RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 SLC35G4P0C7Q5 338 aa18.97■□□□□ 0.63
USP39-218ENST00000493829 TFEBP19484 476 aa18.97■□□□□ 0.63
USP39-218ENST00000493829 BLKP51451 505 aa18.97■□□□□ 0.63
USP39-218ENST00000493829 CLCNKAP51800 687 aa18.97■□□□□ 0.63
USP39-218ENST00000493829 GSTM4Q03013 218 aa18.97■□□□□ 0.63
USP39-218ENST00000493829 LRP8Q14114 963 aa18.97■□□□□ 0.63
USP39-218ENST00000493829 GBX1Q14549 363 aa18.97■□□□□ 0.63
USP39-218ENST00000493829 FAM83EQ2M2I3 478 aa18.97■□□□□ 0.63
USP39-218ENST00000493829 N4BP2L1Q5TBK1 243 aaPredicted RBP18.97■□□□□ 0.63
USP39-218ENST00000493829 NRROSQ86YC3 692 aa18.97■□□□□ 0.63
USP39-218ENST00000493829 SLC22A15Q8IZD6 547 aa18.97■□□□□ 0.63
USP39-218ENST00000493829 CNPY4Q8N129 248 aa18.97■□□□□ 0.63
USP39-218ENST00000493829 LMX1AQ8TE12 382 aa18.97■□□□□ 0.63
USP39-218ENST00000493829 PTERQ96BW5 349 aa18.97■□□□□ 0.63
USP39-218ENST00000493829 ALG9Q9H6U8 611 aa18.97■□□□□ 0.63
USP39-218ENST00000493829 MLXIPLQ9NP71 852 aa18.97■□□□□ 0.63
USP39-218ENST00000493829 PRDM8Q9NQV8 689 aa18.97■□□□□ 0.63
USP39-218ENST00000493829 TRNAU1APQ9NX07 287 aaKnown RBP18.97■□□□□ 0.63
USP39-218ENST00000493829 TMEM216Q9P0N5 145 aa18.97■□□□□ 0.63
USP39-218ENST00000493829 SLC17A7Q9P2U7 560 aa18.97■□□□□ 0.63
USP39-218ENST00000493829 ACTL7BQ9Y614 415 aa18.97■□□□□ 0.63
USP39-218ENST00000493829 CFAP20Q9Y6A4 193 aaKnown RBP18.97■□□□□ 0.63
USP39-218ENST00000493829 ADAMTS9Q9P2N4 1935 aa18.96■□□□□ 0.63
USP39-218ENST00000493829 SLCO2B1O94956 709 aa18.96■□□□□ 0.63
USP39-218ENST00000493829 CBSLP0DN79 551 aa18.96■□□□□ 0.63
USP39-218ENST00000493829 RPA3P35244 121 aaPredicted RBP18.96■□□□□ 0.63
USP39-218ENST00000493829 CBSP35520 551 aa18.96■□□□□ 0.63
USP39-218ENST00000493829 DMPKQ09013 629 aa18.96■□□□□ 0.63
USP39-218ENST00000493829 TSNQ15631 228 aaKnown RBP18.96■□□□□ 0.63
USP39-218ENST00000493829 AGAP9Q5VTM2 703 aa18.96■□□□□ 0.63
USP39-218ENST00000493829 TCEAL6Q6IPX3 200 aa18.96■□□□□ 0.63
USP39-218ENST00000493829 LRRC8EQ6NSJ5 796 aa18.96■□□□□ 0.63
USP39-218ENST00000493829 DUS1LQ6P1R4 473 aaKnown RBP18.96■□□□□ 0.63
USP39-218ENST00000493829 TAF8Q7Z7C8 310 aa18.96■□□□□ 0.63
USP39-218ENST00000493829 MGARPQ8TDB4 240 aa18.96■□□□□ 0.63
USP39-218ENST00000493829 TCP10LQ8TDR4 215 aa18.96■□□□□ 0.63
USP39-218ENST00000493829 TCEAL3Q969E4 200 aa18.96■□□□□ 0.63
USP39-218ENST00000493829 RMDN2Q96LZ7 410 aa18.96■□□□□ 0.63
USP39-218ENST00000493829 DERL2Q9GZP9 239 aa18.96■□□□□ 0.63
USP39-218ENST00000493829 KLHL42Q9P2K6 505 aa18.96■□□□□ 0.63
USP39-218ENST00000493829 TBC1D29Q9UFV1 150 aa18.96■□□□□ 0.63
USP39-218ENST00000493829 ADAMTS6Q9UKP5 1117 aa18.96■□□□□ 0.63
USP39-218ENST00000493829 WDR37Q9Y2I8 494 aa18.96■□□□□ 0.63
USP39-218ENST00000493829 TDRD6O60522 2096 aaKnown RBP18.96■□□□□ 0.63
USP39-218ENST00000493829 TMEM120BA0PK00 339 aa18.95■□□□□ 0.62
USP39-218ENST00000493829 TK2O00142 265 aa18.95■□□□□ 0.62
USP39-218ENST00000493829 TYROBPO43914 113 aa18.95■□□□□ 0.62
USP39-218ENST00000493829 EML2O95834 649 aa18.95■□□□□ 0.62
USP39-218ENST00000493829 ENO3P13929 434 aaPredicted RBP18.95■□□□□ 0.62
USP39-218ENST00000493829 IDSP22304 550 aa18.95■□□□□ 0.62
USP39-218ENST00000493829 HOXD12P35452 270 aa18.95■□□□□ 0.62
USP39-218ENST00000493829 CCT5P48643 541 aa18.95■□□□□ 0.62
USP39-218ENST00000493829 OR4D1Q15615 310 aa18.95■□□□□ 0.62
USP39-218ENST00000493829 METRNLQ641Q3 311 aa18.95■□□□□ 0.62
USP39-218ENST00000493829 KLC3Q6P597 504 aa18.95■□□□□ 0.62
USP39-218ENST00000493829 CCDC91Q7Z6B0 441 aa18.95■□□□□ 0.62
USP39-218ENST00000493829 ZNF548Q8NEK5 533 aaPredicted RBP18.95■□□□□ 0.62
USP39-218ENST00000493829 OR2I1PQ8NGU4 316 aa18.95■□□□□ 0.62
USP39-218ENST00000493829 ATOH1Q92858 354 aaPredicted RBP18.95■□□□□ 0.62
USP39-218ENST00000493829 ALKBH8Q96BT7 664 aaKnown RBP18.95■□□□□ 0.62
USP39-218ENST00000493829 GPR78Q96P69 363 aa18.95■□□□□ 0.62
USP39-218ENST00000493829 GSDMCQ9BYG8 508 aa18.95■□□□□ 0.62
USP39-218ENST00000493829 OR52A5Q9H2C5 316 aa18.95■□□□□ 0.62
USP39-218ENST00000493829 NMRAL1Q9HBL8 299 aa18.95■□□□□ 0.62
USP39-218ENST00000493829 CPSF2Q9P2I0 782 aaKnown RBP18.95■□□□□ 0.62
USP39-218ENST00000493829 XPR1Q9UBH6 696 aa18.95■□□□□ 0.62
USP39-218ENST00000493829 CIDEBQ9UHD4 219 aa18.95■□□□□ 0.62
USP39-218ENST00000493829 DCDC2Q9UHG0 476 aa18.95■□□□□ 0.62
USP39-218ENST00000493829 EMCNQ9ULC0 261 aa18.95■□□□□ 0.62
USP39-218ENST00000493829 ZFC3H1O60293 1989 aaKnown RBP18.95■□□□□ 0.62
USP39-218ENST00000493829 KRT87PA6NCN2 255 aa18.95■□□□□ 0.62
USP39-218ENST00000493829 COL6A2P12110 1019 aa18.95■□□□□ 0.62
USP39-218ENST00000493829 CRHR1P34998 444 aa18.95■□□□□ 0.62
USP39-218ENST00000493829 DPP6P42658 865 aa18.95■□□□□ 0.62
USP39-218ENST00000493829 BDKRB1P46663 353 aa18.95■□□□□ 0.62
USP39-218ENST00000493829 MPP2Q14168 576 aa18.95■□□□□ 0.62
USP39-218ENST00000493829 TSNAXIP1Q2TAA8 658 aa18.95■□□□□ 0.62
USP39-218ENST00000493829 RABEPKQ7Z6M1 372 aa18.95■□□□□ 0.62
USP39-218ENST00000493829 PDZD3Q86UT5 571 aa18.95■□□□□ 0.62
USP39-218ENST00000493829 CCDC63Q8NA47 563 aa18.95■□□□□ 0.62
USP39-218ENST00000493829 CEP76Q8TAP6 659 aa18.95■□□□□ 0.62
USP39-218ENST00000493829 FAM111AQ96PZ2 611 aa18.95■□□□□ 0.62
USP39-218ENST00000493829 UCKL1Q9NWZ5 548 aa18.95■□□□□ 0.62
USP39-218ENST00000493829 MKS1Q9NXB0 559 aa18.95■□□□□ 0.62
USP39-218ENST00000493829 UTP6Q9NYH9 597 aaKnown RBP18.95■□□□□ 0.62
USP39-218ENST00000493829 GMEB2Q9UKD1 530 aa18.95■□□□□ 0.62
USP39-218ENST00000493829 KLHL33A6NCF5 533 aa18.94■□□□□ 0.62
USP39-218ENST00000493829 PRR19A6NJB7 356 aa18.94■□□□□ 0.62
USP39-218ENST00000493829 OR52A4PA6NMU1 304 aa18.94■□□□□ 0.62
USP39-218ENST00000493829 GSTA1P08263 222 aa18.94■□□□□ 0.62
USP39-218ENST00000493829 OAS2P29728 719 aaKnown RBP18.94■□□□□ 0.62
USP39-218ENST00000493829 SLC26A3P40879 764 aa18.94■□□□□ 0.62
USP39-218ENST00000493829 ATP6V0D1P61421 351 aa18.94■□□□□ 0.62
USP39-218ENST00000493829 HNRNPKP61978 463 aaKnown RBP eCLIP18.94■□□□□ 0.62
USP39-218ENST00000493829 RPA4Q13156 261 aa18.94■□□□□ 0.62
USP39-218ENST00000493829 LAIR1Q6GTX8 287 aa18.94■□□□□ 0.62
USP39-218ENST00000493829 CYHR1Q6ZMK1 362 aa18.94■□□□□ 0.62
USP39-218ENST00000493829 SFTPA2Q8IWL1 248 aa18.94■□□□□ 0.62
USP39-218ENST00000493829 FSTL5Q8N475 847 aaPredicted RBP18.94■□□□□ 0.62
USP39-218ENST00000493829 GPBAR1Q8TDU6 330 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms