RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 ACTR1AP61163 376 aa12.18□□□□□ -0.46
SNX17-208ENST00000493711 ATP6V0D1P61421 351 aa12.18□□□□□ -0.46
SNX17-208ENST00000493711 HSPA14Q0VDF9 509 aa12.18□□□□□ -0.46
SNX17-208ENST00000493711 GPS2Q13227 327 aa12.18□□□□□ -0.46
SNX17-208ENST00000493711 GBX1Q14549 363 aa12.18□□□□□ -0.46
SNX17-208ENST00000493711 SUZ12Q15022 739 aaKnown RBP12.18□□□□□ -0.46
SNX17-208ENST00000493711 CSRP2Q16527 193 aa12.18□□□□□ -0.46
SNX17-208ENST00000493711 FAM83EQ2M2I3 478 aa12.18□□□□□ -0.46
SNX17-208ENST00000493711 INAVAQ3KP66 663 aa12.18□□□□□ -0.46
SNX17-208ENST00000493711 TBC1D1Q86TI0 1168 aaPredicted RBP12.18□□□□□ -0.46
SNX17-208ENST00000493711 SLC22A15Q8IZD6 547 aa12.18□□□□□ -0.46
SNX17-208ENST00000493711 MYO1HQ8N1T3 1032 aa12.18□□□□□ -0.46
SNX17-208ENST00000493711 SIDT2Q8NBJ9 832 aaKnown RBP12.18□□□□□ -0.46
SNX17-208ENST00000493711 ZNF548Q8NEK5 533 aaPredicted RBP12.18□□□□□ -0.46
SNX17-208ENST00000493711 LMX1AQ8TE12 382 aa12.18□□□□□ -0.46
SNX17-208ENST00000493711 ALKBH8Q96BT7 664 aaKnown RBP12.18□□□□□ -0.46
SNX17-208ENST00000493711 FOPNLQ96NB1 174 aa12.18□□□□□ -0.46
SNX17-208ENST00000493711 LRRC61Q9BV99 259 aa12.18□□□□□ -0.46
SNX17-208ENST00000493711 OSGEPL1Q9H4B0 414 aa12.18□□□□□ -0.46
SNX17-208ENST00000493711 GAREM1Q9H706 876 aa12.18□□□□□ -0.46
SNX17-208ENST00000493711 SLC23A2Q9UGH3 650 aa12.18□□□□□ -0.46
SNX17-208ENST00000493711 KCNK6Q9Y257 313 aa12.18□□□□□ -0.46
SNX17-208ENST00000493711 MED16Q9Y2X0 877 aa12.18□□□□□ -0.46
SNX17-208ENST00000493711 PCDHGB2Q9Y5G2 931 aa12.18□□□□□ -0.46
SNX17-208ENST00000493711 HEBP2Q9Y5Z4 205 aa12.18□□□□□ -0.46
SNX17-208ENST00000493711 ACTL7BQ9Y614 415 aa12.18□□□□□ -0.46
SNX17-208ENST00000493711 NUMA1Q14980 2115 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 ZNF106Q9H2Y7 1883 aaKnown RBP12.17□□□□□ -0.46
SNX17-208ENST00000493711 FAM186AA6NE01 2351 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 A0A096LPK6 155 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 KIR2DS5A0A0G2JLQ3 304 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 A0A0G2JNG1 304 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 PDZK1P1A8MUH7 402 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 KIR2DS3K7RE56 304 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 SCAMP1O15126 338 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 PCDHGA12O60330 932 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 KDM1AO60341 852 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 ALDOAP04075 364 aaKnown RBP12.17□□□□□ -0.46
SNX17-208ENST00000493711 C2P06681 752 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 GSTA1P08263 222 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 F7P08709 466 aaPredicted RBP12.17□□□□□ -0.46
SNX17-208ENST00000493711 ENGP17813 658 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 ITGB6P18564 788 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 NDUFS1P28331 727 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 EPHA8P29322 1005 aaPredicted RBP12.17□□□□□ -0.46
SNX17-208ENST00000493711 CSRP3P50461 194 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 IRX4P78413 519 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 TIAL1Q01085 375 aaKnown RBP eCLIP12.17□□□□□ -0.46
SNX17-208ENST00000493711 NFE2L1Q14494 772 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 KIR2DS5Q14953 304 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 TSNAXIP1Q2TAA8 658 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 UAP1L1Q3KQV9 507 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 PLA2G4EQ3MJ16 856 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 ZNF542PQ5EBM4 170 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 KLC3Q6P597 504 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 PAQR3Q6TCH7 311 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 ABRAXAS1Q6UWZ7 409 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 UNC5DQ6UXZ4 953 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 PDZD3Q86UT5 571 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 CEP97Q8IW35 865 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 LKAAEAR1Q8TD35 194 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 MZB1Q8WU39 189 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 UBXN10Q96LJ8 280 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 DUSP23Q9BVJ7 150 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 DERL2Q9GZP9 239 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 CENPHQ9H3R5 247 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 CAB39LQ9H9S4 337 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 NMRAL1Q9HBL8 299 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 TM7SF3Q9NS93 570 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 NCKIPSDQ9NZQ3 722 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 TAAR2Q9P1P5 351 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 KLF15Q9UIH9 416 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 PNMA8BQ9ULN7 279 aaPredicted RBP12.17□□□□□ -0.46
SNX17-208ENST00000493711 DNAJC16Q9Y2G8 782 aa12.17□□□□□ -0.46
SNX17-208ENST00000493711 SCN8AQ9UQD0 1980 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 PABPN1LA6NDY0 278 aaKnown RBP12.16□□□□□ -0.46
SNX17-208ENST00000493711 PATE3B3GLJ2 98 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 SLC16A5O15375 505 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 PHGDHO43175 533 aaKnown RBP12.16□□□□□ -0.46
SNX17-208ENST00000493711 RFPL1O75677 317 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 C8GP07360 202 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 LTA4HP09960 611 aaKnown RBP12.16□□□□□ -0.46
SNX17-208ENST00000493711 SLC35E2BP0CK96 405 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 CCDC166P0CW27 439 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 F3P13726 295 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 CCNFP41002 786 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 CCT5P48643 541 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 SLC14A1Q13336 389 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 SP140Q13342 867 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 AGBL2Q5U5Z8 902 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 KCTD16Q68DU8 428 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 TTC23LQ6PF05 361 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 SLC30A9Q6PML9 568 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 CMC1Q7Z7K0 106 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 TRABD2AQ86V40 505 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 PIM3Q86V86 326 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 NRROSQ86YC3 692 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 RBM12BQ8IXT5 1001 aaKnown RBP12.16□□□□□ -0.46
SNX17-208ENST00000493711 ACVR1CQ8NER5 493 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 GIMAP7Q8NHV1 300 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms