 TUBB3Q13509 450 aa32.31■■■□□ 2.76
CBX4-203ENST00000494546 BOP1Q14137 746 aaKnown RBP32.31■■■□□ 2.76
CBX4-203ENST00000494546 SYTL3Q4VX76 610 aa32.31■■■□□ 2.76
CBX4-203ENST00000494546 MAGOHBQ96A72 148 aaKnown RBP32.31■■■□□ 2.76
CBX4-203ENST00000494546 KIAA1143Q96AT1 154 aaPredicted RBP32.31■■■□□ 2.76
CBX4-203ENST00000494546 HGH1Q9BTY7 390 aa32.31■■■□□ 2.76
CBX4-203ENST00000494546 AP1M1Q9BXS5 423 aa32.31■■■□□ 2.76
CBX4-203ENST00000494546 GPN2Q9H9Y4 310 aaPredicted RBP32.31■■■□□ 2.76
CBX4-203ENST00000494546 PDE7BQ9NP56 450 aa32.31■■■□□ 2.76
CBX4-203ENST00000494546 FGF5P12034 268 aa32.3■■■□□ 2.76
CBX4-203ENST00000494546 FOLR1P15328 257 aa32.3■■■□□ 2.76
CBX4-203ENST00000494546 PPARGP37231 505 aaPredicted RBP32.3■■■□□ 2.76
CBX4-203ENST00000494546 KPNA2P52292 529 aaKnown RBP32.3■■■□□ 2.76
CBX4-203ENST00000494546 PRKG2Q13237 762 aa32.3■■■□□ 2.76
CBX4-203ENST00000494546 CYB5D1Q6P9G0 228 aa32.3■■■□□ 2.76
CBX4-203ENST00000494546 LDB1Q86U70 411 aaPredicted RBP32.3■■■□□ 2.76
CBX4-203ENST00000494546 PPP1R3BQ86XI6 285 aa32.3■■■□□ 2.76
CBX4-203ENST00000494546 KMT5CQ86Y97 462 aa32.3■■■□□ 2.76
CBX4-203ENST00000494546 SLC35F6Q8N357 371 aa32.3■■■□□ 2.76
CBX4-203ENST00000494546 ESX1Q8N693 406 aa32.3■■■□□ 2.76
CBX4-203ENST00000494546 OR52E1Q8NGJ3 308 aa32.3■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms