RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 RANBP9Q96S59 729 aa30.57■■■□□ 2.48
LDB1-204ENST00000490751 CASS4Q9NQ75 786 aa30.57■■■□□ 2.48
LDB1-204ENST00000490751 SLC2A6Q9UGQ3 507 aa30.57■■■□□ 2.48
LDB1-204ENST00000490751 TLCD2A6NGC4 264 aa30.56■■■□□ 2.48
LDB1-204ENST00000490751 FGGP02679 453 aa30.56■■■□□ 2.48
LDB1-204ENST00000490751 FGF5P12034 268 aa30.56■■■□□ 2.48
LDB1-204ENST00000490751 RPL22P35268 128 aaKnown RBP30.56■■■□□ 2.48
LDB1-204ENST00000490751 NSG1P42857 185 aa30.56■■■□□ 2.48
LDB1-204ENST00000490751 MAP7Q14244 749 aa30.56■■■□□ 2.48
LDB1-204ENST00000490751 TBR1Q16650 682 aa30.56■■■□□ 2.48
LDB1-204ENST00000490751 TSTD2Q5T7W7 516 aa30.56■■■□□ 2.48
LDB1-204ENST00000490751 ARMC6Q6NXE6 501 aa30.56■■■□□ 2.48
LDB1-204ENST00000490751 DRICH1Q6PGQ1 229 aaPredicted RBP30.56■■■□□ 2.48
LDB1-204ENST00000490751 ESX1Q8N693 406 aa30.56■■■□□ 2.48
LDB1-204ENST00000490751 EXD3Q8N9H8 876 aa30.56■■■□□ 2.48
LDB1-204ENST00000490751 SIDT2Q8NBJ9 832 aaKnown RBP30.56■■■□□ 2.48
LDB1-204ENST00000490751 FERD3LQ96RJ6 166 aa30.56■■■□□ 2.48
LDB1-204ENST00000490751 PRSS21Q9Y6M0 314 aa30.56■■■□□ 2.48
LDB1-204ENST00000490751 UBA6A0AVT1 1052 aaPredicted RBP30.55■■■□□ 2.48
LDB1-204ENST00000490751 IFRD1O00458 451 aaPredicted RBP30.55■■■□□ 2.48
LDB1-204ENST00000490751 NRDCO43847 1150 aa30.55■■■□□ 2.48
LDB1-204ENST00000490751 GSTM1P09488 218 aa30.55■■■□□ 2.48
LDB1-204ENST00000490751 ADRA1DP25100 572 aa30.55■■■□□ 2.48
LDB1-204ENST00000490751 PDHA2P29803 388 aa30.55■■■□□ 2.48
LDB1-204ENST00000490751 PREPP48147 710 aa30.55■■■□□ 2.48
LDB1-204ENST00000490751 ARCN1P48444 511 aaKnown RBP30.55■■■□□ 2.48
LDB1-204ENST00000490751 GSTM4Q03013 218 aa30.55■■■□□ 2.48
LDB1-204ENST00000490751 CYB5D1Q6P9G0 228 aa30.55■■■□□ 2.48
LDB1-204ENST00000490751 ZNF449Q6P9G9 518 aa30.55■■■□□ 2.48
LDB1-204ENST00000490751 ACVR1CQ8NER5 493 aa30.55■■■□□ 2.48
LDB1-204ENST00000490751 MAIP1Q8WWC4 291 aa30.55■■■□□ 2.48
LDB1-204ENST00000490751 HDAC10Q969S8 669 aa30.55■■■□□ 2.48
LDB1-204ENST00000490751 TBRG4Q969Z0 631 aaKnown RBP eCLIP30.55■■■□□ 2.48
LDB1-204ENST00000490751 SLC45A3Q96JT2 553 aa30.55■■■□□ 2.48
LDB1-204ENST00000490751 RIMKLBQ9ULI2 386 aa30.55■■■□□ 2.48
LDB1-204ENST00000490751 DRG1Q9Y295 367 aaKnown RBP30.55■■■□□ 2.48
LDB1-204ENST00000490751 ZKSCAN5Q9Y2L8 839 aa30.55■■■□□ 2.48
LDB1-204ENST00000490751 PPP2R2CQ9Y2T4 447 aa30.55■■■□□ 2.48
LDB1-204ENST00000490751 COL6A6A6NMZ7 2263 aa30.55■■■□□ 2.48
LDB1-204ENST00000490751 ZNF891A8MT65 544 aaPredicted RBP30.54■■■□□ 2.48
LDB1-204ENST00000490751 KIAA0754O94854 1291 aa30.54■■■□□ 2.48
LDB1-204ENST00000490751 STAT5AP42229 794 aa30.54■■■□□ 2.48
LDB1-204ENST00000490751 ARL4DP49703 201 aa30.54■■■□□ 2.48
LDB1-204ENST00000490751 RPA4Q13156 261 aa30.54■■■□□ 2.48
LDB1-204ENST00000490751 TUBB3Q13509 450 aa30.54■■■□□ 2.48
LDB1-204ENST00000490751 KCNAB1Q14722 419 aa30.54■■■□□ 2.48
LDB1-204ENST00000490751 AFTPHQ6ULP2 937 aa30.54■■■□□ 2.48
LDB1-204ENST00000490751 PACS1Q6VY07 963 aa30.54■■■□□ 2.48
LDB1-204ENST00000490751 PPP1R3BQ86XI6 285 aa30.54■■■□□ 2.48
LDB1-204ENST00000490751 KMT5CQ86Y97 462 aa30.54■■■□□ 2.48
LDB1-204ENST00000490751 OR4E2Q8NGC2 313 aa30.54■■■□□ 2.48
LDB1-204ENST00000490751 ZNF778Q96MU6 729 aa30.54■■■□□ 2.48
LDB1-204ENST00000490751 EFHD1Q9BUP0 239 aa30.54■■■□□ 2.48
LDB1-204ENST00000490751 TCAF1Q9Y4C2 921 aa30.54■■■□□ 2.48
LDB1-204ENST00000490751 PIEZO2Q9H5I5 2752 aa30.53■■■□□ 2.48
LDB1-204ENST00000490751 QSOX1O00391 747 aa30.53■■■□□ 2.48
LDB1-204ENST00000490751 CEP104O60308 925 aa30.53■■■□□ 2.48
LDB1-204ENST00000490751 SPAG6O75602 509 aa30.53■■■□□ 2.48
LDB1-204ENST00000490751 GOT2P00505 430 aaKnown RBP30.53■■■□□ 2.48
LDB1-204ENST00000490751 FOLR1P15328 257 aa30.53■■■□□ 2.48
LDB1-204ENST00000490751 CD151P48509 253 aa30.53■■■□□ 2.48
LDB1-204ENST00000490751 LARP7Q4G0J3 582 aaKnown RBP eCLIP30.53■■■□□ 2.482e-7■□□□□ 8.7
LDB1-204ENST00000490751 C6orf15Q6UXA7 325 aaPredicted RBP30.53■■■□□ 2.48
LDB1-204ENST00000490751 CERS6Q6ZMG9 384 aa30.53■■■□□ 2.48
LDB1-204ENST00000490751 GALNT6Q8NCL4 622 aa30.53■■■□□ 2.48
LDB1-204ENST00000490751 PDE7BQ9NP56 450 aa30.53■■■□□ 2.48
LDB1-204ENST00000490751 IL17BQ9UHF5 180 aa30.53■■■□□ 2.48
LDB1-204ENST00000490751 LNPEPQ9UIQ6 1025 aa30.53■■■□□ 2.48
LDB1-204ENST00000490751 CFAP46Q8IYW2 2715 aa30.52■■■□□ 2.48
LDB1-204ENST00000490751 EBLN1P0CF75 366 aa30.52■■■□□ 2.48
LDB1-204ENST00000490751 POLR2CP19387 275 aaPredicted RBP30.52■■■□□ 2.48
LDB1-204ENST00000490751 CXCR5P32302 372 aa30.52■■■□□ 2.48
LDB1-204ENST00000490751 KPNA2P52292 529 aaKnown RBP30.52■■■□□ 2.48
LDB1-204ENST00000490751 ACVR1Q04771 509 aa30.52■■■□□ 2.48
LDB1-204ENST00000490751 PRKAA1Q13131 559 aa30.52■■■□□ 2.48
LDB1-204ENST00000490751 GSTA5Q7RTV2 222 aa30.52■■■□□ 2.48
LDB1-204ENST00000490751 LCN9Q8WX39 176 aa30.52■■■□□ 2.48
LDB1-204ENST00000490751 RARRES3Q9UL19 164 aa30.52■■■□□ 2.48
LDB1-204ENST00000490751 RPS6KL1Q9Y6S9 549 aa30.52■■■□□ 2.48
LDB1-204ENST00000490751 FTH1P02794 183 aa30.51■■■□□ 2.47
LDB1-204ENST00000490751 FAM87AP0C7U9 286 aa30.51■■■□□ 2.47
LDB1-204ENST00000490751 KCNJ1P48048 391 aa30.51■■■□□ 2.47
LDB1-204ENST00000490751 HSD11B2P80365 405 aa30.51■■■□□ 2.47
LDB1-204ENST00000490751 BASP1P80723 227 aaKnown RBP30.51■■■□□ 2.47
LDB1-204ENST00000490751 ACY1Q03154 408 aa30.51■■■□□ 2.47
LDB1-204ENST00000490751 LYPLAL1Q5VWZ2 237 aa30.51■■■□□ 2.47
LDB1-204ENST00000490751 NLRP9Q7RTR0 991 aa30.51■■■□□ 2.47
LDB1-204ENST00000490751 ZNF605Q86T29 641 aa30.51■■■□□ 2.47
LDB1-204ENST00000490751 PHC3Q8NDX5 983 aa30.51■■■□□ 2.47
LDB1-204ENST00000490751 PPHLN1Q8NEY8 458 aaKnown RBP30.51■■■□□ 2.47
LDB1-204ENST00000490751 OR6P1Q8NGX9 317 aa30.51■■■□□ 2.47
LDB1-204ENST00000490751 ELMO1Q92556 727 aa30.51■■■□□ 2.47
LDB1-204ENST00000490751 STAMBPL1Q96FJ0 436 aa30.51■■■□□ 2.47
LDB1-204ENST00000490751 SRMSQ9H3Y6 488 aa30.51■■■□□ 2.47
LDB1-204ENST00000490751 MVB12BQ9H7P6 319 aa30.51■■■□□ 2.47
LDB1-204ENST00000490751 EIF2B3Q9NR50 452 aaKnown RBP30.51■■■□□ 2.47
LDB1-204ENST00000490751 GOLGA6L3A6NEY3 463 aa30.5■■■□□ 2.47
LDB1-204ENST00000490751 LIN7AO14910 233 aaPredicted RBP30.5■■■□□ 2.47
LDB1-204ENST00000490751 NKX2-8O15522 239 aa30.5■■■□□ 2.47
LDB1-204ENST00000490751 TIAF1O95411 115 aa30.5■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms