RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, human

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSX2IP-208	ENST00000490476	BEST2	Q8NFU1	509 aa		4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	PRSS3P2	Q8NHM4	247 aa		4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	GPT2	Q8TD30	523 aa		4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	SLC35F5	Q8WV83	523 aa		4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	SGCD	Q92629	289 aa		4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	NELL1	Q92832	810 aa		4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	TEKT1	Q969V4	418 aa		4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	ERGIC1	Q969X5	290 aa		4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	OTULIN	Q96BN8	352 aa		4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	MSI2	Q96DH6	328 aa	Known RBP	4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	RRNAD1	Q96FB5	475 aa	Known RBP	4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	GCNA	Q96QF7	691 aa		4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	OR2A14	Q96R47	310 aa		4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	THUMPD2	Q9BTF0	503 aa	Known RBP	4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	NDST4	Q9H3R1	872 aa		4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	MAP6D1	Q9H9H5	199 aa		4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	DDX4	Q9NQI0	724 aa	Known RBP	4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	ARHGEF38	Q9NXL2	777 aa		4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	TAB2	Q9NYJ8	693 aa		4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	ERVK-11	Q9UQG0	969 aa		4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476	ATG2B	Q96BY7	2078 aa		4.88	□□□□□ -1.63
SSX2IP-208	ENST00000490476		A0A0G2JK05	382 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	OR2A25	A4D2G3	310 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	TMEM202	A6NGA9	273 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	WIPF3	A6NGB9	483 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	KDM4E	B2RXH2	506 aa	Predicted RBP	4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	CYR61	O00622	381 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	VCY	O14598	125 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	ZC3H11A	O75152	810 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	GPC4	O75487	556 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	MMP1	P03956	469 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	IQCF3	P0C7M6	154 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	GLUL	P15104	373 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	CHRNB2	P17787	502 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	CTNNB1	P35222	781 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	PIGA	P37287	484 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	ABCG1	P45844	678 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	HSD17B4	P51659	736 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	CDC16	Q13042	620 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	MTX1	Q13505	466 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	ITGA7	Q13683	1181 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	PCLAF	Q15004	111 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	USP41	Q3LFD5	358 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	MMEL1	Q495T6	779 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476		Q4G0T1	1027 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	ASPHD1	Q5U4P2	390 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	GARNL3	Q5VVW2	1013 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	NUGGC	Q68CJ6	796 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	RPUSD3	Q6P087	351 aa	Known RBP	4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	SLC16A12	Q6ZSM3	486 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	SEPT14	Q6ZU15	432 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	ADGRD2	Q7Z7M1	963 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	KBTBD6	Q86V97	674 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	DNAAF5	Q86Y56	855 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	IL17RC	Q8NAC3	791 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	TDRD5	Q8NAT2	981 aa	Known RBP	4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	AVL9	Q8NBF6	648 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	PRPF31	Q8WWY3	499 aa	Known RBP	4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	SNAPC3	Q92966	411 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	IGSF8	Q969P0	613 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	HARBI1	Q96MB7	349 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	ZMAT2	Q96NC0	199 aa	Known RBP	4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	SLITRK1	Q96PX8	696 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	PAFAH2	Q99487	392 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	BAG1	Q99933	345 aa	Predicted RBP	4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	WDR77	Q9BQA1	342 aa	Predicted RBP	4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	MSTO1	Q9BUK6	570 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	HRH4	Q9H3N8	390 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	KLHL31	Q9H511	634 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	GIMAP4	Q9NUV9	329 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	GIMAP2	Q9UG22	337 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	ZNF711	Q9Y462	761 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	SCN10A	Q9Y5Y9	1956 aa		4.87	□□□□□ -1.63
SSX2IP-208	ENST00000490476	NBAS	A2RRP1	2371 aa		4.86	□□□□□ -1.63
SSX2IP-208	ENST00000490476	CELSR2	Q9HCU4	2923 aa		4.86	□□□□□ -1.63
SSX2IP-208	ENST00000490476	CDRT15L2	A8MXV6	281 aa		4.86	□□□□□ -1.63
SSX2IP-208	ENST00000490476	ZNF814	B7Z6K7	855 aa		4.86	□□□□□ -1.63
SSX2IP-208	ENST00000490476		F5H6K3	240 aa		4.86	□□□□□ -1.63
SSX2IP-208	ENST00000490476	DUSP11	O75319	330 aa	Known RBP	4.86	□□□□□ -1.63
SSX2IP-208	ENST00000490476	NDUFB8	O95169	186 aa		4.86	□□□□□ -1.63
SSX2IP-208	ENST00000490476	SLPI	P03973	132 aa		4.86	□□□□□ -1.63
SSX2IP-208	ENST00000490476	ANXA7	P20073	488 aa	Known RBP	4.86	□□□□□ -1.63
SSX2IP-208	ENST00000490476	PON1	P27169	355 aa		4.86	□□□□□ -1.63
SSX2IP-208	ENST00000490476	STAT2	P52630	851 aa		4.86	□□□□□ -1.63
SSX2IP-208	ENST00000490476	P2RX3	P56373	397 aa		4.86	□□□□□ -1.63
SSX2IP-208	ENST00000490476	TFAP4	Q01664	338 aa		4.86	□□□□□ -1.63
SSX2IP-208	ENST00000490476	POU5F1	Q01860	360 aa	Known RBP	4.86	□□□□□ -1.63
SSX2IP-208	ENST00000490476	AIMP1	Q12904	312 aa	Known RBP	4.86	□□□□□ -1.63
SSX2IP-208	ENST00000490476	LAMB3	Q13751	1172 aa		4.86	□□□□□ -1.63
SSX2IP-208	ENST00000490476	SHB	Q15464	509 aa		4.86	□□□□□ -1.63
SSX2IP-208	ENST00000490476	ADIPOQ	Q15848	244 aa		4.86	□□□□□ -1.63
SSX2IP-208	ENST00000490476	TMEM198	Q66K66	360 aa		4.86	□□□□□ -1.63
SSX2IP-208	ENST00000490476	CFAP77	Q6ZQR2	320 aa		4.86	□□□□□ -1.63
SSX2IP-208	ENST00000490476	TRIL	Q7L0X0	811 aa		4.86	□□□□□ -1.63
SSX2IP-208	ENST00000490476	LINGO2	Q7L985	606 aa		4.86	□□□□□ -1.63
SSX2IP-208	ENST00000490476	KRT74	Q7RTS7	529 aa		4.86	□□□□□ -1.63
SSX2IP-208	ENST00000490476	WDR63	Q8IWG1	891 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms