RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 OCRLQ01968 901 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 PLOD1Q02809 727 aaPredicted RBP12.4□□□□□ -0.42
VPS52-220ENST00000493674 DMWDQ09019 674 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 HSPA14Q0VDF9 509 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 RPA4Q13156 261 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 GLIPR1L2Q4G1C9 344 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 PYCR3Q53H96 274 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 CDKL4Q5MAI5 379 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 DOK6Q6PKX4 331 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 CRTC3Q6UUV7 619 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 ATG14Q6ZNE5 492 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 FAM83HQ6ZRV2 1179 aaPredicted RBP12.4□□□□□ -0.42
VPS52-220ENST00000493674 TAX1BP1Q86VP1 789 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 SLC22A9Q8IVM8 553 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 LRRC34Q8IZ02 419 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 LILRA3Q8N6C8 439 aaPredicted RBP12.4□□□□□ -0.42
VPS52-220ENST00000493674 PDPRQ8NCN5 879 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 FAM174AQ8TBP5 190 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 ASB11Q8WXH4 323 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 WDR92Q96MX6 357 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 C7orf26Q96N11 449 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 TMEM237Q96Q45 408 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 GATA5Q9BWX5 397 aaPredicted RBP12.4□□□□□ -0.42
VPS52-220ENST00000493674 C1QTNF3Q9BXJ4 246 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 IRF2BPLQ9H1B7 796 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 OR52A5Q9H2C5 316 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 OARD1Q9Y530 152 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 TMEM114B3SHH9 223 aa12.39□□□□□ -0.43
VPS52-220ENST00000493674 KCNJ13O60928 360 aa12.39□□□□□ -0.43
VPS52-220ENST00000493674 PSIP1O75475 530 aaKnown RBP12.39□□□□□ -0.43
VPS52-220ENST00000493674 ENO2P09104 434 aaPredicted RBP12.39□□□□□ -0.43
VPS52-220ENST00000493674 TPBGLP0DKB5 382 aa12.39□□□□□ -0.43
VPS52-220ENST00000493674 KELP23276 732 aa12.39□□□□□ -0.43
VPS52-220ENST00000493674 CD27P26842 260 aa12.39□□□□□ -0.43
VPS52-220ENST00000493674 ACADLP28330 430 aa12.39□□□□□ -0.43
VPS52-220ENST00000493674 MAPK9P45984 424 aa12.39□□□□□ -0.43
VPS52-220ENST00000493674 RABIFP47224 123 aa12.39□□□□□ -0.43
VPS52-220ENST00000493674 PREPP48147 710 aa12.39□□□□□ -0.43
VPS52-220ENST00000493674 CDKL1Q00532 357 aa12.39□□□□□ -0.43
VPS52-220ENST00000493674 ASPHQ12797 758 aa12.39□□□□□ -0.43
VPS52-220ENST00000493674 TERF2Q15554 542 aa12.39□□□□□ -0.43
VPS52-220ENST00000493674 TGFBIQ15582 683 aa12.39□□□□□ -0.43
VPS52-220ENST00000493674 PHKG1Q16816 387 aa12.39□□□□□ -0.43
VPS52-220ENST00000493674 ATG16L1Q676U5 607 aa12.39□□□□□ -0.43
VPS52-220ENST00000493674 CGB2Q6NT52 195 aa12.39□□□□□ -0.43
VPS52-220ENST00000493674 SLC36A4Q6YBV0 504 aa12.39□□□□□ -0.43
VPS52-220ENST00000493674 ZCCHC23Q6ZST2 131 aa12.39□□□□□ -0.43
VPS52-220ENST00000493674 WDR5BQ86VZ2 330 aa12.39□□□□□ -0.43
VPS52-220ENST00000493674 AMZ2Q86W34 360 aa12.39□□□□□ -0.43
VPS52-220ENST00000493674 GPSM1Q86YR5 675 aa12.39□□□□□ -0.43
VPS52-220ENST00000493674 MAML2Q8IZL2 1156 aaPredicted RBP12.39□□□□□ -0.43
VPS52-220ENST00000493674 SLC22A18ASQ8N1D0 253 aa12.39□□□□□ -0.43
VPS52-220ENST00000493674 DTWD2Q8NBA8 298 aa12.39□□□□□ -0.43
VPS52-220ENST00000493674 FBXO15Q8NCQ5 510 aaPredicted RBP12.39□□□□□ -0.43
VPS52-220ENST00000493674 C1orf216Q8TAB5 229 aa12.39□□□□□ -0.43
VPS52-220ENST00000493674 UBTD2Q8WUN7 234 aa12.39□□□□□ -0.43
VPS52-220ENST00000493674 TMEM159Q96B96 161 aa12.39□□□□□ -0.43
VPS52-220ENST00000493674 SPACA7Q96KW9 195 aa12.39□□□□□ -0.43
VPS52-220ENST00000493674 SORT1Q99523 831 aa12.39□□□□□ -0.43
VPS52-220ENST00000493674 SLC12A9Q9BXP2 914 aa12.39□□□□□ -0.43
VPS52-220ENST00000493674 DPEP2Q9H4A9 486 aa12.39□□□□□ -0.43
VPS52-220ENST00000493674 SLCO1B3Q9NPD5 702 aa12.39□□□□□ -0.43
VPS52-220ENST00000493674 SLC23A2Q9UGH3 650 aa12.39□□□□□ -0.43
VPS52-220ENST00000493674 HAO1Q9UJM8 370 aa12.39□□□□□ -0.43
VPS52-220ENST00000493674 RNF112Q9ULX5 631 aa12.39□□□□□ -0.43
VPS52-220ENST00000493674 SLCO1B1Q9Y6L6 691 aa12.39□□□□□ -0.43
VPS52-220ENST00000493674 RALGAPA1Q6GYQ0 2036 aa12.38□□□□□ -0.43
VPS52-220ENST00000493674 PCDH15Q96QU1 1955 aa12.38□□□□□ -0.43
VPS52-220ENST00000493674 MDC1Q14676 2089 aaKnown RBP12.38□□□□□ -0.43
VPS52-220ENST00000493674 A0A1W2PR77 199 aa12.38□□□□□ -0.43
VPS52-220ENST00000493674 PRSS38A1L453 326 aa12.38□□□□□ -0.43
VPS52-220ENST00000493674 NPHS1O60500 1241 aa12.38□□□□□ -0.43
VPS52-220ENST00000493674 SMIM24O75264 130 aa12.38□□□□□ -0.43
VPS52-220ENST00000493674 NDUFS2O75306 463 aa12.38□□□□□ -0.43
VPS52-220ENST00000493674 FAM107AO95990 144 aa12.38□□□□□ -0.43
VPS52-220ENST00000493674 RPS17P08708 135 aaKnown RBP12.38□□□□□ -0.43
VPS52-220ENST00000493674 IMPDH1P20839 514 aa12.38□□□□□ -0.43
VPS52-220ENST00000493674 BCKDHBP21953 392 aa12.38□□□□□ -0.43
VPS52-220ENST00000493674 PDHA2P29803 388 aa12.38□□□□□ -0.43
VPS52-220ENST00000493674 PBLDP30039 288 aaPredicted RBP12.38□□□□□ -0.43
VPS52-220ENST00000493674 SERPINB5P36952 375 aa12.38□□□□□ -0.43
VPS52-220ENST00000493674 CLCNKAP51800 687 aa12.38□□□□□ -0.43
VPS52-220ENST00000493674 ALDH18A1P54886 795 aaKnown RBP12.38□□□□□ -0.43
VPS52-220ENST00000493674 HERVK_113P63132 956 aa12.38□□□□□ -0.43
VPS52-220ENST00000493674 STX3Q13277 289 aa12.38□□□□□ -0.43
VPS52-220ENST00000493674 RCN2Q14257 317 aa12.38□□□□□ -0.43
VPS52-220ENST00000493674 NFE2L1Q14494 772 aa12.38□□□□□ -0.43
VPS52-220ENST00000493674 SETDB1Q15047 1291 aa12.38□□□□□ -0.43
VPS52-220ENST00000493674 SYTL3Q4VX76 610 aa12.38□□□□□ -0.43
VPS52-220ENST00000493674 USP39Q53GS9 565 aaKnown RBP12.38□□□□□ -0.43
VPS52-220ENST00000493674 METRNLQ641Q3 311 aa12.38□□□□□ -0.43
VPS52-220ENST00000493674 PDZD3Q86UT5 571 aa12.38□□□□□ -0.43
VPS52-220ENST00000493674 PTGR2Q8N8N7 351 aaPredicted RBP12.38□□□□□ -0.43
VPS52-220ENST00000493674 OR13H1Q8NG92 308 aa12.38□□□□□ -0.43
VPS52-220ENST00000493674 OR56A4Q8NGH8 313 aa12.38□□□□□ -0.43
VPS52-220ENST00000493674 SREK1Q8WXA9 508 aaKnown RBP12.38□□□□□ -0.43
VPS52-220ENST00000493674 OR1E3Q8WZA6 343 aa12.38□□□□□ -0.43
VPS52-220ENST00000493674 PDXPQ96GD0 296 aa12.38□□□□□ -0.43
VPS52-220ENST00000493674 ERVK-6Q9BXR3 956 aa12.38□□□□□ -0.43
VPS52-220ENST00000493674 C20orf27Q9GZN8 174 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms