RNA–Protein interactions for RNA: ENST00000490546.1

PUM1-210, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-210	ENST00000490546	ACAP2	Q15057	778 aa		10.14	□□□□□ -0.79
PUM1-210	ENST00000490546	TCEA2	Q15560	299 aa		10.14	□□□□□ -0.79
PUM1-210	ENST00000490546	TRIM61	Q5EBN2	209 aa		10.14	□□□□□ -0.79
PUM1-210	ENST00000490546	PEAR1	Q5VY43	1037 aa	Predicted RBP	10.14	□□□□□ -0.79
PUM1-210	ENST00000490546	SLC23A3	Q6PIS1	610 aa		10.14	□□□□□ -0.79
PUM1-210	ENST00000490546	SLC30A9	Q6PML9	568 aa		10.14	□□□□□ -0.79
PUM1-210	ENST00000490546	SDR16C5	Q8N3Y7	309 aa		10.14	□□□□□ -0.79
PUM1-210	ENST00000490546	CCDC63	Q8NA47	563 aa		10.14	□□□□□ -0.79
PUM1-210	ENST00000490546	CFAP61	Q8NHU2	1237 aa		10.14	□□□□□ -0.79
PUM1-210	ENST00000490546	GPBAR1	Q8TDU6	330 aa		10.14	□□□□□ -0.79
PUM1-210	ENST00000490546	LMX1A	Q8TE12	382 aa		10.14	□□□□□ -0.79
PUM1-210	ENST00000490546	KCTD4	Q8WVF5	259 aa		10.14	□□□□□ -0.79
PUM1-210	ENST00000490546	GLMN	Q92990	594 aa		10.14	□□□□□ -0.79
PUM1-210	ENST00000490546	NXNL1	Q96CM4	212 aa		10.14	□□□□□ -0.79
PUM1-210	ENST00000490546	TLCD1	Q96CP7	247 aa		10.14	□□□□□ -0.79
PUM1-210	ENST00000490546	PDLIM5	Q96HC4	596 aa	Known RBP	10.14	□□□□□ -0.79
PUM1-210	ENST00000490546	APOPT1	Q96IL0	206 aa		10.14	□□□□□ -0.79
PUM1-210	ENST00000490546	SLC30A3	Q99726	388 aa		10.14	□□□□□ -0.79
PUM1-210	ENST00000490546	TRIM54	Q9BYV2	358 aa		10.14	□□□□□ -0.79
PUM1-210	ENST00000490546	DERL2	Q9GZP9	239 aa		10.14	□□□□□ -0.79
PUM1-210	ENST00000490546	SSU72	Q9NP77	194 aa	Known RBP	10.14	□□□□□ -0.79
PUM1-210	ENST00000490546	NKIRAS1	Q9NYS0	192 aa		10.14	□□□□□ -0.79
PUM1-210	ENST00000490546	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	10.14	□□□□□ -0.79
PUM1-210	ENST00000490546	MED16	Q9Y2X0	877 aa		10.14	□□□□□ -0.79
PUM1-210	ENST00000490546	PLEKHM1	Q9Y4G2	1056 aa		10.14	□□□□□ -0.79
PUM1-210	ENST00000490546	SNX11	Q9Y5W9	270 aa		10.14	□□□□□ -0.79
PUM1-210	ENST00000490546	MUC6	Q6W4X9	2439 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	GPR179	Q6PRD1	2367 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	CCDC189	A1A4V9	331 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	NEMP2	A6NFY4	417 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	BTN3A1	O00481	513 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	AQP9	O43315	295 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	ZBTB14	O43829	449 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	CER1	O95813	267 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	SYF2	O95926	243 aa	Known RBP	10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	S100B	P04271	92 aa	Predicted RBP	10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	C8G	P07360	202 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	RET	P07949	1114 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	ANXA6	P08133	673 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	TFEB	P19484	476 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	HIST1H2AD	P20671	130 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	CYP2A7	P20853	494 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	AK4	P27144	223 aa	Predicted RBP	10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	RPL10	P27635	214 aa	Known RBP	10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	MAP4	P27816	1152 aa	Known RBP	10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	HPD	P32754	393 aa	Predicted RBP	10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	CCNF	P41002	786 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	RXRG	P48443	463 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	IRF9	Q00978	393 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	C1orf61	Q13536	156 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	CCDC153	Q494R4	210 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	TTMP	Q5BVD1	217 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	TNFAIP8L3	Q5GJ75	292 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	PRAMEF14	Q5SWL7	426 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	TMEM207	Q6UWW9	146 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	FRA10AC1	Q70Z53	315 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	SLC22A15	Q8IZD6	547 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	SPATA6L	Q8N4H0	392 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	BANP	Q8N9N5	519 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	FAM46D	Q8NEK8	389 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	PRSS33	Q8NF86	280 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	GIMAP7	Q8NHV1	300 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	STAG3L4	Q8TBR4	150 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	MAGEC3	Q8TD91	643 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	MCOLN3	Q8TDD5	553 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	ANKRD49	Q8WVL7	239 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	SREK1	Q8WXA9	508 aa	Known RBP	10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	HIST1H2AH	Q96KK5	128 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	UBXN10	Q96LJ8	280 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	ELF4	Q99607	663 aa	Predicted RBP	10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	HIST1H2AJ	Q99878	128 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	MRPL57	Q9BQC6	102 aa	Known RBP	10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	SELENOS	Q9BQE4	189 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	H2AFJ	Q9BTM1	129 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	WWP1	Q9H0M0	922 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	TCEAL2	Q9H3H9	227 aa	Predicted RBP	10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	MID2	Q9UJV3	735 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	RNF112	Q9ULX5	631 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	PSMD13	Q9UNM6	376 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	HEBP2	Q9Y5Z4	205 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	LRP4	O75096	1905 aa		10.13	□□□□□ -0.79
PUM1-210	ENST00000490546	ADAMTS9	Q9P2N4	1935 aa		10.12	□□□□□ -0.79
PUM1-210	ENST00000490546	OR5K4	A6NMS3	321 aa		10.12	□□□□□ -0.79
PUM1-210	ENST00000490546	SYCE1L	A8MT33	242 aa		10.12	□□□□□ -0.79
PUM1-210	ENST00000490546	ARHGAP33	O14559	1287 aa		10.12	□□□□□ -0.79
PUM1-210	ENST00000490546	SLC16A5	O15375	505 aa		10.12	□□□□□ -0.79
PUM1-210	ENST00000490546	PRPF4	O43172	522 aa	Known RBP eCLIP	10.12	□□□□□ -0.79
PUM1-210	ENST00000490546	KDM1A	O60341	852 aa		10.12	□□□□□ -0.79
PUM1-210	ENST00000490546	ZWINT	O95229	277 aa		10.12	□□□□□ -0.79
PUM1-210	ENST00000490546	CAT	P04040	527 aa	Known RBP	10.12	□□□□□ -0.79
PUM1-210	ENST00000490546	ALPPL2	P10696	532 aa		10.12	□□□□□ -0.79
PUM1-210	ENST00000490546	CD1D	P15813	335 aa		10.12	□□□□□ -0.79
PUM1-210	ENST00000490546	TAC1	P20366	129 aa		10.12	□□□□□ -0.79
PUM1-210	ENST00000490546	PDHA2	P29803	388 aa		10.12	□□□□□ -0.79
PUM1-210	ENST00000490546	GLRB	P48167	497 aa		10.12	□□□□□ -0.79
PUM1-210	ENST00000490546	TCF15	Q12870	199 aa		10.12	□□□□□ -0.79
PUM1-210	ENST00000490546	GRIK2	Q13002	908 aa		10.12	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms