RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 CLPTM1O96005 669 aa22.39■■□□□ 1.18
USF3-203ENST00000491165 ADH1BP00325 375 aa22.39■■□□□ 1.18
USF3-203ENST00000491165 C7P10643 843 aa22.39■■□□□ 1.18
USF3-203ENST00000491165 C5AR1P21730 350 aa22.39■■□□□ 1.18
USF3-203ENST00000491165 PTSQ03393 145 aa22.39■■□□□ 1.18
USF3-203ENST00000491165 FAM46CQ5VWP2 391 aa22.39■■□□□ 1.18
USF3-203ENST00000491165 KLC3Q6P597 504 aa22.39■■□□□ 1.18
USF3-203ENST00000491165 RFLNAQ6ZTI6 216 aa22.39■■□□□ 1.18
USF3-203ENST00000491165 USP45Q70EL2 814 aa22.39■■□□□ 1.18
USF3-203ENST00000491165 HDDC3Q8N4P3 179 aa22.39■■□□□ 1.18
USF3-203ENST00000491165 FAM156AQ8NDB6 213 aa22.39■■□□□ 1.18
USF3-203ENST00000491165 GABPB2Q8TAK5 448 aaPredicted RBP22.39■■□□□ 1.18
USF3-203ENST00000491165 SIPA1Q96FS4 1042 aa22.39■■□□□ 1.18
USF3-203ENST00000491165 NDNQ99608 321 aa22.39■■□□□ 1.18
USF3-203ENST00000491165 HDAC8Q9BY41 377 aa22.39■■□□□ 1.18
USF3-203ENST00000491165 MFSD1Q9H3U5 465 aa22.39■■□□□ 1.18
USF3-203ENST00000491165 CYP4F12Q9HCS2 524 aa22.39■■□□□ 1.18
USF3-203ENST00000491165 HEATR9A2RTY3 570 aa22.39■■□□□ 1.17
USF3-203ENST00000491165 A8MT66 165 aa22.39■■□□□ 1.17
USF3-203ENST00000491165 AREL1O15033 823 aa22.39■■□□□ 1.17
USF3-203ENST00000491165 IPO13O94829 963 aaKnown RBP22.39■■□□□ 1.17
USF3-203ENST00000491165 MMP12P39900 470 aa22.39■■□□□ 1.17
USF3-203ENST00000491165 ARSDP51689 593 aa22.39■■□□□ 1.17
USF3-203ENST00000491165 PDAP1Q13442 181 aaKnown RBP22.39■■□□□ 1.17
USF3-203ENST00000491165 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.39■■□□□ 1.17
USF3-203ENST00000491165 TMEM102Q8N9M5 508 aaPredicted RBP22.39■■□□□ 1.17
USF3-203ENST00000491165 DNAJC1Q96KC8 554 aaKnown RBP22.39■■□□□ 1.17
USF3-203ENST00000491165 OLFM1Q99784 485 aa22.39■■□□□ 1.17
USF3-203ENST00000491165 MRPS26Q9BYN8 205 aaKnown RBP22.39■■□□□ 1.17
USF3-203ENST00000491165 DYRK4Q9NR20 520 aa22.39■■□□□ 1.17
USF3-203ENST00000491165 FBXL12Q9NXK8 326 aa22.39■■□□□ 1.17
USF3-203ENST00000491165 EBF1Q9UH73 591 aa22.39■■□□□ 1.17
USF3-203ENST00000491165 ZNF106Q9H2Y7 1883 aaKnown RBP22.38■■□□□ 1.17
USF3-203ENST00000491165 A0A1W2PQ67 120 aa22.38■■□□□ 1.17
USF3-203ENST00000491165 RNASEH2AO75792 299 aaKnown RBP22.38■■□□□ 1.17
USF3-203ENST00000491165 LTA4HP09960 611 aaKnown RBP22.38■■□□□ 1.17
USF3-203ENST00000491165 RPS9P46781 194 aaKnown RBP22.38■■□□□ 1.17
USF3-203ENST00000491165 CLCN5P51795 746 aa22.38■■□□□ 1.17
USF3-203ENST00000491165 ZNF140P52738 457 aaPredicted RBP22.38■■□□□ 1.17
USF3-203ENST00000491165 TAF1AQ15573 450 aaPredicted RBP22.38■■□□□ 1.17
USF3-203ENST00000491165 ARMC3Q5W041 872 aa22.38■■□□□ 1.17
USF3-203ENST00000491165 CUZD1Q86UP6 607 aa22.38■■□□□ 1.17
USF3-203ENST00000491165 PNPLA1Q8N8W4 532 aa22.38■■□□□ 1.17
USF3-203ENST00000491165 DGCR14Q96DF8 476 aaKnown RBP22.38■■□□□ 1.17
USF3-203ENST00000491165 TSPAN17Q96FV3 270 aa22.38■■□□□ 1.17
USF3-203ENST00000491165 ZNF696Q9H7X3 374 aa22.38■■□□□ 1.17
USF3-203ENST00000491165 ZFYVE1Q9HBF4 777 aa22.38■■□□□ 1.17
USF3-203ENST00000491165 CNOT11Q9UKZ1 510 aaKnown RBP22.38■■□□□ 1.17
USF3-203ENST00000491165 UBDO15205 165 aa22.37■■□□□ 1.17
USF3-203ENST00000491165 OR6B1O95007 311 aa22.37■■□□□ 1.17
USF3-203ENST00000491165 DNTTP04053 509 aa22.37■■□□□ 1.17
USF3-203ENST00000491165 RBP1P09455 135 aa22.37■■□□□ 1.17
USF3-203ENST00000491165 HMGCLP35914 325 aa22.37■■□□□ 1.17
USF3-203ENST00000491165 DGKEP52429 567 aa22.37■■□□□ 1.17
USF3-203ENST00000491165 TRIM25Q14258 630 aaKnown RBP22.37■■□□□ 1.17
USF3-203ENST00000491165 FASTKQ14296 549 aaKnown RBP22.37■■□□□ 1.17
USF3-203ENST00000491165 KIAA1324Q6UXG2 1013 aaKnown RBP22.37■■□□□ 1.17
USF3-203ENST00000491165 GALNT4Q8N4A0 578 aa22.37■■□□□ 1.17
USF3-203ENST00000491165 OR4K2Q8NGD2 314 aa22.37■■□□□ 1.17
USF3-203ENST00000491165 FAM131CQ96AQ9 280 aa22.37■■□□□ 1.17
USF3-203ENST00000491165 FBRSQ9HAH7 460 aa22.37■■□□□ 1.17
USF3-203ENST00000491165 TRPM6Q9BX84 2022 aa22.37■■□□□ 1.17
USF3-203ENST00000491165 PSMD12O00232 456 aaPredicted RBP22.37■■□□□ 1.17
USF3-203ENST00000491165 TFAP2AP05549 437 aa22.37■■□□□ 1.17
USF3-203ENST00000491165 LEPRP48357 1165 aaKnown RBP22.37■■□□□ 1.17
USF3-203ENST00000491165 PXNP49023 591 aaPredicted RBP22.37■■□□□ 1.17
USF3-203ENST00000491165 ZNF789Q5FWF6 425 aa22.37■■□□□ 1.17
USF3-203ENST00000491165 C6orf52Q5T4I8 152 aa22.37■■□□□ 1.17
USF3-203ENST00000491165 REP15Q6BDI9 236 aa22.37■■□□□ 1.17
USF3-203ENST00000491165 HMGCLL1Q8TB92 370 aa22.37■■□□□ 1.17
USF3-203ENST00000491165 WRAP53Q9BUR4 548 aaKnown RBP22.37■■□□□ 1.17
USF3-203ENST00000491165 GPR63Q9BZJ6 419 aa22.37■■□□□ 1.17
USF3-203ENST00000491165 IL17CQ9P0M4 197 aa22.37■■□□□ 1.17
USF3-203ENST00000491165 PCDHGB4Q9UN71 923 aa22.37■■□□□ 1.17
USF3-203ENST00000491165 PCDHGB5Q9Y5G0 923 aa22.37■■□□□ 1.17
USF3-203ENST00000491165 E7ENX8 843 aa22.36■■□□□ 1.17
USF3-203ENST00000491165 C8BP07358 591 aa22.36■■□□□ 1.17
USF3-203ENST00000491165 C1SP09871 688 aa22.36■■□□□ 1.17
USF3-203ENST00000491165 CCDC166P0CW27 439 aa22.36■■□□□ 1.17
USF3-203ENST00000491165 XPAP23025 273 aaPredicted RBP22.36■■□□□ 1.17
USF3-203ENST00000491165 MYBPC1Q00872 1141 aa22.36■■□□□ 1.17
USF3-203ENST00000491165 LRP8Q14114 963 aa22.36■■□□□ 1.17
USF3-203ENST00000491165 AGKQ53H12 422 aa22.36■■□□□ 1.17
USF3-203ENST00000491165 IL23RQ5VWK5 629 aa22.36■■□□□ 1.17
USF3-203ENST00000491165 DPPA4Q7L190 304 aa22.36■■□□□ 1.17
USF3-203ENST00000491165 APPL1Q9UKG1 709 aa22.36■■□□□ 1.17
USF3-203ENST00000491165 FADS3Q9Y5Q0 445 aa22.36■■□□□ 1.17
USF3-203ENST00000491165 EML5Q05BV3 1969 aa22.36■■□□□ 1.17
USF3-203ENST00000491165 GPR39O43194 453 aa22.36■■□□□ 1.17
USF3-203ENST00000491165 ATG13O75143 517 aa22.36■■□□□ 1.17
USF3-203ENST00000491165 FAM58BPP0C7Q3 252 aa22.36■■□□□ 1.17
USF3-203ENST00000491165 INHBCP55103 352 aa22.36■■□□□ 1.17
USF3-203ENST00000491165 CDKL1Q00532 357 aa22.36■■□□□ 1.17
USF3-203ENST00000491165 GALNT1Q10472 559 aaPredicted RBP22.36■■□□□ 1.17
USF3-203ENST00000491165 ACAP2Q15057 778 aa22.36■■□□□ 1.17
USF3-203ENST00000491165 FAM124AQ86V42 546 aa22.36■■□□□ 1.17
USF3-203ENST00000491165 SLC22A9Q8IVM8 553 aa22.36■■□□□ 1.17
USF3-203ENST00000491165 SPEM1Q8N4L4 309 aa22.36■■□□□ 1.17
USF3-203ENST00000491165 ATP6V1E2Q96A05 226 aa22.36■■□□□ 1.17
USF3-203ENST00000491165 TBATAQ96M53 351 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms