RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 K7ENP7 123 aa10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 IFRD1O00458 451 aaPredicted RBP10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 PFDN6O15212 129 aa10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 KLK10O43240 276 aa10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 SGTAO43765 313 aa10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 URI1O94763 535 aaPredicted RBP10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 AP2A2O94973 939 aa10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 JMJD7P0C870 316 aa10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 MTHFD1P11586 935 aaKnown RBP10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 HGFP14210 728 aa10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 RBMS1P29558 406 aaKnown RBP10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 PREPP48147 710 aa10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 TTPAP49638 278 aa10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 PDX1P52945 283 aa10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 UBE2IP63279 158 aaKnown RBP10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 THOC5Q13769 683 aaKnown RBP10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 DHX34Q14147 1143 aaKnown RBP10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 GPR18Q14330 331 aa10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 NR1D2Q14995 579 aa10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 RPE65Q16518 533 aa10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 BBS9Q3SYG4 887 aa10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 DNAJC21Q5F1R6 531 aaKnown RBP10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 BROXQ5VW32 411 aa10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 METRNLQ641Q3 311 aa10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 PTRHD1Q6GMV3 140 aaKnown RBP10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 MRNIPQ6NTE8 343 aa10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 DUS1LQ6P1R4 473 aaKnown RBP10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 INO80CQ6PI98 192 aaPredicted RBP10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 WASH2PQ6VEQ5 465 aa10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 PACS1Q6VY07 963 aa10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 NAPRTQ6XQN6 538 aa10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 TMEM26Q6ZUK4 368 aa10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 RAB11FIP2Q7L804 512 aa10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 TMPRSS9Q7Z410 1059 aa10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 SDCCAG8Q86SQ7 713 aaPredicted RBP10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 FBXO39Q8N4B4 442 aa10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 EXD3Q8N9H8 876 aa10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 RCBTB1Q8NDN9 531 aa10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 SPDYE1Q8NFV5 336 aaPredicted RBP10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 WDR36Q8NI36 951 aaKnown RBP10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 SLCO2A1Q92959 643 aa10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 LINC00615Q96LM1 132 aaPredicted RBP10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 CCDC74BQ96LY2 380 aa10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 INSM2Q96T92 566 aaPredicted RBP10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 TRIM56Q9BRZ2 755 aaKnown RBP10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 TSSK1BQ9BXA7 367 aa10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 DPH1Q9BZG8 443 aa10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 COG4Q9H9E3 785 aa10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 WASH6PQ9NQA3 447 aa10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 TREX1Q9NSU2 369 aa10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 IL1RAPL1Q9NZN1 696 aa10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 PISDQ9UG56 409 aa10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 RPS6KL1Q9Y6S9 549 aa10.18□□□□□ -0.78
TRAPPC12-222ENST00000493792 C17orf113A0A1B0GUU1 675 aa10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 FAM237BA0A1B0GVD1 139 aa10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 MAGEB16A2A368 324 aa10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 LILRA5A6NI73 299 aa10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 PRR19A6NJB7 356 aa10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 EFSO43281 561 aa10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 UBXN7O94888 489 aa10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 PDHA2P29803 388 aa10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 CCKBRP32239 447 aa10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 CSF2RBP32927 897 aa10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 MAPK10P53779 464 aa10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 EPHA4P54764 986 aa10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 EIF3BP55884 814 aaKnown RBP10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 CKAP4Q07065 602 aaKnown RBP10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 ANKRD20A4Q4UJ75 823 aa10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 HP1BP3Q5SSJ5 553 aaPredicted RBP10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 KIAA1614Q5VZ46 1190 aa10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 KIAA0930Q6ICG6 404 aaPredicted RBP10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 HOOK3Q86VS8 718 aa10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 RBM12BQ8IXT5 1001 aaKnown RBP10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 SPATA4Q8NEY3 305 aa10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 GPR150Q8NGU9 434 aa10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 KCNE4Q8WWG9 221 aa10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 TMEM159Q96B96 161 aa10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 STAMBPL1Q96FJ0 436 aa10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 LIN37Q96GY3 246 aaPredicted RBP10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 SNF8Q96H20 258 aa10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 SGSM3Q96HU1 749 aa10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 RMDN2Q96LZ7 410 aa10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 FERD3LQ96RJ6 166 aa10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 CMKLR1Q99788 373 aa10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 DPYSL5Q9BPU6 564 aa10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 DPH5Q9H2P9 285 aa10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 SLC40A1Q9NP59 571 aa10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 C20orf96Q9NUD7 363 aaPredicted RBP10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 TMEM9Q9P0T7 183 aa10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 SNX24Q9Y343 169 aa10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 LOXL2Q9Y4K0 774 aa10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 PCDHGA8Q9Y5G5 932 aa10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 HEBP2Q9Y5Z4 205 aa10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 COLEC10Q9Y6Z7 277 aa10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 UNC13CQ8NB66 2214 aa10.17□□□□□ -0.78
TRAPPC12-222ENST00000493792 AHCTF1Q8WYP5 2266 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 IGHV5-10-1A0A0J9YXX1 117 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 PMS2P1A4D2B8 440 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 IQCF5A8MTL0 148 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 PRMT5O14744 637 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms