RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 PDZD3Q86UT5 571 aa12.49□□□□□ -0.41
CLIP2-209ENST00000493166 ANKMY2Q8IV38 441 aa12.49□□□□□ -0.41
CLIP2-209ENST00000493166 DENND6AQ8IWF6 608 aa12.49□□□□□ -0.41
CLIP2-209ENST00000493166 CTAGE4Q8IX94 777 aa12.49□□□□□ -0.41
CLIP2-209ENST00000493166 LMNTD2Q8IXW0 634 aa12.49□□□□□ -0.41
CLIP2-209ENST00000493166 KRT222Q8N1A0 295 aa12.49□□□□□ -0.41
CLIP2-209ENST00000493166 LKAAEAR1Q8TD35 194 aa12.49□□□□□ -0.41
CLIP2-209ENST00000493166 TMEM159Q96B96 161 aa12.49□□□□□ -0.41
CLIP2-209ENST00000493166 NRSN2Q9GZP1 204 aa12.49□□□□□ -0.41
CLIP2-209ENST00000493166 IARS2Q9NSE4 1012 aaKnown RBP12.49□□□□□ -0.41
CLIP2-209ENST00000493166 GRHL1Q9NZI5 618 aa12.49□□□□□ -0.41
CLIP2-209ENST00000493166 CRYL1Q9Y2S2 319 aa12.49□□□□□ -0.41
CLIP2-209ENST00000493166 COLEC10Q9Y6Z7 277 aa12.49□□□□□ -0.41
CLIP2-209ENST00000493166 CCDC187A0A096LP49 1063 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 SLC5A10A0PJK1 596 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 C1QTNF9BB2RNN3 333 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 E7ESA3 106 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 H3BMM5 538 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 UBXN7O94888 489 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 ESR1P03372 595 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 APOA4P06727 396 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 PROS1P07225 676 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 C1QTNF9P0C862 333 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 ERVK-10P10266 1014 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 HOXB3P14651 431 aaPredicted RBP12.48□□□□□ -0.41
CLIP2-209ENST00000493166 TYRP1P17643 537 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 AMD1P17707 334 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 NDUFS1P28331 727 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 CCR7P32248 378 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 SLC1A2P43004 574 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 CD151P48509 253 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 PLTPP55058 493 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 ADARP55265 1226 aaKnown RBP12.48□□□□□ -0.41
CLIP2-209ENST00000493166 CAV1Q03135 178 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 ZFP36L1Q07352 338 aaKnown RBP12.48□□□□□ -0.41
CLIP2-209ENST00000493166 HSPA14Q0VDF9 509 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 SQSTM1Q13501 440 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 C3orf38Q5JPI3 329 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 CTSL3PQ5NE16 218 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 WDR74Q6RFH5 385 aaPredicted RBP12.48□□□□□ -0.41
CLIP2-209ENST00000493166 UNC5AQ6ZN44 842 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 OTOAQ7RTW8 1153 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 SLITRK4Q8IW52 837 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 ZBED8Q8IZ13 594 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 UNC5BQ8IZJ1 945 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 FBXO36Q8NEA4 188 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 OR4D9Q8NGE8 314 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 ASZ1Q8WWH4 475 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 JPH3Q8WXH2 748 aaPredicted RBP12.48□□□□□ -0.41
CLIP2-209ENST00000493166 NCSTNQ92542 709 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 CERS2Q96G23 380 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 LIN37Q96GY3 246 aaPredicted RBP12.48□□□□□ -0.41
CLIP2-209ENST00000493166 BIRC8Q96P09 236 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 FERD3LQ96RJ6 166 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 WDR83Q9BRX9 315 aaKnown RBP12.48□□□□□ -0.41
CLIP2-209ENST00000493166 LRRC1Q9BTT6 524 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 TMEM121BQ9BXQ6 578 aaPredicted RBP12.48□□□□□ -0.41
CLIP2-209ENST00000493166 CCDC68Q9H2F9 335 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 SEMA6CQ9H3T2 930 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 PPANQ9NQ55 473 aaKnown RBP12.48□□□□□ -0.41
CLIP2-209ENST00000493166 FBXO6Q9NRD1 293 aaPredicted RBP12.48□□□□□ -0.41
CLIP2-209ENST00000493166 FBXO5Q9UKT4 447 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 SATB2Q9UPW6 733 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 AK5Q9Y6K8 562 aa12.48□□□□□ -0.41
CLIP2-209ENST00000493166 IGHV5-10-1A0A0J9YXX1 117 aa12.47□□□□□ -0.41
CLIP2-209ENST00000493166 E5RI56 91 aa12.47□□□□□ -0.41
CLIP2-209ENST00000493166 KPNA5O15131 536 aa12.47□□□□□ -0.41
CLIP2-209ENST00000493166 S1PR4O95977 384 aa12.47□□□□□ -0.41
CLIP2-209ENST00000493166 F7P08709 466 aaPredicted RBP12.47□□□□□ -0.41
CLIP2-209ENST00000493166 MPSTP25325 297 aa12.47□□□□□ -0.41
CLIP2-209ENST00000493166 AOAHP28039 575 aa12.47□□□□□ -0.41
CLIP2-209ENST00000493166 CAPZBP47756 277 aa12.47□□□□□ -0.41
CLIP2-209ENST00000493166 LIMK2P53671 638 aa12.47□□□□□ -0.41
CLIP2-209ENST00000493166 GABREP78334 506 aa12.47□□□□□ -0.41
CLIP2-209ENST00000493166 MPP1Q00013 466 aa12.47□□□□□ -0.41
CLIP2-209ENST00000493166 CFHR1Q03591 330 aa12.47□□□□□ -0.41
CLIP2-209ENST00000493166 FASTKD3Q14CZ7 662 aaKnown RBP12.47□□□□□ -0.41
CLIP2-209ENST00000493166 ZNF789Q5FWF6 425 aa12.47□□□□□ -0.41
CLIP2-209ENST00000493166 STEAP4Q687X5 459 aa12.47□□□□□ -0.41
CLIP2-209ENST00000493166 TMEM71Q6P5X7 295 aa12.47□□□□□ -0.41
CLIP2-209ENST00000493166 FOXR1Q6PIV2 292 aa12.47□□□□□ -0.41
CLIP2-209ENST00000493166 ZNF574Q6ZN55 896 aaPredicted RBP12.47□□□□□ -0.41
CLIP2-209ENST00000493166 MMGT1Q8N4V1 131 aa12.47□□□□□ -0.41
CLIP2-209ENST00000493166 CEP112Q8N8E3 955 aa12.47□□□□□ -0.41
CLIP2-209ENST00000493166 NOA1Q8NC60 698 aaKnown RBP12.47□□□□□ -0.41
CLIP2-209ENST00000493166 WDR36Q8NI36 951 aaKnown RBP12.47□□□□□ -0.41
CLIP2-209ENST00000493166 GSDMBQ8TAX9 411 aa12.47□□□□□ -0.41
CLIP2-209ENST00000493166 ZFPM2Q8WW38 1151 aa12.47□□□□□ -0.41
CLIP2-209ENST00000493166 TFGQ92734 400 aaPredicted RBP12.47□□□□□ -0.41
CLIP2-209ENST00000493166 ART4Q93070 314 aa12.47□□□□□ -0.41
CLIP2-209ENST00000493166 CCDC74BQ96LY2 380 aa12.47□□□□□ -0.41
CLIP2-209ENST00000493166 CNTNAP3BQ96NU0 1288 aa12.47□□□□□ -0.41
CLIP2-209ENST00000493166 CNTNAP3Q9BZ76 1288 aa12.47□□□□□ -0.41
CLIP2-209ENST00000493166 CCDC86Q9H6F5 360 aaKnown RBP12.47□□□□□ -0.41
CLIP2-209ENST00000493166 KIR3DX1Q9H7L2 352 aa12.47□□□□□ -0.41
CLIP2-209ENST00000493166 MVB12BQ9H7P6 319 aa12.47□□□□□ -0.41
CLIP2-209ENST00000493166 SAYSD1Q9NPB0 183 aa12.47□□□□□ -0.41
CLIP2-209ENST00000493166 OGFRQ9NZT2 677 aa12.47□□□□□ -0.41
CLIP2-209ENST00000493166 AKAP7Q9P0M2 348 aaPredicted RBP12.47□□□□□ -0.41
CLIP2-209ENST00000493166 TMEM9Q9P0T7 183 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms